RNA–Protein interactions for RNA: ENST00000457373.5

RFX3-210, Transcript of regulatory factor X3, humanhuman

TSL 5

Gene RFX3, Length 822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-210ENST00000457373 ATRNO75882 1429 aa13.93□□□□□ -0.18
RFX3-210ENST00000457373 CARD14Q9BXL6 1004 aa13.93□□□□□ -0.18
RFX3-210ENST00000457373 STRN4Q9NRL3 753 aa13.93□□□□□ -0.18
RFX3-210ENST00000457373 EVA1CP58658 441 aa13.92□□□□□ -0.18
RFX3-210ENST00000457373 COG3Q96JB2 828 aa13.92□□□□□ -0.18
RFX3-210ENST00000457373 GJD4Q96KN9 370 aaPredicted RBP13.92□□□□□ -0.18
RFX3-210ENST00000457373 GGNBP2Q9H3C7 697 aa13.92□□□□□ -0.18
RFX3-210ENST00000457373 NRAPQ86VF7 1730 aa13.92□□□□□ -0.18
RFX3-210ENST00000457373 KIF7Q2M1P5 1343 aa13.91□□□□□ -0.18
RFX3-210ENST00000457373 NSD3Q9BZ95 1437 aa13.91□□□□□ -0.18
RFX3-210ENST00000457373 FYB1O15117 783 aa13.91□□□□□ -0.18
RFX3-210ENST00000457373 VPS72Q15906 364 aa13.91□□□□□ -0.18
RFX3-210ENST00000457373 PANK3Q9H999 370 aa13.91□□□□□ -0.18
RFX3-210ENST00000457373 KIF20BQ96Q89 1820 aa13.91□□□□□ -0.18
RFX3-210ENST00000457373 CPDO75976 1380 aa13.91□□□□□ -0.18
RFX3-210ENST00000457373 USP54Q70EL1 1684 aa13.91□□□□□ -0.18
RFX3-210ENST00000457373 RGPD5Q99666 1765 aa13.9□□□□□ -0.18
RFX3-210ENST00000457373 OVOS2A0A0J9YW53 1432 aa13.9□□□□□ -0.19
RFX3-210ENST00000457373 OVOS2Q6IE36 1432 aa13.9□□□□□ -0.19
RFX3-210ENST00000457373 CAMTA1Q9Y6Y1 1673 aa13.89□□□□□ -0.19
RFX3-210ENST00000457373 ARHGEF25Q86VW2 580 aa13.89□□□□□ -0.19
RFX3-210ENST00000457373 LMO7Q8WWI1 1683 aa13.88□□□□□ -0.19
RFX3-210ENST00000457373 GLI3P10071 1580 aa13.88□□□□□ -0.19
RFX3-210ENST00000457373 FBLN1P23142 703 aa13.88□□□□□ -0.19
RFX3-210ENST00000457373 NFAT5O94916 1531 aa13.88□□□□□ -0.19
RFX3-210ENST00000457373 LTN1O94822 1766 aa13.88□□□□□ -0.19
RFX3-210ENST00000457373 COL18A1P39060 1754 aa13.88□□□□□ -0.19
RFX3-210ENST00000457373 AATKQ6ZMQ8 1374 aa13.87□□□□□ -0.19
RFX3-210ENST00000457373 ZEB1P37275 1124 aaPredicted RBP13.87□□□□□ -0.19
RFX3-210ENST00000457373 AXIN2Q9Y2T1 843 aa13.87□□□□□ -0.19
RFX3-210ENST00000457373 RGS12O14924 1447 aa13.87□□□□□ -0.19
RFX3-210ENST00000457373 CCDC7Q96M83 1385 aa13.86□□□□□ -0.19
RFX3-210ENST00000457373 SOCS7O14512 581 aa13.86□□□□□ -0.19
RFX3-210ENST00000457373 LARP1Q6PKG0 1096 aaKnown RBP13.86□□□□□ -0.19
RFX3-210ENST00000457373 SPINK5Q9NQ38 1064 aaPredicted RBP13.86□□□□□ -0.19
RFX3-210ENST00000457373 USP35Q9P2H5 1018 aa13.86□□□□□ -0.19
RFX3-210ENST00000457373 CGNL1Q0VF96 1302 aa13.86□□□□□ -0.19
RFX3-210ENST00000457373 WASHC2AQ641Q2 1341 aa13.86□□□□□ -0.19
RFX3-210ENST00000457373 CDK12Q9NYV4 1490 aaPredicted RBP13.86□□□□□ -0.19
RFX3-210ENST00000457373 A0A0G2JS52 829 aa13.85□□□□□ -0.19
RFX3-210ENST00000457373 MYT1Q01538 1121 aa13.85□□□□□ -0.19
RFX3-210ENST00000457373 SPATA31A5Q5VU36 1347 aa13.85□□□□□ -0.19
RFX3-210ENST00000457373 SPATA31A7Q8IWB4 1347 aa13.85□□□□□ -0.19
RFX3-210ENST00000457373 CSB-PGBD3P0DP91 1061 aa13.84□□□□□ -0.19
RFX3-210ENST00000457373 FAM98CQ17RN3 349 aaKnown RBP13.84□□□□□ -0.19
RFX3-210ENST00000457373 COL5A2P05997 1499 aaPredicted RBP13.84□□□□□ -0.19
RFX3-210ENST00000457373 AMPHP49418 695 aa13.83□□□□□ -0.2
RFX3-210ENST00000457373 POLA2Q14181 598 aa13.83□□□□□ -0.2
RFX3-210ENST00000457373 RRS1Q15050 365 aaKnown RBP13.83□□□□□ -0.2
RFX3-210ENST00000457373 TOM1L2Q6ZVM7 507 aa13.83□□□□□ -0.2
RFX3-210ENST00000457373 SEPT12Q8IYM1 358 aa13.83□□□□□ -0.2
RFX3-210ENST00000457373 KNSTRNQ9Y448 316 aa13.83□□□□□ -0.2
RFX3-210ENST00000457373 SPATA31A1Q5TZJ5 1347 aa13.83□□□□□ -0.2
RFX3-210ENST00000457373 BRWD3Q6RI45 1802 aa13.82□□□□□ -0.2
RFX3-210ENST00000457373 MAP3K19Q56UN5 1328 aa13.82□□□□□ -0.2
RFX3-210ENST00000457373 ANKRD26Q9UPS8 1709 aa13.81□□□□□ -0.2
RFX3-210ENST00000457373 TNNT2P45379 298 aaPredicted RBP13.81□□□□□ -0.2
RFX3-210ENST00000457373 IP6K1Q92551 441 aa13.81□□□□□ -0.2
RFX3-210ENST00000457373 LTV1Q96GA3 475 aaPredicted RBP13.81□□□□□ -0.2
RFX3-210ENST00000457373 WDR17Q8IZU2 1322 aa13.81□□□□□ -0.2
RFX3-210ENST00000457373 CRB1P82279 1406 aa13.81□□□□□ -0.2
RFX3-210ENST00000457373 MAP2P11137 1827 aaKnown RBP13.8□□□□□ -0.2
RFX3-210ENST00000457373 ONECUT3O60422 494 aaPredicted RBP13.8□□□□□ -0.2
RFX3-210ENST00000457373 CNGB1Q14028 1251 aaPredicted RBP13.8□□□□□ -0.2
RFX3-210ENST00000457373 ANKRD24Q8TF21 1146 aa13.8□□□□□ -0.2
RFX3-210ENST00000457373 HOXC9P31274 260 aa13.79□□□□□ -0.2
RFX3-210ENST00000457373 MORC1Q86VD1 984 aa13.79□□□□□ -0.2
RFX3-210ENST00000457373 TCP11L2Q8N4U5 519 aa13.79□□□□□ -0.2
RFX3-210ENST00000457373 ABCC6O95255 1503 aa13.79□□□□□ -0.2
RFX3-210ENST00000457373 PPM1GO15355 546 aaPredicted RBP13.78□□□□□ -0.2
RFX3-210ENST00000457373 NLRP2Q9NX02 1062 aa13.78□□□□□ -0.2
RFX3-210ENST00000457373 THRAP3Q9Y2W1 955 aaKnown RBP13.78□□□□□ -0.2
RFX3-210ENST00000457373 EMILIN1Q9Y6C2 1016 aa13.78□□□□□ -0.2
RFX3-210ENST00000457373 PER1O15534 1290 aaPredicted RBP13.77□□□□□ -0.21
RFX3-210ENST00000457373 NSD2O96028 1365 aa13.77□□□□□ -0.21
RFX3-210ENST00000457373 ERBB3P21860 1342 aa13.77□□□□□ -0.21
RFX3-210ENST00000457373 BLMP54132 1417 aaPredicted RBP13.77□□□□□ -0.21
RFX3-210ENST00000457373 BARGINQ6ZT62 677 aa13.77□□□□□ -0.21
RFX3-210ENST00000457373 CC2D1BQ5T0F9 858 aaKnown RBP13.76□□□□□ -0.21
RFX3-210ENST00000457373 KRT27Q7Z3Y8 459 aa13.76□□□□□ -0.21
RFX3-210ENST00000457373 CARD10Q9BWT7 1032 aa13.76□□□□□ -0.21
RFX3-210ENST00000457373 RGPD2P0DJD1 1756 aa13.76□□□□□ -0.21
RFX3-210ENST00000457373 PEAK1Q9H792 1746 aa13.76□□□□□ -0.21
RFX3-210ENST00000457373 THSD7AQ9UPZ6 1657 aa13.75□□□□□ -0.21
RFX3-210ENST00000457373 HSP90AB2PQ58FF8 381 aa13.75□□□□□ -0.21
RFX3-210ENST00000457373 POLKQ9UBT6 870 aa13.75□□□□□ -0.21
RFX3-210ENST00000457373 RTL1A6NKG5 1358 aa13.74□□□□□ -0.21
RFX3-210ENST00000457373 FAM182BQ5T319 152 aa13.74□□□□□ -0.21
RFX3-210ENST00000457373 UPF1Q92900 1129 aaKnown RBP eCLIP13.74□□□□□ -0.21
RFX3-210ENST00000457373 WNK3Q9BYP7 1800 aa13.74□□□□□ -0.21
RFX3-210ENST00000457373 FLT4P35916 1363 aa13.73□□□□□ -0.21
RFX3-210ENST00000457373 PDE3BQ13370 1112 aa13.73□□□□□ -0.21
RFX3-210ENST00000457373 FAM208AQ9UK61 1670 aaKnown RBP13.72□□□□□ -0.21
RFX3-210ENST00000457373 INSRP06213 1382 aa13.71□□□□□ -0.21
RFX3-210ENST00000457373 KIF24Q5T7B8 1368 aa13.71□□□□□ -0.21
RFX3-210ENST00000457373 PARP4Q9UKK3 1724 aaKnown RBP13.71□□□□□ -0.21
RFX3-210ENST00000457373 DDB1Q16531 1140 aa13.71□□□□□ -0.21
RFX3-210ENST00000457373 SMG6Q86US8 1419 aaKnown RBP13.71□□□□□ -0.22
RFX3-210ENST00000457373 EXOC5O00471 708 aa13.7□□□□□ -0.22
RFX3-210ENST00000457373 DDX10Q13206 875 aaKnown RBP13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 96.6 ms