RNA–Protein interactions for RNA: ENST00000450056.6

CHFR-205, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2 BASIC

Gene CHFR, Length 3,250 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-205ENST00000450056 CLTCL1P53675 1640 aa17.22■□□□□ 0.35
CHFR-205ENST00000450056 SPDYE4A6NLX3 237 aa17.22■□□□□ 0.35
CHFR-205ENST00000450056 TMEM63CQ9P1W3 806 aa17.22■□□□□ 0.35
CHFR-205ENST00000450056 ATAD2Q6PL18 1390 aa17.22■□□□□ 0.35
CHFR-205ENST00000450056 SMARCA5O60264 1052 aaPredicted RBP17.22■□□□□ 0.35
CHFR-205ENST00000450056 RABEP1Q15276 862 aa17.22■□□□□ 0.35
CHFR-205ENST00000450056 SASS6Q6UVJ0 657 aa17.22■□□□□ 0.35
CHFR-205ENST00000450056 GPT2Q8TD30 523 aa17.22■□□□□ 0.35
CHFR-205ENST00000450056 NPC1L1Q9UHC9 1359 aa17.21■□□□□ 0.34
CHFR-205ENST00000450056 SLC24A1O60721 1099 aa17.2■□□□□ 0.34
CHFR-205ENST00000450056 EFCAB6Q5THR3 1501 aa17.2■□□□□ 0.34
CHFR-205ENST00000450056 VIRMAQ69YN4 1812 aaKnown RBP17.2■□□□□ 0.34
CHFR-205ENST00000450056 CASC1Q6TDU7 716 aa17.2■□□□□ 0.34
CHFR-205ENST00000450056 PPRC1Q5VV67 1664 aaKnown RBP17.2■□□□□ 0.34
CHFR-205ENST00000450056 LAMC1P11047 1609 aa17.2■□□□□ 0.34
CHFR-205ENST00000450056 DYNC1I1O14576 645 aa17.2■□□□□ 0.34
CHFR-205ENST00000450056 NEK4P51957 841 aa17.2■□□□□ 0.34
CHFR-205ENST00000450056 ZNF445P59923 1031 aa17.2■□□□□ 0.34
CHFR-205ENST00000450056 OTUD7AQ8TE49 926 aaPredicted RBP17.19■□□□□ 0.34
CHFR-205ENST00000450056 TRIM35Q9UPQ4 493 aa17.19■□□□□ 0.34
CHFR-205ENST00000450056 DIP2CQ9Y2E4 1556 aa17.19■□□□□ 0.34
CHFR-205ENST00000450056 GCC1Q96CN9 775 aa17.18■□□□□ 0.34
CHFR-205ENST00000450056 TTC12Q9H892 705 aaPredicted RBP17.18■□□□□ 0.34
CHFR-205ENST00000450056 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.18■□□□□ 0.34
CHFR-205ENST00000450056 NEURL4Q96JN8 1562 aa17.18■□□□□ 0.34
CHFR-205ENST00000450056 CCDC27Q2M243 656 aa17.18■□□□□ 0.34
CHFR-205ENST00000450056 KANK1Q14678 1352 aa17.18■□□□□ 0.34
CHFR-205ENST00000450056 DTNBO60941 627 aa17.17■□□□□ 0.34
CHFR-205ENST00000450056 TSPYL6Q8N831 410 aa17.17■□□□□ 0.34
CHFR-205ENST00000450056 USP25Q9UHP3 1055 aa17.17■□□□□ 0.34
CHFR-205ENST00000450056 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.17■□□□□ 0.34
CHFR-205ENST00000450056 ZMYM3Q14202 1370 aa17.17■□□□□ 0.34
CHFR-205ENST00000450056 ZNF500O60304 480 aaPredicted RBP17.16■□□□□ 0.34
CHFR-205ENST00000450056 LRSAM1Q6UWE0 723 aa17.16■□□□□ 0.34
CHFR-205ENST00000450056 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.16■□□□□ 0.34
CHFR-205ENST00000450056 GSPT1P15170 499 aaKnown RBP17.16■□□□□ 0.34
CHFR-205ENST00000450056 TSPY26PQ9H489 355 aa17.16■□□□□ 0.34
CHFR-205ENST00000450056 PRKAR2BP31323 418 aa17.15■□□□□ 0.34
CHFR-205ENST00000450056 PHF23Q9BUL5 403 aaPredicted RBP17.15■□□□□ 0.34
CHFR-205ENST00000450056 NCOA3Q9Y6Q9 1424 aa17.15■□□□□ 0.34
CHFR-205ENST00000450056 PPP4R3BQ5MIZ7 849 aa17.15■□□□□ 0.34
CHFR-205ENST00000450056 INTS3Q68E01 1043 aaKnown RBP17.15■□□□□ 0.34
CHFR-205ENST00000450056 SYNMO15061 1565 aa17.15■□□□□ 0.34
CHFR-205ENST00000450056 MADDQ8WXG6 1647 aa17.15■□□□□ 0.34
CHFR-205ENST00000450056 DIAPH1O60610 1272 aaKnown RBP17.15■□□□□ 0.34
CHFR-205ENST00000450056 TSHZ3Q63HK5 1081 aa17.15■□□□□ 0.34
CHFR-205ENST00000450056 ZBTB7BO15156 539 aaPredicted RBP17.14■□□□□ 0.33
CHFR-205ENST00000450056 MTERF4Q7Z6M4 381 aaKnown RBP17.14■□□□□ 0.33
CHFR-205ENST00000450056 CT47B1P0C2W7 299 aaPredicted RBP17.14■□□□□ 0.33
CHFR-205ENST00000450056 GGT6Q6P531 493 aa17.13■□□□□ 0.33
CHFR-205ENST00000450056 ERVK-7P63135 1459 aa17.13■□□□□ 0.33
CHFR-205ENST00000450056 RAPGEF3O95398 923 aa17.13■□□□□ 0.33
CHFR-205ENST00000450056 SMAP1Q8IYB5 467 aaPredicted RBP17.13■□□□□ 0.33
CHFR-205ENST00000450056 SPC24Q8NBT2 197 aa17.13■□□□□ 0.33
CHFR-205ENST00000450056 HS1BP3Q53T59 392 aa17.12■□□□□ 0.33
CHFR-205ENST00000450056 CHMP3Q9Y3E7 222 aa17.12■□□□□ 0.33
CHFR-205ENST00000450056 SIRT2Q8IXJ6 389 aa17.12■□□□□ 0.33
CHFR-205ENST00000450056 PLEKHM2Q8IWE5 1019 aa17.11■□□□□ 0.33
CHFR-205ENST00000450056 CCDC94Q9BW85 323 aaPredicted RBP17.11■□□□□ 0.33
CHFR-205ENST00000450056 UPF3BQ9BZI7 483 aaKnown RBP17.11■□□□□ 0.33
CHFR-205ENST00000450056 TERF1P54274 439 aa17.11■□□□□ 0.33
CHFR-205ENST00000450056 SLC4A10Q6U841 1118 aa17.11■□□□□ 0.33
CHFR-205ENST00000450056 LARP6Q9BRS8 491 aaKnown RBP17.11■□□□□ 0.33
CHFR-205ENST00000450056 USP26Q9BXU7 913 aa17.11■□□□□ 0.33
CHFR-205ENST00000450056 CHMP4BQ9H444 224 aaKnown RBP17.11■□□□□ 0.33
CHFR-205ENST00000450056 MINK1Q8N4C8 1332 aaPredicted RBP17.11■□□□□ 0.33
CHFR-205ENST00000450056 UGGT1Q9NYU2 1555 aa17.11■□□□□ 0.33
CHFR-205ENST00000450056 TRIM6-TRIM34B2RNG4 842 aa17.11■□□□□ 0.33
CHFR-205ENST00000450056 RILPL2Q969X0 211 aa17.11■□□□□ 0.33
CHFR-205ENST00000450056 SDSP20132 328 aa17.1■□□□□ 0.33
CHFR-205ENST00000450056 MAPK8IP2Q13387 824 aaPredicted RBP17.1■□□□□ 0.33
CHFR-205ENST00000450056 DCTN1Q14203 1278 aa17.1■□□□□ 0.33
CHFR-205ENST00000450056 SYAP1Q96A49 352 aaPredicted RBP17.1■□□□□ 0.33
CHFR-205ENST00000450056 PDLIM2Q96JY6 352 aa17.1■□□□□ 0.33
CHFR-205ENST00000450056 CWC22Q9HCG8 908 aaKnown RBP17.1■□□□□ 0.33
CHFR-205ENST00000450056 ABCC3O15438 1527 aa17.1■□□□□ 0.33
CHFR-205ENST00000450056 PPIP5K1Q6PFW1 1433 aa17.1■□□□□ 0.33
CHFR-205ENST00000450056 IFT172Q9UG01 1749 aa17.1■□□□□ 0.33
CHFR-205ENST00000450056 ANO2Q9NQ90 1003 aa17.09■□□□□ 0.33
CHFR-205ENST00000450056 MROH2AA6NES4 1674 aa17.09■□□□□ 0.33
CHFR-205ENST00000450056 ZDHHC9Q9Y397 364 aa17.09■□□□□ 0.33
CHFR-205ENST00000450056 GADD45BO75293 160 aaPredicted RBP17.08■□□□□ 0.33
CHFR-205ENST00000450056 NOLC1Q14978 699 aaKnown RBP eCLIP17.08■□□□□ 0.33
CHFR-205ENST00000450056 TWISTNBQ3B726 338 aaPredicted RBP17.08■□□□□ 0.33
CHFR-205ENST00000450056 EVC2Q86UK5 1308 aa17.08■□□□□ 0.33
CHFR-205ENST00000450056 REC8O95072 547 aa17.08■□□□□ 0.32
CHFR-205ENST00000450056 MBD3O95983 291 aa17.08■□□□□ 0.32
CHFR-205ENST00000450056 HCLS1P14317 486 aaPredicted RBP17.08■□□□□ 0.32
CHFR-205ENST00000450056 CHAF1AQ13111 956 aaPredicted RBP17.08■□□□□ 0.32
CHFR-205ENST00000450056 KIF3AQ9Y496 699 aa17.08■□□□□ 0.32
CHFR-205ENST00000450056 YEATS2Q9ULM3 1422 aa17.08■□□□□ 0.32
CHFR-205ENST00000450056 CAMSAP1Q5T5Y3 1602 aa17.08■□□□□ 0.32
CHFR-205ENST00000450056 KIF13AQ9H1H9 1805 aa17.08■□□□□ 0.32
CHFR-205ENST00000450056 TTC22Q5TAA0 569 aa17.08■□□□□ 0.32
CHFR-205ENST00000450056 KIF1BO60333 1816 aa17.07■□□□□ 0.32
CHFR-205ENST00000450056 ZNF771Q7L3S4 317 aaPredicted RBP17.07■□□□□ 0.32
CHFR-205ENST00000450056 TMX3Q96JJ7 454 aa17.07■□□□□ 0.32
CHFR-205ENST00000450056 NPATQ14207 1427 aa17.06■□□□□ 0.32
CHFR-205ENST00000450056 SIGLEC1Q9BZZ2 1709 aa17.06■□□□□ 0.32
CHFR-205ENST00000450056 ADCY5O95622 1261 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms