RNA–Protein interactions for RNA: ENST00000444533.5

SSBP3-208, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-208ENST00000444533 AMER1Q5JTC6 1135 aaPredicted RBP19.16■□□□□ 0.66
SSBP3-208ENST00000444533 CC2D1BQ5T0F9 858 aaKnown RBP19.16■□□□□ 0.66
SSBP3-208ENST00000444533 GJD4Q96KN9 370 aaPredicted RBP19.16■□□□□ 0.66
SSBP3-208ENST00000444533 ATRNO75882 1429 aa19.16■□□□□ 0.66
SSBP3-208ENST00000444533 DDX10Q13206 875 aaKnown RBP19.15■□□□□ 0.66
SSBP3-208ENST00000444533 CNGB1Q14028 1251 aaPredicted RBP19.15■□□□□ 0.66
SSBP3-208ENST00000444533 RRS1Q15050 365 aaKnown RBP19.15■□□□□ 0.66
SSBP3-208ENST00000444533 IP6K1Q92551 441 aa19.15■□□□□ 0.66
SSBP3-208ENST00000444533 MAP3K19Q56UN5 1328 aa19.15■□□□□ 0.66
SSBP3-208ENST00000444533 RTL1A6NKG5 1358 aa19.15■□□□□ 0.66
SSBP3-208ENST00000444533 TOM1L2Q6ZVM7 507 aa19.14■□□□□ 0.65
SSBP3-208ENST00000444533 KIF24Q5T7B8 1368 aa19.14■□□□□ 0.65
SSBP3-208ENST00000444533 NPC1L1Q9UHC9 1359 aa19.14■□□□□ 0.65
SSBP3-208ENST00000444533 BLMP54132 1417 aaPredicted RBP19.14■□□□□ 0.65
SSBP3-208ENST00000444533 ANKRD26Q9UPS8 1709 aa19.14■□□□□ 0.65
SSBP3-208ENST00000444533 A0A0G2JS52 829 aa19.13■□□□□ 0.65
SSBP3-208ENST00000444533 MYT1Q01538 1121 aa19.13■□□□□ 0.65
SSBP3-208ENST00000444533 SMG6Q86US8 1419 aaKnown RBP19.13■□□□□ 0.65
SSBP3-208ENST00000444533 CAMTA1Q9Y6Y1 1673 aa19.13■□□□□ 0.65
SSBP3-208ENST00000444533 LTN1O94822 1766 aa19.13■□□□□ 0.65
SSBP3-208ENST00000444533 COL5A2P05997 1499 aaPredicted RBP19.12■□□□□ 0.65
SSBP3-208ENST00000444533 HOXC9P31274 260 aa19.12■□□□□ 0.65
SSBP3-208ENST00000444533 LMO7Q8WWI1 1683 aa19.11■□□□□ 0.65
SSBP3-208ENST00000444533 FLT4P35916 1363 aa19.11■□□□□ 0.65
SSBP3-208ENST00000444533 WDR17Q8IZU2 1322 aa19.11■□□□□ 0.65
SSBP3-208ENST00000444533 FBLN1P23142 703 aa19.11■□□□□ 0.65
SSBP3-208ENST00000444533 LARP1Q6PKG0 1096 aaKnown RBP19.11■□□□□ 0.65
SSBP3-208ENST00000444533 USP35Q9P2H5 1018 aa19.11■□□□□ 0.65
SSBP3-208ENST00000444533 AXIN2Q9Y2T1 843 aa19.11■□□□□ 0.65
SSBP3-208ENST00000444533 SPATA31A5Q5VU36 1347 aa19.1■□□□□ 0.65
SSBP3-208ENST00000444533 SPATA31A7Q8IWB4 1347 aa19.1■□□□□ 0.65
SSBP3-208ENST00000444533 ANKRD24Q8TF21 1146 aa19.1■□□□□ 0.65
SSBP3-208ENST00000444533 NRAPQ86VF7 1730 aa19.1■□□□□ 0.65
SSBP3-208ENST00000444533 CRB1P82279 1406 aa19.09■□□□□ 0.65
SSBP3-208ENST00000444533 TCP11L2Q8N4U5 519 aa19.09■□□□□ 0.65
SSBP3-208ENST00000444533 LTV1Q96GA3 475 aaPredicted RBP19.09■□□□□ 0.65
SSBP3-208ENST00000444533 NLRP2Q9NX02 1062 aa19.09■□□□□ 0.65
SSBP3-208ENST00000444533 THRAP3Q9Y2W1 955 aaKnown RBP19.09■□□□□ 0.65
SSBP3-208ENST00000444533 ERBB3P21860 1342 aa19.08■□□□□ 0.65
SSBP3-208ENST00000444533 SPATA31A1Q5TZJ5 1347 aa19.08■□□□□ 0.65
SSBP3-208ENST00000444533 EMILIN1Q9Y6C2 1016 aa19.08■□□□□ 0.64
SSBP3-208ENST00000444533 COL18A1P39060 1754 aa19.07■□□□□ 0.64
SSBP3-208ENST00000444533 POLKQ9UBT6 870 aa19.07■□□□□ 0.64
SSBP3-208ENST00000444533 CDK12Q9NYV4 1490 aaPredicted RBP19.07■□□□□ 0.64
SSBP3-208ENST00000444533 INSRP06213 1382 aa19.06■□□□□ 0.64
SSBP3-208ENST00000444533 FAM98CQ17RN3 349 aaKnown RBP19.06■□□□□ 0.64
SSBP3-208ENST00000444533 CARD10Q9BWT7 1032 aa19.06■□□□□ 0.64
SSBP3-208ENST00000444533 HSP90AB2PQ58FF8 381 aa19.04■□□□□ 0.64
SSBP3-208ENST00000444533 BARGINQ6ZT62 677 aa19.04■□□□□ 0.64
SSBP3-208ENST00000444533 CDCA7Q9BWT1 371 aaPredicted RBP19.04■□□□□ 0.64
SSBP3-208ENST00000444533 MAP2P11137 1827 aaKnown RBP19.04■□□□□ 0.64
SSBP3-208ENST00000444533 RGPD5Q99666 1765 aa19.03■□□□□ 0.64
SSBP3-208ENST00000444533 SEPT12Q8IYM1 358 aa19.02■□□□□ 0.64
SSBP3-208ENST00000444533 CFAP53Q96M91 514 aa19.02■□□□□ 0.64
SSBP3-208ENST00000444533 GLI3P10071 1580 aa19.02■□□□□ 0.63
SSBP3-208ENST00000444533 MTHFSP49914 203 aa19.01■□□□□ 0.63
SSBP3-208ENST00000444533 FAM208AQ9UK61 1670 aaKnown RBP19.01■□□□□ 0.63
SSBP3-208ENST00000444533 ONECUT3O60422 494 aaPredicted RBP19■□□□□ 0.63
SSBP3-208ENST00000444533 RALBP1Q15311 655 aa19■□□□□ 0.63
SSBP3-208ENST00000444533 RGS12O14924 1447 aa19■□□□□ 0.63
SSBP3-208ENST00000444533 PDE3BQ13370 1112 aa18.99■□□□□ 0.63
SSBP3-208ENST00000444533 ILDR2Q71H61 639 aa18.99■□□□□ 0.63
SSBP3-208ENST00000444533 PEAK1Q9H792 1746 aa18.97■□□□□ 0.63
SSBP3-208ENST00000444533 IL2RBP14784 551 aa18.97■□□□□ 0.63
SSBP3-208ENST00000444533 RAPGEF4Q8WZA2 1011 aa18.97■□□□□ 0.63
SSBP3-208ENST00000444533 DDB1Q16531 1140 aa18.96■□□□□ 0.63
SSBP3-208ENST00000444533 KRT27Q7Z3Y8 459 aa18.96■□□□□ 0.63
SSBP3-208ENST00000444533 EXOC5O00471 708 aa18.95■□□□□ 0.62
SSBP3-208ENST00000444533 PPP2R1AP30153 589 aa18.95■□□□□ 0.62
SSBP3-208ENST00000444533 EIF4A2Q14240 407 aaKnown RBP18.95■□□□□ 0.62
SSBP3-208ENST00000444533 PARD3Q8TEW0 1356 aa18.94■□□□□ 0.62
SSBP3-208ENST00000444533 DIAPH1O60610 1272 aaKnown RBP18.94■□□□□ 0.62
SSBP3-208ENST00000444533 NBPF6Q5VWK0 638 aa18.94■□□□□ 0.62
SSBP3-208ENST00000444533 NBPF4Q96M43 638 aa18.94■□□□□ 0.62
SSBP3-208ENST00000444533 NUDCQ9Y266 331 aa18.94■□□□□ 0.62
SSBP3-208ENST00000444533 TATP17735 454 aaPredicted RBP18.93■□□□□ 0.62
SSBP3-208ENST00000444533 ANP32CO43423 234 aa18.92■□□□□ 0.62
SSBP3-208ENST00000444533 USHBP1Q8N6Y0 703 aa18.92■□□□□ 0.62
SSBP3-208ENST00000444533 EYA1Q99502 592 aa18.91■□□□□ 0.62
SSBP3-208ENST00000444533 THSD7AQ9UPZ6 1657 aa18.9■□□□□ 0.62
SSBP3-208ENST00000444533 MYBBP1AQ9BQG0 1328 aaKnown RBP18.9■□□□□ 0.62
SSBP3-208ENST00000444533 U2SURPO15042 1029 aaKnown RBP18.89■□□□□ 0.61
SSBP3-208ENST00000444533 IL13P35225 146 aa18.88■□□□□ 0.61
SSBP3-208ENST00000444533 PRKRIP1Q9H875 184 aaPredicted RBP18.88■□□□□ 0.61
SSBP3-208ENST00000444533 PARP4Q9UKK3 1724 aaKnown RBP18.88■□□□□ 0.61
SSBP3-208ENST00000444533 DISP2A7MBM2 1401 aa18.87■□□□□ 0.61
SSBP3-208ENST00000444533 FAM196AQ6ZSG2 479 aa18.87■□□□□ 0.61
SSBP3-208ENST00000444533 IGSF1Q8N6C5 1336 aa18.87■□□□□ 0.61
SSBP3-208ENST00000444533 ZCRB1Q8TBF4 217 aaKnown RBP18.87■□□□□ 0.61
SSBP3-208ENST00000444533 SPG7Q9UQ90 795 aa18.87■□□□□ 0.61
SSBP3-208ENST00000444533 TNS2Q63HR2 1409 aa18.86■□□□□ 0.61
SSBP3-208ENST00000444533 SF3B2Q13435 895 aaKnown RBP18.86■□□□□ 0.61
SSBP3-208ENST00000444533 SULT6B1Q6IMI4 303 aa18.86■□□□□ 0.61
SSBP3-208ENST00000444533 WNK3Q9BYP7 1800 aa18.86■□□□□ 0.61
SSBP3-208ENST00000444533 RGPD2P0DJD1 1756 aa18.86■□□□□ 0.61
SSBP3-208ENST00000444533 BRWD3Q6RI45 1802 aa18.84■□□□□ 0.61
SSBP3-208ENST00000444533 DDX54Q8TDD1 881 aaKnown RBP18.84■□□□□ 0.61
SSBP3-208ENST00000444533 OVOS2A0A0G2JMS6 1433 aa18.83■□□□□ 0.61
SSBP3-208ENST00000444533 PCDH11XQ9BZA7 1347 aa18.83■□□□□ 0.61
SSBP3-208ENST00000444533 PCDH11YQ9BZA8 1340 aa18.83■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms