RNA–Protein interactions for RNA: ENST00000443247.1

AC003001.1-201, humanhuman

TSL 5 BASIC

Gene AC003001.1, Length 1,135 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC003001.1-201ENST00000443247 NNTQ13423 1086 aa9.41□□□□□ -0.9
AC003001.1-201ENST00000443247 VASH1Q7L8A9 365 aaPredicted RBP9.41□□□□□ -0.9
AC003001.1-201ENST00000443247 MAP4K5Q9Y4K4 846 aa9.41□□□□□ -0.9
AC003001.1-201ENST00000443247 FSHRP23945 695 aa9.4□□□□□ -0.9
AC003001.1-201ENST00000443247 NR1H3Q13133 447 aa9.4□□□□□ -0.9
AC003001.1-201ENST00000443247 LCE2CQ5TA81 110 aa9.4□□□□□ -0.9
AC003001.1-201ENST00000443247 CAPN5O15484 640 aaPredicted RBP9.39□□□□□ -0.91
AC003001.1-201ENST00000443247 DZIP3Q86Y13 1208 aaKnown RBP9.39□□□□□ -0.91
AC003001.1-201ENST00000443247 TRIM47Q96LD4 638 aa9.39□□□□□ -0.91
AC003001.1-201ENST00000443247 COG6Q9Y2V7 657 aa9.39□□□□□ -0.91
AC003001.1-201ENST00000443247 UBTFP17480 764 aaKnown RBP9.38□□□□□ -0.91
AC003001.1-201ENST00000443247 GRM5P41594 1212 aa9.38□□□□□ -0.91
AC003001.1-201ENST00000443247 NR5A1Q13285 461 aa9.38□□□□□ -0.91
AC003001.1-201ENST00000443247 IRF5Q13568 498 aa9.38□□□□□ -0.91
AC003001.1-201ENST00000443247 POM121Q96HA1 1249 aa9.38□□□□□ -0.91
AC003001.1-201ENST00000443247 CDV3Q9UKY7 258 aaKnown RBP9.38□□□□□ -0.91
AC003001.1-201ENST00000443247 PCDHB9Q9Y5E1 797 aa9.38□□□□□ -0.91
AC003001.1-201ENST00000443247 NR3C2P08235 984 aa9.37□□□□□ -0.91
AC003001.1-201ENST00000443247 NBPF20Q3BBV1 942 aa9.36□□□□□ -0.91
AC003001.1-201ENST00000443247 KCTD15Q96SI1 283 aaPredicted RBP9.36□□□□□ -0.91
AC003001.1-201ENST00000443247 SENP2Q9HC62 589 aa9.36□□□□□ -0.91
AC003001.1-201ENST00000443247 WIPF1O43516 503 aa9.35□□□□□ -0.91
AC003001.1-201ENST00000443247 RAD21O60216 631 aa9.35□□□□□ -0.91
AC003001.1-201ENST00000443247 WDR4P57081 412 aaKnown RBP9.35□□□□□ -0.91
AC003001.1-201ENST00000443247 KLF16Q9BXK1 252 aaPredicted RBP9.35□□□□□ -0.91
AC003001.1-201ENST00000443247 TIMP2P16035 220 aa9.34□□□□□ -0.91
AC003001.1-201ENST00000443247 ZNF330Q9Y3S2 320 aaPredicted RBP9.34□□□□□ -0.91
AC003001.1-201ENST00000443247 TERTO14746 1132 aaKnown RBP9.33□□□□□ -0.92
AC003001.1-201ENST00000443247 RAB15P59190 212 aa9.33□□□□□ -0.92
AC003001.1-201ENST00000443247 VAC14Q08AM6 782 aa9.33□□□□□ -0.92
AC003001.1-201ENST00000443247 INTS6LQ5JSJ4 861 aaKnown RBP9.33□□□□□ -0.92
AC003001.1-201ENST00000443247 CCDC116Q8IYX3 515 aa9.33□□□□□ -0.92
AC003001.1-201ENST00000443247 KIFC2Q96AC6 838 aa9.33□□□□□ -0.92
AC003001.1-201ENST00000443247 ZIC2O95409 532 aaPredicted RBP9.31□□□□□ -0.92
AC003001.1-201ENST00000443247 BMP1P13497 986 aa9.31□□□□□ -0.92
AC003001.1-201ENST00000443247 WASHC4Q2M389 1173 aa9.31□□□□□ -0.92
AC003001.1-201ENST00000443247 TRIM46Q7Z4K8 759 aa9.31□□□□□ -0.92
AC003001.1-201ENST00000443247 ITPKCQ96DU7 683 aa9.31□□□□□ -0.92
AC003001.1-201ENST00000443247 PPP1R26Q5T8A7 1209 aaPredicted RBP9.3□□□□□ -0.92
AC003001.1-201ENST00000443247 ZNF592Q92610 1267 aa9.3□□□□□ -0.92
AC003001.1-201ENST00000443247 CLUAP1Q96AJ1 413 aa9.3□□□□□ -0.92
AC003001.1-201ENST00000443247 ZFAND3Q9H8U3 227 aa9.3□□□□□ -0.92
AC003001.1-201ENST00000443247 ESPNB1AK53 854 aa9.29□□□□□ -0.92
AC003001.1-201ENST00000443247 GIGYF1O75420 1035 aaPredicted RBP9.29□□□□□ -0.92
AC003001.1-201ENST00000443247 MCCD1P59942 119 aaPredicted RBP9.29□□□□□ -0.92
AC003001.1-201ENST00000443247 EIF4G2P78344 907 aaKnown RBP eCLIP9.29□□□□□ -0.92
AC003001.1-201ENST00000443247 WWC1Q8IX03 1113 aa9.29□□□□□ -0.92
AC003001.1-201ENST00000443247 EMILIN1Q9Y6C2 1016 aa9.29□□□□□ -0.92
AC003001.1-201ENST00000443247 DHX9Q08211 1270 aaKnown RBP9.28□□□□□ -0.92
AC003001.1-201ENST00000443247 MRPL14Q6P1L8 145 aaKnown RBP9.28□□□□□ -0.92
AC003001.1-201ENST00000443247 STK17AQ9UEE5 414 aa9.28□□□□□ -0.92
AC003001.1-201ENST00000443247 SCARF1Q14162 830 aa9.27□□□□□ -0.93
AC003001.1-201ENST00000443247 SEPT12Q8IYM1 358 aa9.27□□□□□ -0.93
AC003001.1-201ENST00000443247 PGPEP1Q9NXJ5 209 aa9.27□□□□□ -0.93
AC003001.1-201ENST00000443247 ERVH48-1M5A8F1 160 aa9.26□□□□□ -0.93
AC003001.1-201ENST00000443247 INSM1Q01101 510 aaPredicted RBP9.26□□□□□ -0.93
AC003001.1-201ENST00000443247 ZFP42Q96MM3 310 aa9.26□□□□□ -0.93
AC003001.1-201ENST00000443247 TMPRSS4Q9NRS4 437 aa9.26□□□□□ -0.93
AC003001.1-201ENST00000443247 GTF3C3Q9Y5Q9 886 aa9.26□□□□□ -0.93
AC003001.1-201ENST00000443247 PROSER2Q86WR7 435 aaPredicted RBP9.25□□□□□ -0.93
AC003001.1-201ENST00000443247 CEP126Q9P2H0 1117 aa9.24□□□□□ -0.93
AC003001.1-201ENST00000443247 CBLBQ13191 982 aa9.23□□□□□ -0.93
AC003001.1-201ENST00000443247 SEMA3FQ13275 785 aa9.23□□□□□ -0.93
AC003001.1-201ENST00000443247 RNF20Q5VTR2 975 aa9.23□□□□□ -0.93
AC003001.1-201ENST00000443247 MEIOBQ8N635 442 aa9.23□□□□□ -0.93
AC003001.1-201ENST00000443247 ZNF784Q8NCA9 323 aaPredicted RBP9.23□□□□□ -0.93
AC003001.1-201ENST00000443247 PURBQ96QR8 312 aaKnown RBP9.23□□□□□ -0.93
AC003001.1-201ENST00000443247 POM121CA8CG34 1229 aa9.22□□□□□ -0.93
AC003001.1-201ENST00000443247 UPP2O95045 317 aa9.22□□□□□ -0.93
AC003001.1-201ENST00000443247 SOX11P35716 441 aa9.22□□□□□ -0.93
AC003001.1-201ENST00000443247 CYLDQ9NQC7 956 aa9.21□□□□□ -0.94
AC003001.1-201ENST00000443247 NXF1Q9UBU9 619 aaKnown RBP9.21□□□□□ -0.94
AC003001.1-201ENST00000443247 PCDHB11Q9Y5F2 797 aa9.21□□□□□ -0.94
AC003001.1-201ENST00000443247 A6NJR5 290 aa9.2□□□□□ -0.94
AC003001.1-201ENST00000443247 SLFNL1Q499Z3 407 aa9.2□□□□□ -0.94
AC003001.1-201ENST00000443247 LINC00528Q8N1L1 170 aa9.2□□□□□ -0.94
AC003001.1-201ENST00000443247 FNBP4Q8N3X1 1017 aaPredicted RBP9.2□□□□□ -0.94
AC003001.1-201ENST00000443247 TSEN34Q9BSV6 310 aaKnown RBP9.2□□□□□ -0.94
AC003001.1-201ENST00000443247 LILRA1O75019 489 aa9.19□□□□□ -0.94
AC003001.1-201ENST00000443247 C6orf118Q5T5N4 469 aa9.19□□□□□ -0.94
AC003001.1-201ENST00000443247 Q6ZVU0 165 aa9.19□□□□□ -0.94
AC003001.1-201ENST00000443247 CCDC125Q86Z20 511 aa9.19□□□□□ -0.94
AC003001.1-201ENST00000443247 RNF135Q8IUD6 432 aa9.19□□□□□ -0.94
AC003001.1-201ENST00000443247 CCDC85AQ96PX6 553 aaPredicted RBP9.19□□□□□ -0.94
AC003001.1-201ENST00000443247 BMP2P12643 396 aa9.18□□□□□ -0.94
AC003001.1-201ENST00000443247 ALG2Q9H553 416 aa9.18□□□□□ -0.94
AC003001.1-201ENST00000443247 LORP23490 312 aaPredicted RBP9.17□□□□□ -0.94
AC003001.1-201ENST00000443247 ADD1P35611 737 aaKnown RBP9.17□□□□□ -0.94
AC003001.1-201ENST00000443247 SCTRP47872 440 aa9.17□□□□□ -0.94
AC003001.1-201ENST00000443247 PHTF2Q8N3S3 785 aa9.17□□□□□ -0.94
AC003001.1-201ENST00000443247 ADAMTS19Q8TE59 1207 aa9.17□□□□□ -0.94
AC003001.1-201ENST00000443247 SLC16A10Q8TF71 515 aa9.17□□□□□ -0.94
AC003001.1-201ENST00000443247 AGBL1Q96MI9 1066 aa9.17□□□□□ -0.94
AC003001.1-201ENST00000443247 ADH1AP07327 375 aa9.16□□□□□ -0.94
AC003001.1-201ENST00000443247 GMPRP36959 345 aa9.16□□□□□ -0.94
AC003001.1-201ENST00000443247 VEGFBP49765 207 aa9.16□□□□□ -0.94
AC003001.1-201ENST00000443247 ERVK-9P63128 1117 aa9.16□□□□□ -0.94
AC003001.1-201ENST00000443247 CC2D2BQ6DHV5 1058 aa9.16□□□□□ -0.94
AC003001.1-201ENST00000443247 NPAS3Q8IXF0 933 aa9.16□□□□□ -0.94
AC003001.1-201ENST00000443247 TRIM52Q96A61 297 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 143 ms