RNA–Protein interactions for RNA: ENST00000447669.6

RFFL-206, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RFFL, Length 2,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-206ENST00000447669 NHSL1Q5SYE7 1610 aa32.94■■■□□ 2.86
RFFL-206ENST00000447669 TCP11L2Q8N4U5 519 aa32.94■■■□□ 2.86
RFFL-206ENST00000447669 AEBP1Q8IUX7 1158 aa32.92■■■□□ 2.86
RFFL-206ENST00000447669 PIP4K2BP78356 416 aa32.91■■■□□ 2.86
RFFL-206ENST00000447669 RSPH6AQ9H0K4 717 aa32.91■■■□□ 2.86
RFFL-206ENST00000447669 ARHGEF25Q86VW2 580 aa32.9■■■□□ 2.86
RFFL-206ENST00000447669 CDCA7LQ96GN5 454 aa32.9■■■□□ 2.86
RFFL-206ENST00000447669 PRKAR2BP31323 418 aa32.9■■■□□ 2.86
RFFL-206ENST00000447669 IP6K1Q92551 441 aa32.88■■■□□ 2.85
RFFL-206ENST00000447669 PHRF1Q9P1Y6 1649 aaKnown RBP32.88■■■□□ 2.85
RFFL-206ENST00000447669 ARHGEF10O15013 1369 aa32.88■■■□□ 2.85
RFFL-206ENST00000447669 FCHSD2O94868 740 aa32.87■■■□□ 2.85
RFFL-206ENST00000447669 IQSEC2Q5JU85 1478 aa32.87■■■□□ 2.85
RFFL-206ENST00000447669 SULT6B1Q6IMI4 303 aa32.87■■■□□ 2.85
RFFL-206ENST00000447669 PHACTR3Q96KR7 559 aa32.87■■■□□ 2.85
RFFL-206ENST00000447669 AXIN2Q9Y2T1 843 aa32.86■■■□□ 2.85
RFFL-206ENST00000447669 CRYBG1Q9Y4K1 1723 aa32.86■■■□□ 2.85
RFFL-206ENST00000447669 EYA1Q99502 592 aa32.85■■■□□ 2.85
RFFL-206ENST00000447669 RGPD1P0DJD0 1748 aa32.83■■■□□ 2.85
RFFL-206ENST00000447669 KIF24Q5T7B8 1368 aa32.83■■■□□ 2.85
RFFL-206ENST00000447669 UBAP1LF5GYI3 381 aa32.82■■■□□ 2.84
RFFL-206ENST00000447669 TOM1O60784 492 aa32.82■■■□□ 2.84
RFFL-206ENST00000447669 RGPD5Q99666 1765 aa32.82■■■□□ 2.84
RFFL-206ENST00000447669 MAPK8IP3Q9UPT6 1336 aa32.82■■■□□ 2.84
RFFL-206ENST00000447669 RTL1A6NKG5 1358 aa32.82■■■□□ 2.84
RFFL-206ENST00000447669 CHRNA2Q15822 529 aa32.82■■■□□ 2.84
RFFL-206ENST00000447669 ZNF521Q96K83 1311 aa32.81■■■□□ 2.84
RFFL-206ENST00000447669 USHBP1Q8N6Y0 703 aa32.8■■■□□ 2.84
RFFL-206ENST00000447669 TMPOP42166 694 aaKnown RBP32.78■■■□□ 2.84
RFFL-206ENST00000447669 RGPD2P0DJD1 1756 aa32.78■■■□□ 2.84
RFFL-206ENST00000447669 WWC1Q8IX03 1113 aa32.77■■■□□ 2.84
RFFL-206ENST00000447669 LRRC59Q96AG4 307 aaKnown RBP32.77■■■□□ 2.84
RFFL-206ENST00000447669 SPINK5Q9NQ38 1064 aaPredicted RBP32.77■■■□□ 2.84
RFFL-206ENST00000447669 KIAA0232Q92628 1395 aa32.77■■■□□ 2.84
RFFL-206ENST00000447669 AHDC1Q5TGY3 1603 aaPredicted RBP32.75■■■□□ 2.83
RFFL-206ENST00000447669 IGSF1Q8N6C5 1336 aa32.75■■■□□ 2.83
RFFL-206ENST00000447669 PNNQ9H307 717 aaKnown RBP32.75■■■□□ 2.83
RFFL-206ENST00000447669 HAP1P54257 671 aaPredicted RBP32.74■■■□□ 2.83
RFFL-206ENST00000447669 NBPF6Q5VWK0 638 aa32.74■■■□□ 2.83
RFFL-206ENST00000447669 NBPF4Q96M43 638 aa32.74■■■□□ 2.83
RFFL-206ENST00000447669 RIPK4P57078 832 aa32.73■■■□□ 2.83
RFFL-206ENST00000447669 CERKQ8TCT0 537 aa32.73■■■□□ 2.83
RFFL-206ENST00000447669 ANKRD24Q8TF21 1146 aa32.73■■■□□ 2.83
RFFL-206ENST00000447669 ABCA3Q99758 1704 aa32.72■■■□□ 2.83
RFFL-206ENST00000447669 PHLPP1O60346 1717 aa32.71■■■□□ 2.83
RFFL-206ENST00000447669 GOLGA2Q08379 1002 aa32.71■■■□□ 2.83
RFFL-206ENST00000447669 TRIM35Q9UPQ4 493 aa32.71■■■□□ 2.83
RFFL-206ENST00000447669 COL18A1P39060 1754 aa32.71■■■□□ 2.83
RFFL-206ENST00000447669 PDE3BQ13370 1112 aa32.7■■■□□ 2.83
RFFL-206ENST00000447669 PHF23Q9BUL5 403 aaPredicted RBP32.7■■■□□ 2.82
RFFL-206ENST00000447669 NEFMP07197 916 aa32.69■■■□□ 2.82
RFFL-206ENST00000447669 KDRP35968 1356 aa32.67■■■□□ 2.82
RFFL-206ENST00000447669 NFE2L2Q16236 605 aa32.67■■■□□ 2.82
RFFL-206ENST00000447669 PRDM11Q9NQV5 511 aa32.67■■■□□ 2.82
RFFL-206ENST00000447669 DLG5Q8TDM6 1919 aa32.66■■■□□ 2.82
RFFL-206ENST00000447669 CPDO75976 1380 aa32.65■■■□□ 2.82
RFFL-206ENST00000447669 SUPT16HQ9Y5B9 1047 aaKnown RBP32.65■■■□□ 2.82
RFFL-206ENST00000447669 COL16A1Q07092 1604 aaPredicted RBP32.65■■■□□ 2.82
RFFL-206ENST00000447669 SLFN5Q08AF3 891 aa32.65■■■□□ 2.82
RFFL-206ENST00000447669 NGEFQ8N5V2 710 aa32.65■■■□□ 2.82
RFFL-206ENST00000447669 GTF3C3Q9Y5Q9 886 aa32.65■■■□□ 2.82
RFFL-206ENST00000447669 ERBB3P21860 1342 aa32.64■■■□□ 2.82
RFFL-206ENST00000447669 CCDC27Q2M243 656 aa32.64■■■□□ 2.82
RFFL-206ENST00000447669 DUSP27Q5VZP5 1158 aa32.63■■■□□ 2.81
RFFL-206ENST00000447669 THUMPD2Q9BTF0 503 aaKnown RBP32.63■■■□□ 2.81
RFFL-206ENST00000447669 FAM83GA6ND36 823 aa32.61■■■□□ 2.81
RFFL-206ENST00000447669 MTHFSDQ2M296 383 aaKnown RBP32.6■■■□□ 2.81
RFFL-206ENST00000447669 DCTN1Q14203 1278 aa32.59■■■□□ 2.81
RFFL-206ENST00000447669 CSB-PGBD3P0DP91 1061 aa32.58■■■□□ 2.81
RFFL-206ENST00000447669 CAMTA1Q9Y6Y1 1673 aa32.58■■■□□ 2.81
RFFL-206ENST00000447669 NLRP2Q9NX02 1062 aa32.57■■■□□ 2.8
RFFL-206ENST00000447669 WDR63Q8IWG1 891 aa32.56■■■□□ 2.8
RFFL-206ENST00000447669 TRMT2AQ8IZ69 625 aaKnown RBP32.56■■■□□ 2.8
RFFL-206ENST00000447669 E9PSI1 815 aa32.55■■■□□ 2.8
RFFL-206ENST00000447669 NCBP3Q53F19 620 aaKnown RBP32.54■■■□□ 2.8
RFFL-206ENST00000447669 COL22A1Q8NFW1 1626 aaPredicted RBP32.53■■■□□ 2.8
RFFL-206ENST00000447669 LMO7Q8WWI1 1683 aa32.53■■■□□ 2.8
RFFL-206ENST00000447669 NUTM2BA6NNL0 878 aaPredicted RBP32.51■■■□□ 2.79
RFFL-206ENST00000447669 NUTM2EB1AL46 878 aaPredicted RBP32.51■■■□□ 2.79
RFFL-206ENST00000447669 NUTM2AQ8IVF1 878 aaPredicted RBP32.51■■■□□ 2.79
RFFL-206ENST00000447669 TSR2Q969E8 191 aaKnown RBP32.51■■■□□ 2.79
RFFL-206ENST00000447669 MCM10Q7L590 875 aa32.5■■■□□ 2.79
RFFL-206ENST00000447669 STRN4Q9NRL3 753 aa32.5■■■□□ 2.79
RFFL-206ENST00000447669 ADAMTS2O95450 1211 aa32.5■■■□□ 2.79
RFFL-206ENST00000447669 LAS1LQ9Y4W2 734 aaKnown RBP32.48■■■□□ 2.79
RFFL-206ENST00000447669 ABCC6O95255 1503 aa32.48■■■□□ 2.79
RFFL-206ENST00000447669 NCAPD2Q15021 1401 aa32.48■■■□□ 2.79
RFFL-206ENST00000447669 IRX6P78412 446 aaPredicted RBP32.48■■■□□ 2.79
RFFL-206ENST00000447669 COL5A2P05997 1499 aaPredicted RBP32.46■■■□□ 2.79
RFFL-206ENST00000447669 BTG4Q9NY30 223 aa32.46■■■□□ 2.79
RFFL-206ENST00000447669 RCAN3Q9UKA8 241 aa32.46■■■□□ 2.79
RFFL-206ENST00000447669 FAM208AQ9UK61 1670 aaKnown RBP32.45■■■□□ 2.78
RFFL-206ENST00000447669 LARP1Q6PKG0 1096 aaKnown RBP32.44■■■□□ 2.78
RFFL-206ENST00000447669 GAS2L2Q8NHY3 880 aa32.44■■■□□ 2.78
RFFL-206ENST00000447669 TOM1L2Q6ZVM7 507 aa32.43■■■□□ 2.78
RFFL-206ENST00000447669 WDR17Q8IZU2 1322 aa32.43■■■□□ 2.78
RFFL-206ENST00000447669 EVA1CP58658 441 aa32.43■■■□□ 2.78
RFFL-206ENST00000447669 FANCIQ9NVI1 1328 aa32.41■■■□□ 2.78
RFFL-206ENST00000447669 LMOD3Q0VAK6 560 aa32.41■■■□□ 2.78
RFFL-206ENST00000447669 MYH16Q9H6N6 1097 aa32.39■■■□□ 2.78
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms