RNA–Protein interactions for RNA: ENST00000454402.6

RFC5-204, Transcript of replication factor C subunit 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFC5, Length 1,655 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5-204ENST00000454402 RRS1Q15050 365 aaKnown RBP21.47■■□□□ 1.03
RFC5-204ENST00000454402 LARP1Q6PKG0 1096 aaKnown RBP21.47■■□□□ 1.03
RFC5-204ENST00000454402 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.46■■□□□ 1.03
RFC5-204ENST00000454402 USP54Q70EL1 1684 aa21.46■■□□□ 1.03
RFC5-204ENST00000454402 CSB-PGBD3P0DP91 1061 aa21.46■■□□□ 1.03
RFC5-204ENST00000454402 AATKQ6ZMQ8 1374 aa21.45■■□□□ 1.02
RFC5-204ENST00000454402 LMO7Q8WWI1 1683 aa21.44■■□□□ 1.02
RFC5-204ENST00000454402 LTV1Q96GA3 475 aaPredicted RBP21.44■■□□□ 1.02
RFC5-204ENST00000454402 AMPHP49418 695 aa21.44■■□□□ 1.02
RFC5-204ENST00000454402 FAM98CQ17RN3 349 aaKnown RBP21.44■■□□□ 1.02
RFC5-204ENST00000454402 RGS12O14924 1447 aa21.43■■□□□ 1.02
RFC5-204ENST00000454402 GLI3P10071 1580 aa21.43■■□□□ 1.02
RFC5-204ENST00000454402 COL5A2P05997 1499 aaPredicted RBP21.43■■□□□ 1.02
RFC5-204ENST00000454402 LTN1O94822 1766 aa21.43■■□□□ 1.02
RFC5-204ENST00000454402 PPM1GO15355 546 aaPredicted RBP21.43■■□□□ 1.02
RFC5-204ENST00000454402 MAP3K19Q56UN5 1328 aa21.42■■□□□ 1.02
RFC5-204ENST00000454402 TOM1L2Q6ZVM7 507 aa21.42■■□□□ 1.02
RFC5-204ENST00000454402 CC2D1BQ5T0F9 858 aaKnown RBP21.41■■□□□ 1.02
RFC5-204ENST00000454402 SPATA31A5Q5VU36 1347 aa21.41■■□□□ 1.02
RFC5-204ENST00000454402 SPATA31A7Q8IWB4 1347 aa21.41■■□□□ 1.02
RFC5-204ENST00000454402 RGPD5Q99666 1765 aa21.41■■□□□ 1.02
RFC5-204ENST00000454402 COL18A1P39060 1754 aa21.4■■□□□ 1.02
RFC5-204ENST00000454402 MORC1Q86VD1 984 aa21.4■■□□□ 1.02
RFC5-204ENST00000454402 EMILIN1Q9Y6C2 1016 aa21.39■■□□□ 1.01
RFC5-204ENST00000454402 SPATA31A1Q5TZJ5 1347 aa21.39■■□□□ 1.01
RFC5-204ENST00000454402 ANKRD24Q8TF21 1146 aa21.38■■□□□ 1.01
RFC5-204ENST00000454402 SEPT12Q8IYM1 358 aa21.37■■□□□ 1.01
RFC5-204ENST00000454402 HOXC9P31274 260 aa21.37■■□□□ 1.01
RFC5-204ENST00000454402 IP6K1Q92551 441 aa21.37■■□□□ 1.01
RFC5-204ENST00000454402 AMER1Q5JTC6 1135 aaPredicted RBP21.36■■□□□ 1.01
RFC5-204ENST00000454402 NLRP2Q9NX02 1062 aa21.36■■□□□ 1.01
RFC5-204ENST00000454402 WDR17Q8IZU2 1322 aa21.36■■□□□ 1.01
RFC5-204ENST00000454402 PER1O15534 1290 aaPredicted RBP21.35■■□□□ 1.01
RFC5-204ENST00000454402 CRB1P82279 1406 aa21.34■■□□□ 1.01
RFC5-204ENST00000454402 CDK12Q9NYV4 1490 aaPredicted RBP21.34■■□□□ 1.01
RFC5-204ENST00000454402 NSD2O96028 1365 aa21.34■■□□□ 1.01
RFC5-204ENST00000454402 TCP11L2Q8N4U5 519 aa21.34■■□□□ 1.01
RFC5-204ENST00000454402 ERBB3P21860 1342 aa21.33■■□□□ 1.01
RFC5-204ENST00000454402 ANKRD26Q9UPS8 1709 aa21.33■■□□□ 1
RFC5-204ENST00000454402 DDX10Q13206 875 aaKnown RBP21.33■■□□□ 1
RFC5-204ENST00000454402 HSP90AB2PQ58FF8 381 aa21.33■■□□□ 1
RFC5-204ENST00000454402 BLMP54132 1417 aaPredicted RBP21.31■■□□□ 1
RFC5-204ENST00000454402 PEAK1Q9H792 1746 aa21.31■■□□□ 1
RFC5-204ENST00000454402 POLKQ9UBT6 870 aa21.31■■□□□ 1
RFC5-204ENST00000454402 ABCC6O95255 1503 aa21.3■■□□□ 1
RFC5-204ENST00000454402 FAM182BQ5T319 152 aa21.3■■□□□ 1
RFC5-204ENST00000454402 SOCS7O14512 581 aa21.29■■□□□ 1
RFC5-204ENST00000454402 RTL1A6NKG5 1358 aa21.29■■□□□ 1
RFC5-204ENST00000454402 FLT4P35916 1363 aa21.29■■□□□ 1
RFC5-204ENST00000454402 USHBP1Q8N6Y0 703 aa21.28■■□□□ 1
RFC5-204ENST00000454402 CARD10Q9BWT7 1032 aa21.28■■□□□ 1
RFC5-204ENST00000454402 ONECUT3O60422 494 aaPredicted RBP21.27■■□□□ 1
RFC5-204ENST00000454402 KRT27Q7Z3Y8 459 aa21.27■■□□□ 1
RFC5-204ENST00000454402 THRAP3Q9Y2W1 955 aaKnown RBP21.27■■□□□ 1
RFC5-204ENST00000454402 SMG6Q86US8 1419 aaKnown RBP21.26■□□□□ 0.99
RFC5-204ENST00000454402 MAP2P11137 1827 aaKnown RBP21.26■□□□□ 0.99
RFC5-204ENST00000454402 BARGINQ6ZT62 677 aa21.26■□□□□ 0.99
RFC5-204ENST00000454402 BRWD3Q6RI45 1802 aa21.26■□□□□ 0.99
RFC5-204ENST00000454402 INSRP06213 1382 aa21.25■□□□□ 0.99
RFC5-204ENST00000454402 PDE3BQ13370 1112 aa21.24■□□□□ 0.99
RFC5-204ENST00000454402 THSD7AQ9UPZ6 1657 aa21.23■□□□□ 0.99
RFC5-204ENST00000454402 NBPF6Q5VWK0 638 aa21.23■□□□□ 0.99
RFC5-204ENST00000454402 NBPF4Q96M43 638 aa21.23■□□□□ 0.99
RFC5-204ENST00000454402 ZNF316A6NFI3 1004 aaPredicted RBP21.22■□□□□ 0.99
RFC5-204ENST00000454402 RGPD2P0DJD1 1756 aa21.21■□□□□ 0.99
RFC5-204ENST00000454402 MTHFSP49914 203 aa21.21■□□□□ 0.99
RFC5-204ENST00000454402 DDB1Q16531 1140 aa21.21■□□□□ 0.99
RFC5-204ENST00000454402 KIF24Q5T7B8 1368 aa21.2■□□□□ 0.98
RFC5-204ENST00000454402 IL2RBP14784 551 aa21.19■□□□□ 0.98
RFC5-204ENST00000454402 EIF4A2Q14240 407 aaKnown RBP21.19■□□□□ 0.98
RFC5-204ENST00000454402 NPC1L1Q9UHC9 1359 aa21.18■□□□□ 0.98
RFC5-204ENST00000454402 EXOC5O00471 708 aa21.17■□□□□ 0.98
RFC5-204ENST00000454402 UPF1Q92900 1129 aaKnown RBP eCLIP21.17■□□□□ 0.98
RFC5-204ENST00000454402 EP400Q96L91 3159 aa21.17■□□□□ 0.98
RFC5-204ENST00000454402 FAM208AQ9UK61 1670 aaKnown RBP21.17■□□□□ 0.98
RFC5-204ENST00000454402 WNK3Q9BYP7 1800 aa21.17■□□□□ 0.98
RFC5-204ENST00000454402 CDCA7Q9BWT1 371 aaPredicted RBP21.16■□□□□ 0.98
RFC5-204ENST00000454402 LRRC37A3O60309 1634 aa21.15■□□□□ 0.98
RFC5-204ENST00000454402 DISP2A7MBM2 1401 aa21.15■□□□□ 0.98
RFC5-204ENST00000454402 EYA1Q99502 592 aa21.15■□□□□ 0.98
RFC5-204ENST00000454402 PARP4Q9UKK3 1724 aaKnown RBP21.14■□□□□ 0.98
RFC5-204ENST00000454402 RAPGEF4Q8WZA2 1011 aa21.14■□□□□ 0.97
RFC5-204ENST00000454402 DDX54Q8TDD1 881 aaKnown RBP21.13■□□□□ 0.97
RFC5-204ENST00000454402 MEGF6O75095 1541 aa21.12■□□□□ 0.97
RFC5-204ENST00000454402 TATP17735 454 aaPredicted RBP21.12■□□□□ 0.97
RFC5-204ENST00000454402 PPP2R1AP30153 589 aa21.12■□□□□ 0.97
RFC5-204ENST00000454402 MARCH10Q8NA82 808 aaPredicted RBP21.12■□□□□ 0.97
RFC5-204ENST00000454402 TNS2Q63HR2 1409 aa21.1■□□□□ 0.97
RFC5-204ENST00000454402 TRIM37O94972 964 aa21.09■□□□□ 0.97
RFC5-204ENST00000454402 FAM196AQ6ZSG2 479 aa21.09■□□□□ 0.97
RFC5-204ENST00000454402 SF3B2Q13435 895 aaKnown RBP21.09■□□□□ 0.97
RFC5-204ENST00000454402 U2SURPO15042 1029 aaKnown RBP21.08■□□□□ 0.96
RFC5-204ENST00000454402 DIAPH1O60610 1272 aaKnown RBP21.08■□□□□ 0.96
RFC5-204ENST00000454402 IL13P35225 146 aa21.08■□□□□ 0.96
RFC5-204ENST00000454402 AEBP1Q8IUX7 1158 aa21.08■□□□□ 0.96
RFC5-204ENST00000454402 ZCRB1Q8TBF4 217 aaKnown RBP21.08■□□□□ 0.96
RFC5-204ENST00000454402 OVOS2A0A0G2JMS6 1433 aa21.07■□□□□ 0.96
RFC5-204ENST00000454402 SULT6B1Q6IMI4 303 aa21.06■□□□□ 0.96
RFC5-204ENST00000454402 ACSBG1Q96GR2 724 aa21.06■□□□□ 0.96
RFC5-204ENST00000454402 CFAP53Q96M91 514 aa21.06■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms