RNA–Protein interactions for RNA: ENST00000453724.5

RPE-215, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 5

Gene RPE, Length 546 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-215ENST00000453724 KNSTRNQ9Y448 316 aa8.53□□□□□ -1.04
RPE-215ENST00000453724 CAMTA1Q9Y6Y1 1673 aa8.53□□□□□ -1.04
RPE-215ENST00000453724 PARP4Q9UKK3 1724 aaKnown RBP8.52□□□□□ -1.05
RPE-215ENST00000453724 PLEKHG5O94827 1062 aa8.52□□□□□ -1.05
RPE-215ENST00000453724 NME9Q86XW9 330 aa8.52□□□□□ -1.05
RPE-215ENST00000453724 SEPT12Q8IYM1 358 aa8.52□□□□□ -1.05
RPE-215ENST00000453724 PANK3Q9H999 370 aa8.52□□□□□ -1.05
RPE-215ENST00000453724 PRDM11Q9NQV5 511 aa8.52□□□□□ -1.05
RPE-215ENST00000453724 RGPD2P0DJD1 1756 aa8.52□□□□□ -1.05
RPE-215ENST00000453724 PEAK1Q9H792 1746 aa8.51□□□□□ -1.05
RPE-215ENST00000453724 COL5A2P05997 1499 aaPredicted RBP8.51□□□□□ -1.05
RPE-215ENST00000453724 FYB1O15117 783 aa8.51□□□□□ -1.05
RPE-215ENST00000453724 CABLES1Q8TDN4 633 aa8.51□□□□□ -1.05
RPE-215ENST00000453724 CARD14Q9BXL6 1004 aa8.51□□□□□ -1.05
RPE-215ENST00000453724 SMG6Q86US8 1419 aaKnown RBP8.51□□□□□ -1.05
RPE-215ENST00000453724 THSD7AQ9UPZ6 1657 aa8.5□□□□□ -1.05
RPE-215ENST00000453724 NUTM2GQ5VZR2 741 aa8.5□□□□□ -1.05
RPE-215ENST00000453724 ARHGEF25Q86VW2 580 aa8.5□□□□□ -1.05
RPE-215ENST00000453724 TNS1Q9HBL0 1735 aaKnown RBP8.49□□□□□ -1.05
RPE-215ENST00000453724 RGPD1P0DJD0 1748 aa8.49□□□□□ -1.05
RPE-215ENST00000453724 FLT4P35916 1363 aa8.48□□□□□ -1.05
RPE-215ENST00000453724 CRB1P82279 1406 aa8.48□□□□□ -1.05
RPE-215ENST00000453724 FAM83GA6ND36 823 aa8.48□□□□□ -1.05
RPE-215ENST00000453724 PER1O15534 1290 aaPredicted RBP8.48□□□□□ -1.05
RPE-215ENST00000453724 ZC3H6P61129 1189 aaKnown RBP8.48□□□□□ -1.05
RPE-215ENST00000453724 VPS72Q15906 364 aa8.48□□□□□ -1.05
RPE-215ENST00000453724 AMER1Q5JTC6 1135 aaPredicted RBP8.48□□□□□ -1.05
RPE-215ENST00000453724 FAM182BQ5T319 152 aa8.48□□□□□ -1.05
RPE-215ENST00000453724 KRT27Q7Z3Y8 459 aa8.48□□□□□ -1.05
RPE-215ENST00000453724 GGNBP2Q9H3C7 697 aa8.48□□□□□ -1.05
RPE-215ENST00000453724 BTG4Q9NY30 223 aa8.48□□□□□ -1.05
RPE-215ENST00000453724 VIRMAQ69YN4 1812 aaKnown RBP8.47□□□□□ -1.05
RPE-215ENST00000453724 SF3B2Q13435 895 aaKnown RBP8.47□□□□□ -1.05
RPE-215ENST00000453724 CCDC9Q9Y3X0 531 aaKnown RBP8.47□□□□□ -1.05
RPE-215ENST00000453724 LRRC37A3O60309 1634 aa8.47□□□□□ -1.05
RPE-215ENST00000453724 PLEKHG2Q9H7P9 1386 aa8.47□□□□□ -1.05
RPE-215ENST00000453724 PKD1L3Q7Z443 1732 aa8.46□□□□□ -1.05
RPE-215ENST00000453724 ONECUT3O60422 494 aaPredicted RBP8.46□□□□□ -1.06
RPE-215ENST00000453724 EN1Q05925 392 aaPredicted RBP8.46□□□□□ -1.06
RPE-215ENST00000453724 IP6K1Q92551 441 aa8.46□□□□□ -1.06
RPE-215ENST00000453724 THRAP3Q9Y2W1 955 aaKnown RBP8.46□□□□□ -1.06
RPE-215ENST00000453724 ERBB3P21860 1342 aa8.46□□□□□ -1.06
RPE-215ENST00000453724 MAP3K19Q56UN5 1328 aa8.46□□□□□ -1.06
RPE-215ENST00000453724 WDR17Q8IZU2 1322 aa8.46□□□□□ -1.06
RPE-215ENST00000453724 INSRP06213 1382 aa8.46□□□□□ -1.06
RPE-215ENST00000453724 SBF2Q86WG5 1849 aa8.45□□□□□ -1.06
RPE-215ENST00000453724 ZNF316A6NFI3 1004 aaPredicted RBP8.45□□□□□ -1.06
RPE-215ENST00000453724 R3HDM1Q15032 1099 aaKnown RBP8.45□□□□□ -1.06
RPE-215ENST00000453724 CHRNA2Q15822 529 aa8.45□□□□□ -1.06
RPE-215ENST00000453724 FAM98CQ17RN3 349 aaKnown RBP8.45□□□□□ -1.06
RPE-215ENST00000453724 MORC1Q86VD1 984 aa8.45□□□□□ -1.06
RPE-215ENST00000453724 SPATA31A5Q5VU36 1347 aa8.45□□□□□ -1.06
RPE-215ENST00000453724 SPATA31A7Q8IWB4 1347 aa8.45□□□□□ -1.06
RPE-215ENST00000453724 SHANK3Q9BYB0 1731 aa8.45□□□□□ -1.06
RPE-215ENST00000453724 A0A0G2JS52 829 aa8.44□□□□□ -1.06
RPE-215ENST00000453724 SOX12O15370 315 aa8.44□□□□□ -1.06
RPE-215ENST00000453724 HOXC9P31274 260 aa8.44□□□□□ -1.06
RPE-215ENST00000453724 BAG6P46379 1132 aa8.44□□□□□ -1.06
RPE-215ENST00000453724 AMPHP49418 695 aa8.44□□□□□ -1.06
RPE-215ENST00000453724 EVA1CP58658 441 aa8.44□□□□□ -1.06
RPE-215ENST00000453724 MYT1Q01538 1121 aa8.44□□□□□ -1.06
RPE-215ENST00000453724 NCAPD2Q15021 1401 aa8.44□□□□□ -1.06
RPE-215ENST00000453724 KAT6BQ8WYB5 2073 aa8.44□□□□□ -1.06
RPE-215ENST00000453724 BARGINQ6ZT62 677 aa8.43□□□□□ -1.06
RPE-215ENST00000453724 CDCA7Q9BWT1 371 aaPredicted RBP8.43□□□□□ -1.06
RPE-215ENST00000453724 SPATA31A1Q5TZJ5 1347 aa8.43□□□□□ -1.06
RPE-215ENST00000453724 PARD3Q8TEW0 1356 aa8.43□□□□□ -1.06
RPE-215ENST00000453724 ZBTB7CA1YPR0 619 aa8.42□□□□□ -1.06
RPE-215ENST00000453724 EZH2Q15910 746 aaKnown RBP8.42□□□□□ -1.06
RPE-215ENST00000453724 TCP11L2Q8N4U5 519 aa8.42□□□□□ -1.06
RPE-215ENST00000453724 CARD10Q9BWT7 1032 aa8.42□□□□□ -1.06
RPE-215ENST00000453724 STRN4Q9NRL3 753 aa8.42□□□□□ -1.06
RPE-215ENST00000453724 RREB1Q92766 1687 aa8.42□□□□□ -1.06
RPE-215ENST00000453724 NUP188Q5SRE5 1749 aa8.42□□□□□ -1.06
RPE-215ENST00000453724 RGPD3A6NKT7 1758 aaPredicted RBP8.42□□□□□ -1.06
RPE-215ENST00000453724 RGPD4Q7Z3J3 1758 aa8.42□□□□□ -1.06
RPE-215ENST00000453724 DISP2A7MBM2 1401 aa8.41□□□□□ -1.06
RPE-215ENST00000453724 TNS2Q63HR2 1409 aa8.41□□□□□ -1.06
RPE-215ENST00000453724 CSB-PGBD3P0DP91 1061 aa8.41□□□□□ -1.06
RPE-215ENST00000453724 RRS1Q15050 365 aaKnown RBP8.41□□□□□ -1.06
RPE-215ENST00000453724 RALBP1Q15311 655 aa8.41□□□□□ -1.06
RPE-215ENST00000453724 CC2D1BQ5T0F9 858 aaKnown RBP8.41□□□□□ -1.06
RPE-215ENST00000453724 TOM1L2Q6ZVM7 507 aa8.41□□□□□ -1.06
RPE-215ENST00000453724 ANKRD24Q8TF21 1146 aa8.41□□□□□ -1.06
RPE-215ENST00000453724 POLKQ9UBT6 870 aa8.41□□□□□ -1.06
RPE-215ENST00000453724 AXIN2Q9Y2T1 843 aa8.41□□□□□ -1.06
RPE-215ENST00000453724 COL3A1P02461 1466 aaPredicted RBP8.4□□□□□ -1.06
RPE-215ENST00000453724 DDX10Q13206 875 aaKnown RBP8.4□□□□□ -1.06
RPE-215ENST00000453724 LARP1Q6PKG0 1096 aaKnown RBP8.4□□□□□ -1.06
RPE-215ENST00000453724 EMILIN1Q9Y6C2 1016 aa8.4□□□□□ -1.06
RPE-215ENST00000453724 UTRNP46939 3433 aa8.39□□□□□ -1.07
RPE-215ENST00000453724 ITGB4P16144 1822 aa8.39□□□□□ -1.07
RPE-215ENST00000453724 TNNT2P45379 298 aaPredicted RBP8.39□□□□□ -1.07
RPE-215ENST00000453724 CFAP53Q96M91 514 aa8.39□□□□□ -1.07
RPE-215ENST00000453724 CAMKK2Q96RR4 588 aa8.39□□□□□ -1.07
RPE-215ENST00000453724 NHSQ6T4R5 1651 aa8.39□□□□□ -1.07
RPE-215ENST00000453724 OVOS2A0A0G2JMS6 1433 aa8.38□□□□□ -1.07
RPE-215ENST00000453724 SCN11AQ9UI33 1791 aa8.38□□□□□ -1.07
RPE-215ENST00000453724 DOT1LQ8TEK3 1739 aa8.38□□□□□ -1.07
RPE-215ENST00000453724 PPM1GO15355 546 aaPredicted RBP8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms