RNA–Protein interactions for RNA: ENST00000445704.1

HDAC4-203, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-203ENST00000445704 AXIN2Q9Y2T1 843 aa26.21■■□□□ 1.79
HDAC4-203ENST00000445704 USP35Q9P2H5 1018 aa26.19■■□□□ 1.78
HDAC4-203ENST00000445704 RGPD5Q99666 1765 aa26.19■■□□□ 1.78
HDAC4-203ENST00000445704 CRB1P82279 1406 aa26.16■■□□□ 1.78
HDAC4-203ENST00000445704 LTN1O94822 1766 aa26.16■■□□□ 1.78
HDAC4-203ENST00000445704 ABCC6O95255 1503 aa26.16■■□□□ 1.78
HDAC4-203ENST00000445704 KRT27Q7Z3Y8 459 aa26.16■■□□□ 1.78
HDAC4-203ENST00000445704 BARGINQ6ZT62 677 aa26.13■■□□□ 1.77
HDAC4-203ENST00000445704 TCP11L2Q8N4U5 519 aa26.13■■□□□ 1.77
HDAC4-203ENST00000445704 CARD14Q9BXL6 1004 aa26.13■■□□□ 1.77
HDAC4-203ENST00000445704 POLR3GLQ9BT43 218 aa26.12■■□□□ 1.77
HDAC4-203ENST00000445704 WDR17Q8IZU2 1322 aa26.12■■□□□ 1.77
HDAC4-203ENST00000445704 EP400Q96L91 3159 aa26.11■■□□□ 1.77
HDAC4-203ENST00000445704 FYB1O15117 783 aa26.11■■□□□ 1.77
HDAC4-203ENST00000445704 COG3Q96JB2 828 aa26.11■■□□□ 1.77
HDAC4-203ENST00000445704 KIF20BQ96Q89 1820 aa26.11■■□□□ 1.77
HDAC4-203ENST00000445704 GGNBP2Q9H3C7 697 aa26.1■■□□□ 1.77
HDAC4-203ENST00000445704 NSD3Q9BZ95 1437 aa26.1■■□□□ 1.77
HDAC4-203ENST00000445704 FAM182BQ5T319 152 aa26.09■■□□□ 1.77
HDAC4-203ENST00000445704 TOM1L2Q6ZVM7 507 aa26.09■■□□□ 1.77
HDAC4-203ENST00000445704 THRAP3Q9Y2W1 955 aaKnown RBP26.09■■□□□ 1.77
HDAC4-203ENST00000445704 C11orf95C9JLR9 678 aaPredicted RBP26.08■■□□□ 1.77
HDAC4-203ENST00000445704 FBLN1P23142 703 aa26.07■■□□□ 1.76
HDAC4-203ENST00000445704 WNK3Q9BYP7 1800 aa26.07■■□□□ 1.76
HDAC4-203ENST00000445704 BLMP54132 1417 aaPredicted RBP26.06■■□□□ 1.76
HDAC4-203ENST00000445704 PARP4Q9UKK3 1724 aaKnown RBP26.06■■□□□ 1.76
HDAC4-203ENST00000445704 CSB-PGBD3P0DP91 1061 aa26.05■■□□□ 1.76
HDAC4-203ENST00000445704 ERBB3P21860 1342 aa26.04■■□□□ 1.76
HDAC4-203ENST00000445704 MAP3K19Q56UN5 1328 aa26.04■■□□□ 1.76
HDAC4-203ENST00000445704 CCDC125Q86Z20 511 aa26.03■■□□□ 1.76
HDAC4-203ENST00000445704 LRRC37A3O60309 1634 aa26.03■■□□□ 1.76
HDAC4-203ENST00000445704 CARD10Q9BWT7 1032 aa26.02■■□□□ 1.76
HDAC4-203ENST00000445704 DISP2A7MBM2 1401 aa26■■□□□ 1.75
HDAC4-203ENST00000445704 ANKRD24Q8TF21 1146 aa26■■□□□ 1.75
HDAC4-203ENST00000445704 IP6K1Q92551 441 aa26■■□□□ 1.75
HDAC4-203ENST00000445704 HOXC9P31274 260 aa25.98■■□□□ 1.75
HDAC4-203ENST00000445704 RRS1Q15050 365 aaKnown RBP25.98■■□□□ 1.75
HDAC4-203ENST00000445704 CCDC7Q96M83 1385 aa25.97■■□□□ 1.75
HDAC4-203ENST00000445704 PDE3BQ13370 1112 aa25.97■■□□□ 1.75
HDAC4-203ENST00000445704 KIF7Q2M1P5 1343 aa25.96■■□□□ 1.75
HDAC4-203ENST00000445704 DEFB132Q7Z7B7 95 aa25.96■■□□□ 1.75
HDAC4-203ENST00000445704 PANK3Q9H999 370 aa25.96■■□□□ 1.75
HDAC4-203ENST00000445704 RGPD1P0DJD0 1748 aa25.96■■□□□ 1.75
HDAC4-203ENST00000445704 PEAK1Q9H792 1746 aa25.95■■□□□ 1.74
HDAC4-203ENST00000445704 TNS1Q9HBL0 1735 aaKnown RBP25.95■■□□□ 1.74
HDAC4-203ENST00000445704 AMPHP49418 695 aa25.95■■□□□ 1.74
HDAC4-203ENST00000445704 NLRP2Q9NX02 1062 aa25.95■■□□□ 1.74
HDAC4-203ENST00000445704 RTL1A6NKG5 1358 aa25.95■■□□□ 1.74
HDAC4-203ENST00000445704 CGNL1Q0VF96 1302 aa25.94■■□□□ 1.74
HDAC4-203ENST00000445704 FAM208AQ9UK61 1670 aaKnown RBP25.93■■□□□ 1.74
HDAC4-203ENST00000445704 SF3B2Q13435 895 aaKnown RBP25.93■■□□□ 1.74
HDAC4-203ENST00000445704 FAM196AQ6ZSG2 479 aa25.93■■□□□ 1.74
HDAC4-203ENST00000445704 LTV1Q96GA3 475 aaPredicted RBP25.93■■□□□ 1.74
HDAC4-203ENST00000445704 ANKRD26Q9UPS8 1709 aa25.92■■□□□ 1.74
HDAC4-203ENST00000445704 DDB1Q16531 1140 aa25.92■■□□□ 1.74
HDAC4-203ENST00000445704 CDCA7Q9BWT1 371 aaPredicted RBP25.92■■□□□ 1.74
HDAC4-203ENST00000445704 RGPD2P0DJD1 1756 aa25.89■■□□□ 1.73
HDAC4-203ENST00000445704 OVOS2A0A0G2JMS6 1433 aa25.88■■□□□ 1.73
HDAC4-203ENST00000445704 TRIM37O94972 964 aa25.88■■□□□ 1.73
HDAC4-203ENST00000445704 EMILIN1Q9Y6C2 1016 aa25.88■■□□□ 1.73
HDAC4-203ENST00000445704 TNS2Q63HR2 1409 aa25.88■■□□□ 1.73
HDAC4-203ENST00000445704 MARCH10Q8NA82 808 aaPredicted RBP25.87■■□□□ 1.73
HDAC4-203ENST00000445704 FLT4P35916 1363 aa25.86■■□□□ 1.73
HDAC4-203ENST00000445704 KIF24Q5T7B8 1368 aa25.85■■□□□ 1.73
HDAC4-203ENST00000445704 IL2RBP14784 551 aa25.85■■□□□ 1.73
HDAC4-203ENST00000445704 BAG6P46379 1132 aa25.85■■□□□ 1.73
HDAC4-203ENST00000445704 HSP90AB2PQ58FF8 381 aa25.85■■□□□ 1.73
HDAC4-203ENST00000445704 INSRP06213 1382 aa25.84■■□□□ 1.73
HDAC4-203ENST00000445704 EXOC5O00471 708 aa25.83■■□□□ 1.73
HDAC4-203ENST00000445704 SBF2Q86WG5 1849 aa25.82■■□□□ 1.72
HDAC4-203ENST00000445704 EN1Q05925 392 aaPredicted RBP25.82■■□□□ 1.72
HDAC4-203ENST00000445704 NSD2O96028 1365 aa25.82■■□□□ 1.72
HDAC4-203ENST00000445704 MAP2P11137 1827 aaKnown RBP25.81■■□□□ 1.72
HDAC4-203ENST00000445704 NBPF6Q5VWK0 638 aa25.81■■□□□ 1.72
HDAC4-203ENST00000445704 NBPF4Q96M43 638 aa25.81■■□□□ 1.72
HDAC4-203ENST00000445704 WASHC2AQ641Q2 1341 aa25.81■■□□□ 1.72
HDAC4-203ENST00000445704 SMG6Q86US8 1419 aaKnown RBP25.8■■□□□ 1.72
HDAC4-203ENST00000445704 TNNT2P45379 298 aaPredicted RBP25.8■■□□□ 1.72
HDAC4-203ENST00000445704 POLKQ9UBT6 870 aa25.8■■□□□ 1.72
HDAC4-203ENST00000445704 BCL9O00512 1426 aa25.8■■□□□ 1.72
HDAC4-203ENST00000445704 PPM1GO15355 546 aaPredicted RBP25.79■■□□□ 1.72
HDAC4-203ENST00000445704 USHBP1Q8N6Y0 703 aa25.79■■□□□ 1.72
HDAC4-203ENST00000445704 MEGF6O75095 1541 aa25.78■■□□□ 1.72
HDAC4-203ENST00000445704 APBA3O96018 575 aa25.78■■□□□ 1.72
HDAC4-203ENST00000445704 KNSTRNQ9Y448 316 aa25.78■■□□□ 1.72
HDAC4-203ENST00000445704 PTF1AQ7RTS3 328 aa25.77■■□□□ 1.72
HDAC4-203ENST00000445704 EZH2Q15910 746 aaKnown RBP25.76■■□□□ 1.71
HDAC4-203ENST00000445704 AMER1Q5JTC6 1135 aaPredicted RBP25.76■■□□□ 1.71
HDAC4-203ENST00000445704 CAMKK2Q96RR4 588 aa25.75■■□□□ 1.71
HDAC4-203ENST00000445704 SHANK3Q9BYB0 1731 aa25.74■■□□□ 1.71
HDAC4-203ENST00000445704 PER1O15534 1290 aaPredicted RBP25.73■■□□□ 1.71
HDAC4-203ENST00000445704 MORC1Q86VD1 984 aa25.73■■□□□ 1.71
HDAC4-203ENST00000445704 RREB1Q92766 1687 aa25.72■■□□□ 1.71
HDAC4-203ENST00000445704 BCL11BQ9C0K0 894 aaPredicted RBP25.71■■□□□ 1.71
HDAC4-203ENST00000445704 NCAPD2Q15021 1401 aa25.71■■□□□ 1.71
HDAC4-203ENST00000445704 NHSQ6T4R5 1651 aa25.7■■□□□ 1.7
HDAC4-203ENST00000445704 PARD3Q8TEW0 1356 aa25.69■■□□□ 1.7
HDAC4-203ENST00000445704 KCNQ2O43526 872 aa25.68■■□□□ 1.7
HDAC4-203ENST00000445704 DDX54Q8TDD1 881 aaKnown RBP25.68■■□□□ 1.7
HDAC4-203ENST00000445704 NUP188Q5SRE5 1749 aa25.68■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms