RNA–Protein interactions for RNA: ENST00000458268.5

USP39-209, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 751 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-209ENST00000458268 KIF20BQ96Q89 1820 aa25.93■■□□□ 1.74
USP39-209ENST00000458268 ARHGEF25Q86VW2 580 aa25.93■■□□□ 1.74
USP39-209ENST00000458268 COG3Q96JB2 828 aa25.93■■□□□ 1.74
USP39-209ENST00000458268 TOM1L2Q6ZVM7 507 aa25.92■■□□□ 1.74
USP39-209ENST00000458268 KRT27Q7Z3Y8 459 aa25.92■■□□□ 1.74
USP39-209ENST00000458268 OVOS2A0A0J9YW53 1432 aa25.91■■□□□ 1.74
USP39-209ENST00000458268 OVOS2Q6IE36 1432 aa25.91■■□□□ 1.74
USP39-209ENST00000458268 GGNBP2Q9H3C7 697 aa25.91■■□□□ 1.74
USP39-209ENST00000458268 AXIN2Q9Y2T1 843 aa25.91■■□□□ 1.74
USP39-209ENST00000458268 NSD3Q9BZ95 1437 aa25.89■■□□□ 1.74
USP39-209ENST00000458268 FAM182BQ5T319 152 aa25.89■■□□□ 1.74
USP39-209ENST00000458268 THSD7AQ9UPZ6 1657 aa25.89■■□□□ 1.73
USP39-209ENST00000458268 ONECUT3O60422 494 aaPredicted RBP25.88■■□□□ 1.73
USP39-209ENST00000458268 CRB1P82279 1406 aa25.88■■□□□ 1.73
USP39-209ENST00000458268 TCP11L2Q8N4U5 519 aa25.87■■□□□ 1.73
USP39-209ENST00000458268 FBLN1P23142 703 aa25.86■■□□□ 1.73
USP39-209ENST00000458268 WDR17Q8IZU2 1322 aa25.84■■□□□ 1.73
USP39-209ENST00000458268 FYB1O15117 783 aa25.83■■□□□ 1.73
USP39-209ENST00000458268 CARD14Q9BXL6 1004 aa25.83■■□□□ 1.73
USP39-209ENST00000458268 LTV1Q96GA3 475 aaPredicted RBP25.82■■□□□ 1.72
USP39-209ENST00000458268 C11orf95C9JLR9 678 aaPredicted RBP25.81■■□□□ 1.72
USP39-209ENST00000458268 WNK3Q9BYP7 1800 aa25.8■■□□□ 1.72
USP39-209ENST00000458268 AMPHP49418 695 aa25.8■■□□□ 1.72
USP39-209ENST00000458268 PDE3BQ13370 1112 aa25.8■■□□□ 1.72
USP39-209ENST00000458268 BARGINQ6ZT62 677 aa25.8■■□□□ 1.72
USP39-209ENST00000458268 NLRP2Q9NX02 1062 aa25.8■■□□□ 1.72
USP39-209ENST00000458268 ABCC6O95255 1503 aa25.79■■□□□ 1.72
USP39-209ENST00000458268 SF3B2Q13435 895 aaKnown RBP25.79■■□□□ 1.72
USP39-209ENST00000458268 RRS1Q15050 365 aaKnown RBP25.79■■□□□ 1.72
USP39-209ENST00000458268 ANKRD24Q8TF21 1146 aa25.78■■□□□ 1.72
USP39-209ENST00000458268 THRAP3Q9Y2W1 955 aaKnown RBP25.78■■□□□ 1.72
USP39-209ENST00000458268 MAP3K19Q56UN5 1328 aa25.78■■□□□ 1.72
USP39-209ENST00000458268 PANK3Q9H999 370 aa25.76■■□□□ 1.71
USP39-209ENST00000458268 PARP4Q9UKK3 1724 aaKnown RBP25.76■■□□□ 1.71
USP39-209ENST00000458268 BLMP54132 1417 aaPredicted RBP25.75■■□□□ 1.71
USP39-209ENST00000458268 ERBB3P21860 1342 aa25.75■■□□□ 1.71
USP39-209ENST00000458268 CGNL1Q0VF96 1302 aa25.75■■□□□ 1.71
USP39-209ENST00000458268 LRRC37A3O60309 1634 aa25.74■■□□□ 1.71
USP39-209ENST00000458268 IP6K1Q92551 441 aa25.73■■□□□ 1.71
USP39-209ENST00000458268 CARD10Q9BWT7 1032 aa25.73■■□□□ 1.71
USP39-209ENST00000458268 EP400Q96L91 3159 aa25.73■■□□□ 1.71
USP39-209ENST00000458268 KIF7Q2M1P5 1343 aa25.72■■□□□ 1.71
USP39-209ENST00000458268 HOXC9P31274 260 aa25.71■■□□□ 1.71
USP39-209ENST00000458268 TNNT2P45379 298 aaPredicted RBP25.71■■□□□ 1.71
USP39-209ENST00000458268 DDB1Q16531 1140 aa25.71■■□□□ 1.71
USP39-209ENST00000458268 DEFB132Q7Z7B7 95 aa25.71■■□□□ 1.71
USP39-209ENST00000458268 CCDC125Q86Z20 511 aa25.71■■□□□ 1.71
USP39-209ENST00000458268 RGPD2P0DJD1 1756 aa25.71■■□□□ 1.71
USP39-209ENST00000458268 RGPD1P0DJD0 1748 aa25.71■■□□□ 1.71
USP39-209ENST00000458268 CCDC7Q96M83 1385 aa25.7■■□□□ 1.71
USP39-209ENST00000458268 PPM1GO15355 546 aaPredicted RBP25.7■■□□□ 1.7
USP39-209ENST00000458268 ANKRD26Q9UPS8 1709 aa25.69■■□□□ 1.7
USP39-209ENST00000458268 FAM208AQ9UK61 1670 aaKnown RBP25.68■■□□□ 1.7
USP39-209ENST00000458268 TRIM37O94972 964 aa25.67■■□□□ 1.7
USP39-209ENST00000458268 FAM196AQ6ZSG2 479 aa25.67■■□□□ 1.7
USP39-209ENST00000458268 PEAK1Q9H792 1746 aa25.67■■□□□ 1.7
USP39-209ENST00000458268 MAP2P11137 1827 aaKnown RBP25.66■■□□□ 1.7
USP39-209ENST00000458268 EMILIN1Q9Y6C2 1016 aa25.66■■□□□ 1.7
USP39-209ENST00000458268 RTL1A6NKG5 1358 aa25.66■■□□□ 1.7
USP39-209ENST00000458268 CDCA7Q9BWT1 371 aaPredicted RBP25.65■■□□□ 1.7
USP39-209ENST00000458268 TNS1Q9HBL0 1735 aaKnown RBP25.64■■□□□ 1.7
USP39-209ENST00000458268 BAG6P46379 1132 aa25.64■■□□□ 1.7
USP39-209ENST00000458268 CNGB1Q14028 1251 aaPredicted RBP25.64■■□□□ 1.7
USP39-209ENST00000458268 KNSTRNQ9Y448 316 aa25.64■■□□□ 1.7
USP39-209ENST00000458268 SMG6Q86US8 1419 aaKnown RBP25.63■■□□□ 1.69
USP39-209ENST00000458268 DISP2A7MBM2 1401 aa25.63■■□□□ 1.69
USP39-209ENST00000458268 EXOC5O00471 708 aa25.62■■□□□ 1.69
USP39-209ENST00000458268 IL2RBP14784 551 aa25.62■■□□□ 1.69
USP39-209ENST00000458268 HSP90AB2PQ58FF8 381 aa25.62■■□□□ 1.69
USP39-209ENST00000458268 USHBP1Q8N6Y0 703 aa25.62■■□□□ 1.69
USP39-209ENST00000458268 OVOS2A0A0G2JMS6 1433 aa25.62■■□□□ 1.69
USP39-209ENST00000458268 FLT4P35916 1363 aa25.61■■□□□ 1.69
USP39-209ENST00000458268 EN1Q05925 392 aaPredicted RBP25.6■■□□□ 1.69
USP39-209ENST00000458268 TNS2Q63HR2 1409 aa25.58■■□□□ 1.69
USP39-209ENST00000458268 APBA3O96018 575 aa25.58■■□□□ 1.69
USP39-209ENST00000458268 MORC1Q86VD1 984 aa25.58■■□□□ 1.69
USP39-209ENST00000458268 MARCH10Q8NA82 808 aaPredicted RBP25.58■■□□□ 1.69
USP39-209ENST00000458268 KAT6BQ8WYB5 2073 aa25.57■■□□□ 1.68
USP39-209ENST00000458268 WASHC2AQ641Q2 1341 aa25.57■■□□□ 1.68
USP39-209ENST00000458268 SBF2Q86WG5 1849 aa25.56■■□□□ 1.68
USP39-209ENST00000458268 INSRP06213 1382 aa25.56■■□□□ 1.68
USP39-209ENST00000458268 NBPF6Q5VWK0 638 aa25.55■■□□□ 1.68
USP39-209ENST00000458268 NBPF4Q96M43 638 aa25.55■■□□□ 1.68
USP39-209ENST00000458268 NSD2O96028 1365 aa25.55■■□□□ 1.68
USP39-209ENST00000458268 DDX54Q8TDD1 881 aaKnown RBP25.53■■□□□ 1.68
USP39-209ENST00000458268 POLKQ9UBT6 870 aa25.53■■□□□ 1.68
USP39-209ENST00000458268 EZH2Q15910 746 aaKnown RBP25.52■■□□□ 1.68
USP39-209ENST00000458268 KIF24Q5T7B8 1368 aa25.52■■□□□ 1.68
USP39-209ENST00000458268 CC2D1BQ5T0F9 858 aaKnown RBP25.51■■□□□ 1.67
USP39-209ENST00000458268 ACSBG1Q96GR2 724 aa25.51■■□□□ 1.67
USP39-209ENST00000458268 MEGF6O75095 1541 aa25.5■■□□□ 1.67
USP39-209ENST00000458268 RAPGEF4Q8WZA2 1011 aa25.5■■□□□ 1.67
USP39-209ENST00000458268 PTF1AQ7RTS3 328 aa25.48■■□□□ 1.67
USP39-209ENST00000458268 TATP17735 454 aaPredicted RBP25.47■■□□□ 1.67
USP39-209ENST00000458268 AMER1Q5JTC6 1135 aaPredicted RBP25.46■■□□□ 1.67
USP39-209ENST00000458268 SHANK3Q9BYB0 1731 aa25.44■■□□□ 1.66
USP39-209ENST00000458268 ZCRB1Q8TBF4 217 aaKnown RBP25.44■■□□□ 1.66
USP39-209ENST00000458268 PSDA5PKW4 1024 aaPredicted RBP25.43■■□□□ 1.66
USP39-209ENST00000458268 CAMKK2Q96RR4 588 aa25.43■■□□□ 1.66
USP39-209ENST00000458268 NHSQ6T4R5 1651 aa25.42■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms