RNA–Protein interactions for RNA: ENST00000453960.6

MECP2-205, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 1 (best) BASIC

Gene MECP2, Length 1,729 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-205ENST00000453960 USP54Q70EL1 1684 aa23.32■■□□□ 1.32
MECP2-205ENST00000453960 DZIP1LQ8IYY4 767 aaKnown RBP23.32■■□□□ 1.32
MECP2-205ENST00000453960 PHACTR3Q96KR7 559 aa23.32■■□□□ 1.32
MECP2-205ENST00000453960 BCL2L13Q9BXK5 485 aa23.32■■□□□ 1.32
MECP2-205ENST00000453960 ZBTB47Q9UFB7 747 aaPredicted RBP23.32■■□□□ 1.32
MECP2-205ENST00000453960 ACEP12821 1306 aa23.31■■□□□ 1.32
MECP2-205ENST00000453960 ZNF853P0CG23 659 aa23.31■■□□□ 1.32
MECP2-205ENST00000453960 CALD1Q05682 793 aaKnown RBP23.31■■□□□ 1.32
MECP2-205ENST00000453960 PIK3R4Q99570 1358 aa23.3■■□□□ 1.32
MECP2-205ENST00000453960 NEFMP07197 916 aa23.3■■□□□ 1.32
MECP2-205ENST00000453960 THEMISQ8N1K5 641 aaPredicted RBP23.3■■□□□ 1.32
MECP2-205ENST00000453960 RGPD8O14715 1765 aaPredicted RBP23.29■■□□□ 1.32
MECP2-205ENST00000453960 TRIM27P14373 513 aa23.29■■□□□ 1.32
MECP2-205ENST00000453960 SMC4Q9NTJ3 1288 aa23.29■■□□□ 1.32
MECP2-205ENST00000453960 FMN2Q9NZ56 1722 aa23.28■■□□□ 1.32
MECP2-205ENST00000453960 PPM1GO15355 546 aaPredicted RBP23.28■■□□□ 1.32
MECP2-205ENST00000453960 ATF7IPQ6VMQ6 1270 aa23.28■■□□□ 1.32
MECP2-205ENST00000453960 CEP170BQ9Y4F5 1589 aaPredicted RBP23.28■■□□□ 1.32
MECP2-205ENST00000453960 KIF16BQ96L93 1317 aa23.28■■□□□ 1.32
MECP2-205ENST00000453960 IFT57Q9NWB7 429 aa23.28■■□□□ 1.32
MECP2-205ENST00000453960 AMOTL2Q9Y2J4 779 aa23.28■■□□□ 1.32
MECP2-205ENST00000453960 TTC21AQ8NDW8 1320 aa23.27■■□□□ 1.32
MECP2-205ENST00000453960 ANKARQ7Z5J8 1434 aa23.27■■□□□ 1.31
MECP2-205ENST00000453960 SLC26A8Q96RN1 970 aa23.26■■□□□ 1.31
MECP2-205ENST00000453960 ZNF142P52746 1687 aaPredicted RBP23.25■■□□□ 1.31
MECP2-205ENST00000453960 HMOX1P09601 288 aa23.25■■□□□ 1.31
MECP2-205ENST00000453960 LMOD3Q0VAK6 560 aa23.25■■□□□ 1.31
MECP2-205ENST00000453960 RRS1Q15050 365 aaKnown RBP23.25■■□□□ 1.31
MECP2-205ENST00000453960 ILDR1Q86SU0 546 aaPredicted RBP23.25■■□□□ 1.31
MECP2-205ENST00000453960 DDX19BQ9UMR2 479 aa23.25■■□□□ 1.31
MECP2-205ENST00000453960 RGS3P49796 1198 aa23.24■■□□□ 1.31
MECP2-205ENST00000453960 GNAI1P63096 354 aa23.24■■□□□ 1.31
MECP2-205ENST00000453960 DDRGK1Q96HY6 314 aa23.24■■□□□ 1.31
MECP2-205ENST00000453960 RWDD1Q9H446 243 aaPredicted RBP23.24■■□□□ 1.31
MECP2-205ENST00000453960 FTSJ3Q8IY81 847 aaKnown RBP23.23■■□□□ 1.31
MECP2-205ENST00000453960 MARF1Q9Y4F3 1742 aaKnown RBP23.23■■□□□ 1.31
MECP2-205ENST00000453960 PIK3C2AO00443 1686 aa23.23■■□□□ 1.31
MECP2-205ENST00000453960 IPO8O15397 1037 aaKnown RBP23.22■■□□□ 1.31
MECP2-205ENST00000453960 HDAC1Q13547 482 aaPredicted RBP23.22■■□□□ 1.31
MECP2-205ENST00000453960 CHD2O14647 1828 aaKnown RBP23.22■■□□□ 1.31
MECP2-205ENST00000453960 NPM2Q86SE8 214 aaKnown RBP23.22■■□□□ 1.31
MECP2-205ENST00000453960 NOB1Q9ULX3 412 aaKnown RBP23.22■■□□□ 1.31
MECP2-205ENST00000453960 VAMP4O75379 141 aa23.21■■□□□ 1.31
MECP2-205ENST00000453960 EIF4A2Q14240 407 aaKnown RBP23.21■■□□□ 1.31
MECP2-205ENST00000453960 ARHGAP45Q92619 1136 aa23.21■■□□□ 1.31
MECP2-205ENST00000453960 CFAP44Q96MT7 982 aa23.2■■□□□ 1.3
MECP2-205ENST00000453960 ZBTB40Q9NUA8 1239 aa23.19■■□□□ 1.3
MECP2-205ENST00000453960 PDZRN3Q9UPQ7 1066 aa23.17■■□□□ 1.3
MECP2-205ENST00000453960 ARHGEF10O15013 1369 aa23.17■■□□□ 1.3
MECP2-205ENST00000453960 TMEM57Q8N5G2 664 aa23.16■■□□□ 1.3
MECP2-205ENST00000453960 MRPL50Q8N5N7 158 aaKnown RBP23.16■■□□□ 1.3
MECP2-205ENST00000453960 MBIPQ9NS73 344 aa23.16■■□□□ 1.3
MECP2-205ENST00000453960 ADAMTSL3P82987 1691 aa23.16■■□□□ 1.3
MECP2-205ENST00000453960 SBNO1A3KN83 1393 aa23.15■■□□□ 1.3
MECP2-205ENST00000453960 KDRP35968 1356 aa23.15■■□□□ 1.3
MECP2-205ENST00000453960 KIF24Q5T7B8 1368 aa23.15■■□□□ 1.3
MECP2-205ENST00000453960 USP19O94966 1318 aa23.14■■□□□ 1.3
MECP2-205ENST00000453960 SMC5Q8IY18 1101 aa23.14■■□□□ 1.3
MECP2-205ENST00000453960 THUMPD2Q9BTF0 503 aaKnown RBP23.14■■□□□ 1.3
MECP2-205ENST00000453960 FLT4P35916 1363 aa23.12■■□□□ 1.29
MECP2-205ENST00000453960 SETD1BQ9UPS6 1966 aaKnown RBP23.12■■□□□ 1.29
MECP2-205ENST00000453960 AEBP1Q8IUX7 1158 aa23.11■■□□□ 1.29
MECP2-205ENST00000453960 ITPRIPQ8IWB1 547 aa23.11■■□□□ 1.29
MECP2-205ENST00000453960 TSPYL6Q8N831 410 aa23.11■■□□□ 1.29
MECP2-205ENST00000453960 ABCC4O15439 1325 aa23.11■■□□□ 1.29
MECP2-205ENST00000453960 SULT6B1Q6IMI4 303 aa23.11■■□□□ 1.29
MECP2-205ENST00000453960 HSP90AB2PQ58FF8 381 aa23.1■■□□□ 1.29
MECP2-205ENST00000453960 MAP3K19Q56UN5 1328 aa23.09■■□□□ 1.29
MECP2-205ENST00000453960 KIAA0232Q92628 1395 aa23.09■■□□□ 1.29
MECP2-205ENST00000453960 NUTM2FA1L443 756 aa23.08■■□□□ 1.29
MECP2-205ENST00000453960 KCNA6P17658 529 aa23.08■■□□□ 1.29
MECP2-205ENST00000453960 CHMP4BQ9H444 224 aaKnown RBP23.08■■□□□ 1.29
MECP2-205ENST00000453960 CHL1O00533 1208 aa23.08■■□□□ 1.28
MECP2-205ENST00000453960 TWISTNBQ3B726 338 aaPredicted RBP23.08■■□□□ 1.28
MECP2-205ENST00000453960 LAS1LQ9Y4W2 734 aaKnown RBP23.08■■□□□ 1.28
MECP2-205ENST00000453960 LRRC37A3O60309 1634 aa23.07■■□□□ 1.28
MECP2-205ENST00000453960 CRB1P82279 1406 aa23.07■■□□□ 1.28
MECP2-205ENST00000453960 FAM83GA6ND36 823 aa23.06■■□□□ 1.28
MECP2-205ENST00000453960 ZBTB7BO15156 539 aaPredicted RBP23.06■■□□□ 1.28
MECP2-205ENST00000453960 C8orf58Q8NAV2 365 aa23.06■■□□□ 1.28
MECP2-205ENST00000453960 IGSF1Q8N6C5 1336 aa23.06■■□□□ 1.28
MECP2-205ENST00000453960 NWD1Q149M9 1564 aa23.05■■□□□ 1.28
MECP2-205ENST00000453960 NGDNQ8NEJ9 315 aaKnown RBP23.05■■□□□ 1.28
MECP2-205ENST00000453960 HAP1P54257 671 aaPredicted RBP23.03■■□□□ 1.28
MECP2-205ENST00000453960 PHRF1Q9P1Y6 1649 aaKnown RBP23.02■■□□□ 1.28
MECP2-205ENST00000453960 SEC24BO95487 1268 aa23.02■■□□□ 1.28
MECP2-205ENST00000453960 API5Q9BZZ5 524 aaKnown RBP23.02■■□□□ 1.28
MECP2-205ENST00000453960 DCTN1Q14203 1278 aa23.01■■□□□ 1.27
MECP2-205ENST00000453960 RGS12O14924 1447 aa23■■□□□ 1.27
MECP2-205ENST00000453960 NUCB1Q02818 461 aa22.99■■□□□ 1.27
MECP2-205ENST00000453960 ANKLE2Q86XL3 938 aa22.99■■□□□ 1.27
MECP2-205ENST00000453960 USP35Q9P2H5 1018 aa22.99■■□□□ 1.27
MECP2-205ENST00000453960 RTL1A6NKG5 1358 aa22.99■■□□□ 1.27
MECP2-205ENST00000453960 ADGRL3Q9HAR2 1447 aa22.98■■□□□ 1.27
MECP2-205ENST00000453960 LTN1O94822 1766 aa22.97■■□□□ 1.27
MECP2-205ENST00000453960 HTATSF1O43719 755 aaKnown RBP22.97■■□□□ 1.27
MECP2-205ENST00000453960 EYA1Q99502 592 aa22.96■■□□□ 1.27
MECP2-205ENST00000453960 CACNA1FO60840 1977 aa22.96■■□□□ 1.27
MECP2-205ENST00000453960 INTS3Q68E01 1043 aaKnown RBP22.96■■□□□ 1.27
MECP2-205ENST00000453960 NFAT5O94916 1531 aa22.96■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms