RNA–Protein interactions for RNA: ENST00000443638.1

TM9SF3-202, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 3

Gene TM9SF3, Length 868 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-202ENST00000443638 ASB16Q96NS5 453 aa8.08□□□□□ -1.12
TM9SF3-202ENST00000443638 OCSTAMPQ9BR26 566 aa8.08□□□□□ -1.12
TM9SF3-202ENST00000443638 CXXC1Q9P0U4 656 aaPredicted RBP8.08□□□□□ -1.12
TM9SF3-202ENST00000443638 GPSM3Q9Y4H4 160 aa8.08□□□□□ -1.12
TM9SF3-202ENST00000443638 MCCD1P59942 119 aaPredicted RBP8.07□□□□□ -1.12
TM9SF3-202ENST00000443638 KCNH2Q12809 1159 aa8.07□□□□□ -1.12
TM9SF3-202ENST00000443638 Q3C1V9 767 aa8.07□□□□□ -1.12
TM9SF3-202ENST00000443638 MAP7D1Q3KQU3 841 aa8.07□□□□□ -1.12
TM9SF3-202ENST00000443638 SLFNL1Q499Z3 407 aa8.07□□□□□ -1.12
TM9SF3-202ENST00000443638 SIX5Q8N196 739 aa8.07□□□□□ -1.12
TM9SF3-202ENST00000443638 SLC27A5Q9Y2P5 690 aa8.07□□□□□ -1.12
TM9SF3-202ENST00000443638 AXIN2Q9Y2T1 843 aa8.07□□□□□ -1.12
TM9SF3-202ENST00000443638 ARHGAP33O14559 1287 aa8.06□□□□□ -1.12
TM9SF3-202ENST00000443638 LARGE2Q8N3Y3 721 aa8.06□□□□□ -1.12
TM9SF3-202ENST00000443638 UBXN4Q92575 508 aa8.06□□□□□ -1.12
TM9SF3-202ENST00000443638 ZNF592Q92610 1267 aa8.06□□□□□ -1.12
TM9SF3-202ENST00000443638 SPATA32Q96LK8 384 aa8.06□□□□□ -1.12
TM9SF3-202ENST00000443638 KCNK17Q96T54 332 aa8.06□□□□□ -1.12
TM9SF3-202ENST00000443638 DNAAF2Q9NVR5 837 aaKnown RBP8.06□□□□□ -1.12
TM9SF3-202ENST00000443638 HCSTQ9UBK5 93 aa8.06□□□□□ -1.12
TM9SF3-202ENST00000443638 RABGEF1Q9UJ41 708 aa8.06□□□□□ -1.12
TM9SF3-202ENST00000443638 H3BRB1 525 aa8.05□□□□□ -1.12
TM9SF3-202ENST00000443638 ZBTB7BO15156 539 aaPredicted RBP8.05□□□□□ -1.12
TM9SF3-202ENST00000443638 ZNF211Q13398 564 aaPredicted RBP8.05□□□□□ -1.12
TM9SF3-202ENST00000443638 EML3Q32P44 896 aa8.05□□□□□ -1.12
TM9SF3-202ENST00000443638 NAALADL2Q58DX5 795 aa8.05□□□□□ -1.12
TM9SF3-202ENST00000443638 ADGRD1Q6QNK2 874 aa8.05□□□□□ -1.12
TM9SF3-202ENST00000443638 TRIM50Q86XT4 487 aa8.05□□□□□ -1.12
TM9SF3-202ENST00000443638 ZNF594Q96JF6 807 aaPredicted RBP8.05□□□□□ -1.12
TM9SF3-202ENST00000443638 TUT1Q9H6E5 874 aaKnown RBP8.05□□□□□ -1.12
TM9SF3-202ENST00000443638 MAP10Q9P2G4 905 aa8.05□□□□□ -1.12
TM9SF3-202ENST00000443638 SEPT9Q9UHD8 586 aaPredicted RBP8.05□□□□□ -1.12
TM9SF3-202ENST00000443638 PRMT3O60678 531 aa8.04□□□□□ -1.12
TM9SF3-202ENST00000443638 SLC4A3P48751 1232 aa8.04□□□□□ -1.12
TM9SF3-202ENST00000443638 ARHGAP4P98171 946 aa8.04□□□□□ -1.12
TM9SF3-202ENST00000443638 FAM98CQ17RN3 349 aaKnown RBP8.04□□□□□ -1.12
TM9SF3-202ENST00000443638 DCTN4Q9UJW0 460 aa8.04□□□□□ -1.12
TM9SF3-202ENST00000443638 KIAA1024Q9UPX6 916 aa8.04□□□□□ -1.12
TM9SF3-202ENST00000443638 TK2O00142 265 aa8.03□□□□□ -1.12
TM9SF3-202ENST00000443638 ACTN4O43707 911 aaKnown RBP8.03□□□□□ -1.12
TM9SF3-202ENST00000443638 C21orf2O43822 256 aa8.03□□□□□ -1.12
TM9SF3-202ENST00000443638 ATP1A2P50993 1020 aa8.03□□□□□ -1.12
TM9SF3-202ENST00000443638 MRPL58Q14197 206 aaKnown RBP8.03□□□□□ -1.12
TM9SF3-202ENST00000443638 RNF19BQ6ZMZ0 732 aa8.03□□□□□ -1.12
TM9SF3-202ENST00000443638 SLC4A5Q9BY07 1137 aa8.03□□□□□ -1.12
TM9SF3-202ENST00000443638 CADPSQ9ULU8 1353 aa8.02□□□□□ -1.13
TM9SF3-202ENST00000443638 SMARCA5O60264 1052 aaPredicted RBP8.02□□□□□ -1.13
TM9SF3-202ENST00000443638 ABL1P00519 1130 aa8.02□□□□□ -1.13
TM9SF3-202ENST00000443638 MAPK1P28482 360 aa8.02□□□□□ -1.13
TM9SF3-202ENST00000443638 HDGFP51858 240 aaKnown RBP8.02□□□□□ -1.13
TM9SF3-202ENST00000443638 SF3A1Q15459 793 aaKnown RBP8.02□□□□□ -1.13
TM9SF3-202ENST00000443638 PTPRNQ16849 979 aa8.02□□□□□ -1.13
TM9SF3-202ENST00000443638 TSGA10IPQ3SY00 556 aa8.02□□□□□ -1.13
TM9SF3-202ENST00000443638 PDXDC2PQ6P474 469 aa8.02□□□□□ -1.13
TM9SF3-202ENST00000443638 SAMD7Q7Z3H4 446 aa8.02□□□□□ -1.13
TM9SF3-202ENST00000443638 GLYCTKQ8IVS8 523 aa8.02□□□□□ -1.13
TM9SF3-202ENST00000443638 USB1Q9BQ65 265 aaKnown RBP8.02□□□□□ -1.13
TM9SF3-202ENST00000443638 PLA2G2EQ9NZK7 142 aa8.02□□□□□ -1.13
TM9SF3-202ENST00000443638 SALL2Q9Y467 1007 aaPredicted RBP8.02□□□□□ -1.13
TM9SF3-202ENST00000443638 PTK2Q05397 1052 aa8.01□□□□□ -1.13
TM9SF3-202ENST00000443638 PUS10Q3MIT2 529 aaKnown RBP8.01□□□□□ -1.13
TM9SF3-202ENST00000443638 KMT5BQ4FZB7 885 aa8.01□□□□□ -1.13
TM9SF3-202ENST00000443638 LDLRAD1Q5T700 205 aa8.01□□□□□ -1.13
TM9SF3-202ENST00000443638 BRICD5Q6PL45 260 aa8.01□□□□□ -1.13
TM9SF3-202ENST00000443638 BLOC1S3Q6QNY0 202 aa8.01□□□□□ -1.13
TM9SF3-202ENST00000443638 GPKOWQ92917 476 aaPredicted RBP eCLIP8.01□□□□□ -1.13
TM9SF3-202ENST00000443638 PRIMPOLQ96LW4 560 aa8.01□□□□□ -1.13
TM9SF3-202ENST00000443638 ANO2Q9NQ90 1003 aa8.01□□□□□ -1.13
TM9SF3-202ENST00000443638 NOD1Q9Y239 953 aa8.01□□□□□ -1.13
TM9SF3-202ENST00000443638 PCDHB9Q9Y5E1 797 aa8.01□□□□□ -1.13
TM9SF3-202ENST00000443638 DNMT3AQ9Y6K1 912 aaPredicted RBP8.01□□□□□ -1.13
TM9SF3-202ENST00000443638 SEC13P55735 322 aa8□□□□□ -1.13
TM9SF3-202ENST00000443638 TSNAXIP1Q2TAA8 658 aa8□□□□□ -1.13
TM9SF3-202ENST00000443638 ZSCAN29Q8IWY8 852 aaPredicted RBP8□□□□□ -1.13
TM9SF3-202ENST00000443638 RGL4Q8IZJ4 473 aa8□□□□□ -1.13
TM9SF3-202ENST00000443638 GTF3C2Q8WUA4 911 aaPredicted RBP8□□□□□ -1.13
TM9SF3-202ENST00000443638 JUNDP17535 347 aa7.99□□□□□ -1.13
TM9SF3-202ENST00000443638 BACH2Q9BYV9 841 aa7.99□□□□□ -1.13
TM9SF3-202ENST00000443638 SEPT3Q9UH03 358 aa7.99□□□□□ -1.13
TM9SF3-202ENST00000443638 HRO43593 1189 aa7.98□□□□□ -1.13
TM9SF3-202ENST00000443638 HDLBPQ00341 1268 aaKnown RBP7.98□□□□□ -1.13
TM9SF3-202ENST00000443638 FKBP4Q02790 459 aaKnown RBP eCLIP7.98□□□□□ -1.13
TM9SF3-202ENST00000443638 SF3B2Q13435 895 aaKnown RBP7.98□□□□□ -1.13
TM9SF3-202ENST00000443638 THAP11Q96EK4 314 aa7.98□□□□□ -1.13
TM9SF3-202ENST00000443638 CCDC85AQ96PX6 553 aaPredicted RBP7.98□□□□□ -1.13
TM9SF3-202ENST00000443638 ERCC5P28715 1186 aaPredicted RBP7.97□□□□□ -1.13
TM9SF3-202ENST00000443638 WEE1P30291 646 aa7.97□□□□□ -1.13
TM9SF3-202ENST00000443638 GTF2IP78347 998 aa7.97□□□□□ -1.13
TM9SF3-202ENST00000443638 RAD51AP2Q09MP3 1159 aa7.97□□□□□ -1.13
TM9SF3-202ENST00000443638 EAPPQ56P03 285 aaPredicted RBP7.97□□□□□ -1.13
TM9SF3-202ENST00000443638 ADAM32Q8TC27 787 aa7.97□□□□□ -1.13
TM9SF3-202ENST00000443638 SCAMP3O14828 347 aaKnown RBP7.96□□□□□ -1.14
TM9SF3-202ENST00000443638 PSEN2P49810 448 aa7.96□□□□□ -1.14
TM9SF3-202ENST00000443638 CCDC102BQ68D86 513 aa7.96□□□□□ -1.14
TM9SF3-202ENST00000443638 LAPTM4BQ86VI4 370 aa7.96□□□□□ -1.14
TM9SF3-202ENST00000443638 ARMC2Q8NEN0 867 aa7.96□□□□□ -1.14
TM9SF3-202ENST00000443638 KCNH8Q96L42 1107 aa7.96□□□□□ -1.14
TM9SF3-202ENST00000443638 PCDHGA11Q9Y5H2 935 aa7.96□□□□□ -1.14
TM9SF3-202ENST00000443638 SFI1A8K8P3 1242 aa7.95□□□□□ -1.14
TM9SF3-202ENST00000443638 P4HBP07237 508 aaKnown RBP7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 196.4 ms