RNA–Protein interactions for RNA: ENST00000451542.5

SMPD4-212, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 796 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-212ENST00000451542 ONECUT3O60422 494 aaPredicted RBP16.54■□□□□ 0.24
SMPD4-212ENST00000451542 FAM98CQ17RN3 349 aaKnown RBP16.54■□□□□ 0.24
SMPD4-212ENST00000451542 TOM1L2Q6ZVM7 507 aa16.54■□□□□ 0.24
SMPD4-212ENST00000451542 SEPT12Q8IYM1 358 aa16.54■□□□□ 0.24
SMPD4-212ENST00000451542 CARD14Q9BXL6 1004 aa16.54■□□□□ 0.24
SMPD4-212ENST00000451542 PANK3Q9H999 370 aa16.54■□□□□ 0.24
SMPD4-212ENST00000451542 THRAP3Q9Y2W1 955 aaKnown RBP16.54■□□□□ 0.24
SMPD4-212ENST00000451542 KIF20BQ96Q89 1820 aa16.54■□□□□ 0.24
SMPD4-212ENST00000451542 TCP11L2Q8N4U5 519 aa16.53■□□□□ 0.24
SMPD4-212ENST00000451542 USP35Q9P2H5 1018 aa16.53■□□□□ 0.24
SMPD4-212ENST00000451542 KNSTRNQ9Y448 316 aa16.53■□□□□ 0.24
SMPD4-212ENST00000451542 COL5A2P05997 1499 aaPredicted RBP16.53■□□□□ 0.24
SMPD4-212ENST00000451542 KIF7Q2M1P5 1343 aa16.52■□□□□ 0.24
SMPD4-212ENST00000451542 WDR17Q8IZU2 1322 aa16.52■□□□□ 0.24
SMPD4-212ENST00000451542 C11orf95C9JLR9 678 aaPredicted RBP16.52■□□□□ 0.24
SMPD4-212ENST00000451542 AMPHP49418 695 aa16.52■□□□□ 0.24
SMPD4-212ENST00000451542 LARP1Q6PKG0 1096 aaKnown RBP16.52■□□□□ 0.24
SMPD4-212ENST00000451542 CRB1P82279 1406 aa16.52■□□□□ 0.23
SMPD4-212ENST00000451542 BARGINQ6ZT62 677 aa16.51■□□□□ 0.23
SMPD4-212ENST00000451542 LTN1O94822 1766 aa16.51■□□□□ 0.23
SMPD4-212ENST00000451542 IP6K1Q92551 441 aa16.5■□□□□ 0.23
SMPD4-212ENST00000451542 CDCA7Q9BWT1 371 aaPredicted RBP16.5■□□□□ 0.23
SMPD4-212ENST00000451542 AXIN2Q9Y2T1 843 aa16.5■□□□□ 0.23
SMPD4-212ENST00000451542 COL18A1P39060 1754 aa16.5■□□□□ 0.23
SMPD4-212ENST00000451542 BLMP54132 1417 aaPredicted RBP16.5■□□□□ 0.23
SMPD4-212ENST00000451542 NSD2O96028 1365 aa16.5■□□□□ 0.23
SMPD4-212ENST00000451542 KRT27Q7Z3Y8 459 aa16.49■□□□□ 0.23
SMPD4-212ENST00000451542 CARD10Q9BWT7 1032 aa16.48■□□□□ 0.23
SMPD4-212ENST00000451542 KIF24Q5T7B8 1368 aa16.48■□□□□ 0.23
SMPD4-212ENST00000451542 CCDC7Q96M83 1385 aa16.48■□□□□ 0.23
SMPD4-212ENST00000451542 MAP3K19Q56UN5 1328 aa16.47■□□□□ 0.23
SMPD4-212ENST00000451542 RGPD5Q99666 1765 aa16.47■□□□□ 0.23
SMPD4-212ENST00000451542 PDE3BQ13370 1112 aa16.47■□□□□ 0.23
SMPD4-212ENST00000451542 RTL1A6NKG5 1358 aa16.47■□□□□ 0.23
SMPD4-212ENST00000451542 ERBB3P21860 1342 aa16.46■□□□□ 0.23
SMPD4-212ENST00000451542 CCDC125Q86Z20 511 aa16.46■□□□□ 0.23
SMPD4-212ENST00000451542 ANKRD24Q8TF21 1146 aa16.46■□□□□ 0.23
SMPD4-212ENST00000451542 NLRP2Q9NX02 1062 aa16.46■□□□□ 0.23
SMPD4-212ENST00000451542 HOXC9P31274 260 aa16.45■□□□□ 0.22
SMPD4-212ENST00000451542 RRS1Q15050 365 aaKnown RBP16.45■□□□□ 0.22
SMPD4-212ENST00000451542 UPF1Q92900 1129 aaKnown RBP eCLIP16.45■□□□□ 0.22
SMPD4-212ENST00000451542 SMG6Q86US8 1419 aaKnown RBP16.45■□□□□ 0.22
SMPD4-212ENST00000451542 WASHC2AQ641Q2 1341 aa16.45■□□□□ 0.22
SMPD4-212ENST00000451542 SF3B2Q13435 895 aaKnown RBP16.44■□□□□ 0.22
SMPD4-212ENST00000451542 MORC1Q86VD1 984 aa16.44■□□□□ 0.22
SMPD4-212ENST00000451542 BRWD3Q6RI45 1802 aa16.44■□□□□ 0.22
SMPD4-212ENST00000451542 FLT4P35916 1363 aa16.43■□□□□ 0.22
SMPD4-212ENST00000451542 LTV1Q96GA3 475 aaPredicted RBP16.43■□□□□ 0.22
SMPD4-212ENST00000451542 ANKRD26Q9UPS8 1709 aa16.42■□□□□ 0.22
SMPD4-212ENST00000451542 PPM1GO15355 546 aaPredicted RBP16.42■□□□□ 0.22
SMPD4-212ENST00000451542 DDB1Q16531 1140 aa16.42■□□□□ 0.22
SMPD4-212ENST00000451542 THSD7AQ9UPZ6 1657 aa16.42■□□□□ 0.22
SMPD4-212ENST00000451542 FAM208AQ9UK61 1670 aaKnown RBP16.41■□□□□ 0.22
SMPD4-212ENST00000451542 FBLN1P23142 703 aa16.41■□□□□ 0.22
SMPD4-212ENST00000451542 INSRP06213 1382 aa16.4■□□□□ 0.22
SMPD4-212ENST00000451542 TNNT2P45379 298 aaPredicted RBP16.4■□□□□ 0.22
SMPD4-212ENST00000451542 FAM196AQ6ZSG2 479 aa16.4■□□□□ 0.22
SMPD4-212ENST00000451542 MAP2P11137 1827 aaKnown RBP16.4■□□□□ 0.22
SMPD4-212ENST00000451542 EXOC5O00471 708 aa16.39■□□□□ 0.21
SMPD4-212ENST00000451542 IL2RBP14784 551 aa16.39■□□□□ 0.21
SMPD4-212ENST00000451542 EMILIN1Q9Y6C2 1016 aa16.38■□□□□ 0.21
SMPD4-212ENST00000451542 PARP4Q9UKK3 1724 aaKnown RBP16.38■□□□□ 0.21
SMPD4-212ENST00000451542 HSP90AB2PQ58FF8 381 aa16.37■□□□□ 0.21
SMPD4-212ENST00000451542 AMER1Q5JTC6 1135 aaPredicted RBP16.37■□□□□ 0.21
SMPD4-212ENST00000451542 POLKQ9UBT6 870 aa16.37■□□□□ 0.21
SMPD4-212ENST00000451542 PER1O15534 1290 aaPredicted RBP16.36■□□□□ 0.21
SMPD4-212ENST00000451542 NPC1L1Q9UHC9 1359 aa16.36■□□□□ 0.21
SMPD4-212ENST00000451542 CC2D1BQ5T0F9 858 aaKnown RBP16.35■□□□□ 0.21
SMPD4-212ENST00000451542 WNK3Q9BYP7 1800 aa16.35■□□□□ 0.21
SMPD4-212ENST00000451542 RAPGEF4Q8WZA2 1011 aa16.34■□□□□ 0.21
SMPD4-212ENST00000451542 BAG6P46379 1132 aa16.33■□□□□ 0.2
SMPD4-212ENST00000451542 OVOS2A0A0G2JMS6 1433 aa16.33■□□□□ 0.2
SMPD4-212ENST00000451542 DISP2A7MBM2 1401 aa16.33■□□□□ 0.2
SMPD4-212ENST00000451542 FAM182BQ5T319 152 aa16.32■□□□□ 0.2
SMPD4-212ENST00000451542 PEAK1Q9H792 1746 aa16.31■□□□□ 0.2
SMPD4-212ENST00000451542 LRRC37A3O60309 1634 aa16.31■□□□□ 0.2
SMPD4-212ENST00000451542 TNS2Q63HR2 1409 aa16.31■□□□□ 0.2
SMPD4-212ENST00000451542 TATP17735 454 aaPredicted RBP16.31■□□□□ 0.2
SMPD4-212ENST00000451542 NBPF6Q5VWK0 638 aa16.31■□□□□ 0.2
SMPD4-212ENST00000451542 NBPF4Q96M43 638 aa16.31■□□□□ 0.2
SMPD4-212ENST00000451542 RGPD1P0DJD0 1748 aa16.3■□□□□ 0.2
SMPD4-212ENST00000451542 TRIM37O94972 964 aa16.29■□□□□ 0.2
SMPD4-212ENST00000451542 CNGB1Q14028 1251 aaPredicted RBP16.29■□□□□ 0.2
SMPD4-212ENST00000451542 ZCRB1Q8TBF4 217 aaKnown RBP16.29■□□□□ 0.2
SMPD4-212ENST00000451542 MARCH10Q8NA82 808 aaPredicted RBP16.28■□□□□ 0.2
SMPD4-212ENST00000451542 RGPD2P0DJD1 1756 aa16.28■□□□□ 0.2
SMPD4-212ENST00000451542 KAT6BQ8WYB5 2073 aa16.27■□□□□ 0.2
SMPD4-212ENST00000451542 MTHFSP49914 203 aa16.27■□□□□ 0.2
SMPD4-212ENST00000451542 EIF4A2Q14240 407 aaKnown RBP16.27■□□□□ 0.2
SMPD4-212ENST00000451542 USHBP1Q8N6Y0 703 aa16.27■□□□□ 0.2
SMPD4-212ENST00000451542 BCL9O00512 1426 aa16.27■□□□□ 0.19
SMPD4-212ENST00000451542 DDX54Q8TDD1 881 aaKnown RBP16.26■□□□□ 0.19
SMPD4-212ENST00000451542 EYA1Q99502 592 aa16.26■□□□□ 0.19
SMPD4-212ENST00000451542 APBA3O96018 575 aa16.25■□□□□ 0.19
SMPD4-212ENST00000451542 CFAP53Q96M91 514 aa16.25■□□□□ 0.19
SMPD4-212ENST00000451542 DEFB132Q7Z7B7 95 aa16.24■□□□□ 0.19
SMPD4-212ENST00000451542 BCL11BQ9C0K0 894 aaPredicted RBP16.24■□□□□ 0.19
SMPD4-212ENST00000451542 SPG7Q9UQ90 795 aa16.24■□□□□ 0.19
SMPD4-212ENST00000451542 PCDH11XQ9BZA7 1347 aa16.23■□□□□ 0.19
SMPD4-212ENST00000451542 PCDH11YQ9BZA8 1340 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms