RNA–Protein interactions for RNA: ENST00000449704.5

TOP3B-211, Transcript of DNA topoisomerase III beta, humanhuman

TSL 3

Gene TOP3B, Length 543 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-211ENST00000449704 A0A0G2JS52 829 aa21.6■■□□□ 1.05
TOP3B-211ENST00000449704 MYT1Q01538 1121 aa21.6■■□□□ 1.05
TOP3B-211ENST00000449704 FAM98CQ17RN3 349 aaKnown RBP21.6■■□□□ 1.05
TOP3B-211ENST00000449704 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.6■■□□□ 1.05
TOP3B-211ENST00000449704 CSB-PGBD3P0DP91 1061 aa21.59■■□□□ 1.05
TOP3B-211ENST00000449704 SPATA31A1Q5TZJ5 1347 aa21.58■■□□□ 1.05
TOP3B-211ENST00000449704 SEPT12Q8IYM1 358 aa21.58■■□□□ 1.05
TOP3B-211ENST00000449704 KNSTRNQ9Y448 316 aa21.58■■□□□ 1.05
TOP3B-211ENST00000449704 TOM1L2Q6ZVM7 507 aa21.57■■□□□ 1.04
TOP3B-211ENST00000449704 COL5A2P05997 1499 aaPredicted RBP21.57■■□□□ 1.04
TOP3B-211ENST00000449704 GLI3P10071 1580 aa21.57■■□□□ 1.04
TOP3B-211ENST00000449704 MAP3K19Q56UN5 1328 aa21.56■■□□□ 1.04
TOP3B-211ENST00000449704 NRAPQ86VF7 1730 aa21.56■■□□□ 1.04
TOP3B-211ENST00000449704 AMPHP49418 695 aa21.56■■□□□ 1.04
TOP3B-211ENST00000449704 RRS1Q15050 365 aaKnown RBP21.56■■□□□ 1.04
TOP3B-211ENST00000449704 ONECUT3O60422 494 aaPredicted RBP21.55■■□□□ 1.04
TOP3B-211ENST00000449704 USP54Q70EL1 1684 aa21.55■■□□□ 1.04
TOP3B-211ENST00000449704 LMO7Q8WWI1 1683 aa21.55■■□□□ 1.04
TOP3B-211ENST00000449704 TCP11L2Q8N4U5 519 aa21.54■■□□□ 1.04
TOP3B-211ENST00000449704 IP6K1Q92551 441 aa21.54■■□□□ 1.04
TOP3B-211ENST00000449704 WDR17Q8IZU2 1322 aa21.54■■□□□ 1.04
TOP3B-211ENST00000449704 TNNT2P45379 298 aaPredicted RBP21.53■■□□□ 1.04
TOP3B-211ENST00000449704 ANKRD24Q8TF21 1146 aa21.52■■□□□ 1.04
TOP3B-211ENST00000449704 UPF1Q92900 1129 aaKnown RBP eCLIP21.52■■□□□ 1.04
TOP3B-211ENST00000449704 LTV1Q96GA3 475 aaPredicted RBP21.52■■□□□ 1.04
TOP3B-211ENST00000449704 HOXC9P31274 260 aa21.51■■□□□ 1.03
TOP3B-211ENST00000449704 CRB1P82279 1406 aa21.51■■□□□ 1.03
TOP3B-211ENST00000449704 BARGINQ6ZT62 677 aa21.5■■□□□ 1.03
TOP3B-211ENST00000449704 MORC1Q86VD1 984 aa21.5■■□□□ 1.03
TOP3B-211ENST00000449704 NLRP2Q9NX02 1062 aa21.5■■□□□ 1.03
TOP3B-211ENST00000449704 THRAP3Q9Y2W1 955 aaKnown RBP21.5■■□□□ 1.03
TOP3B-211ENST00000449704 COL18A1P39060 1754 aa21.5■■□□□ 1.03
TOP3B-211ENST00000449704 PPM1GO15355 546 aaPredicted RBP21.49■■□□□ 1.03
TOP3B-211ENST00000449704 ERBB3P21860 1342 aa21.49■■□□□ 1.03
TOP3B-211ENST00000449704 PER1O15534 1290 aaPredicted RBP21.48■■□□□ 1.03
TOP3B-211ENST00000449704 AMER1Q5JTC6 1135 aaPredicted RBP21.48■■□□□ 1.03
TOP3B-211ENST00000449704 KRT27Q7Z3Y8 459 aa21.48■■□□□ 1.03
TOP3B-211ENST00000449704 CARD10Q9BWT7 1032 aa21.48■■□□□ 1.03
TOP3B-211ENST00000449704 EMILIN1Q9Y6C2 1016 aa21.48■■□□□ 1.03
TOP3B-211ENST00000449704 NSD2O96028 1365 aa21.48■■□□□ 1.03
TOP3B-211ENST00000449704 ABCC6O95255 1503 aa21.47■■□□□ 1.03
TOP3B-211ENST00000449704 CNGB1Q14028 1251 aaPredicted RBP21.47■■□□□ 1.03
TOP3B-211ENST00000449704 KIF20BQ96Q89 1820 aa21.47■■□□□ 1.03
TOP3B-211ENST00000449704 BLMP54132 1417 aaPredicted RBP21.46■■□□□ 1.03
TOP3B-211ENST00000449704 HSP90AB2PQ58FF8 381 aa21.45■■□□□ 1.02
TOP3B-211ENST00000449704 RTL1A6NKG5 1358 aa21.45■■□□□ 1.02
TOP3B-211ENST00000449704 CC2D1BQ5T0F9 858 aaKnown RBP21.44■■□□□ 1.02
TOP3B-211ENST00000449704 POLKQ9UBT6 870 aa21.44■■□□□ 1.02
TOP3B-211ENST00000449704 FLT4P35916 1363 aa21.43■■□□□ 1.02
TOP3B-211ENST00000449704 LTN1O94822 1766 aa21.42■■□□□ 1.02
TOP3B-211ENST00000449704 PDE3BQ13370 1112 aa21.42■■□□□ 1.02
TOP3B-211ENST00000449704 FAM182BQ5T319 152 aa21.42■■□□□ 1.02
TOP3B-211ENST00000449704 INSRP06213 1382 aa21.4■■□□□ 1.02
TOP3B-211ENST00000449704 KIF24Q5T7B8 1368 aa21.4■■□□□ 1.02
TOP3B-211ENST00000449704 CDCA7Q9BWT1 371 aaPredicted RBP21.4■■□□□ 1.02
TOP3B-211ENST00000449704 RGPD5Q99666 1765 aa21.39■■□□□ 1.01
TOP3B-211ENST00000449704 DDB1Q16531 1140 aa21.38■■□□□ 1.01
TOP3B-211ENST00000449704 SMG6Q86US8 1419 aaKnown RBP21.38■■□□□ 1.01
TOP3B-211ENST00000449704 NBPF6Q5VWK0 638 aa21.37■■□□□ 1.01
TOP3B-211ENST00000449704 NBPF4Q96M43 638 aa21.37■■□□□ 1.01
TOP3B-211ENST00000449704 THSD7AQ9UPZ6 1657 aa21.37■■□□□ 1.01
TOP3B-211ENST00000449704 IL2RBP14784 551 aa21.36■■□□□ 1.01
TOP3B-211ENST00000449704 USHBP1Q8N6Y0 703 aa21.36■■□□□ 1.01
TOP3B-211ENST00000449704 EXOC5O00471 708 aa21.35■■□□□ 1.01
TOP3B-211ENST00000449704 NPC1L1Q9UHC9 1359 aa21.34■■□□□ 1.01
TOP3B-211ENST00000449704 PEAK1Q9H792 1746 aa21.33■■□□□ 1.01
TOP3B-211ENST00000449704 DISP2A7MBM2 1401 aa21.33■■□□□ 1.01
TOP3B-211ENST00000449704 DDX10Q13206 875 aaKnown RBP21.33■■□□□ 1.01
TOP3B-211ENST00000449704 FAM196AQ6ZSG2 479 aa21.33■■□□□ 1.01
TOP3B-211ENST00000449704 BRWD3Q6RI45 1802 aa21.33■■□□□ 1.01
TOP3B-211ENST00000449704 EIF4A2Q14240 407 aaKnown RBP21.31■■□□□ 1
TOP3B-211ENST00000449704 CCDC125Q86Z20 511 aa21.31■■□□□ 1
TOP3B-211ENST00000449704 ANKRD26Q9UPS8 1709 aa21.31■■□□□ 1
TOP3B-211ENST00000449704 MTHFSP49914 203 aa21.3■■□□□ 1
TOP3B-211ENST00000449704 SF3B2Q13435 895 aaKnown RBP21.3■■□□□ 1
TOP3B-211ENST00000449704 MARCH10Q8NA82 808 aaPredicted RBP21.3■■□□□ 1
TOP3B-211ENST00000449704 RAPGEF4Q8WZA2 1011 aa21.29■■□□□ 1
TOP3B-211ENST00000449704 EYA1Q99502 592 aa21.29■■□□□ 1
TOP3B-211ENST00000449704 MAP2P11137 1827 aaKnown RBP21.27■□□□□ 0.99
TOP3B-211ENST00000449704 TRIM37O94972 964 aa21.26■□□□□ 0.99
TOP3B-211ENST00000449704 TATP17735 454 aaPredicted RBP21.26■□□□□ 0.99
TOP3B-211ENST00000449704 EP400Q96L91 3159 aa21.25■□□□□ 0.99
TOP3B-211ENST00000449704 DDX54Q8TDD1 881 aaKnown RBP21.25■□□□□ 0.99
TOP3B-211ENST00000449704 PARP4Q9UKK3 1724 aaKnown RBP21.24■□□□□ 0.99
TOP3B-211ENST00000449704 OVOS2A0A0G2JMS6 1433 aa21.24■□□□□ 0.99
TOP3B-211ENST00000449704 TNS2Q63HR2 1409 aa21.24■□□□□ 0.99
TOP3B-211ENST00000449704 ZCRB1Q8TBF4 217 aaKnown RBP21.24■□□□□ 0.99
TOP3B-211ENST00000449704 LRRC37A3O60309 1634 aa21.23■□□□□ 0.99
TOP3B-211ENST00000449704 FAM208AQ9UK61 1670 aaKnown RBP21.23■□□□□ 0.99
TOP3B-211ENST00000449704 MEGF6O75095 1541 aa21.23■□□□□ 0.99
TOP3B-211ENST00000449704 DEFB132Q7Z7B7 95 aa21.22■□□□□ 0.99
TOP3B-211ENST00000449704 ZNF316A6NFI3 1004 aaPredicted RBP21.21■□□□□ 0.99
TOP3B-211ENST00000449704 IL13P35225 146 aa21.21■□□□□ 0.99
TOP3B-211ENST00000449704 PPP2R1AP30153 589 aa21.2■□□□□ 0.98
TOP3B-211ENST00000449704 BAG6P46379 1132 aa21.2■□□□□ 0.98
TOP3B-211ENST00000449704 IGSF1Q8N6C5 1336 aa21.2■□□□□ 0.98
TOP3B-211ENST00000449704 DIAPH1O60610 1272 aaKnown RBP21.19■□□□□ 0.98
TOP3B-211ENST00000449704 APBA3O96018 575 aa21.19■□□□□ 0.98
TOP3B-211ENST00000449704 RGPD2P0DJD1 1756 aa21.18■□□□□ 0.98
TOP3B-211ENST00000449704 ACSBG1Q96GR2 724 aa21.18■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms