RNA–Protein interactions for RNA: ENST00000442679.5

USP1-203, Transcript of ubiquitin specific peptidase 1, humanhuman

TSL 2

Gene USP1, Length 502 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-203ENST00000442679 AMER1Q5JTC6 1135 aaPredicted RBP16.86■□□□□ 0.29
USP1-203ENST00000442679 LARP1Q6PKG0 1096 aaKnown RBP16.86■□□□□ 0.29
USP1-203ENST00000442679 MAP3K19Q56UN5 1328 aa16.86■□□□□ 0.29
USP1-203ENST00000442679 NSD2O96028 1365 aa16.86■□□□□ 0.29
USP1-203ENST00000442679 LMO7Q8WWI1 1683 aa16.85■□□□□ 0.29
USP1-203ENST00000442679 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.85■□□□□ 0.29
USP1-203ENST00000442679 TNNT2P45379 298 aaPredicted RBP16.85■□□□□ 0.29
USP1-203ENST00000442679 AMPHP49418 695 aa16.85■□□□□ 0.29
USP1-203ENST00000442679 MORC1Q86VD1 984 aa16.85■□□□□ 0.29
USP1-203ENST00000442679 IP6K1Q92551 441 aa16.85■□□□□ 0.29
USP1-203ENST00000442679 SPATA31A5Q5VU36 1347 aa16.85■□□□□ 0.29
USP1-203ENST00000442679 SPATA31A7Q8IWB4 1347 aa16.85■□□□□ 0.29
USP1-203ENST00000442679 COL5A2P05997 1499 aaPredicted RBP16.84■□□□□ 0.29
USP1-203ENST00000442679 NRAPQ86VF7 1730 aa16.84■□□□□ 0.29
USP1-203ENST00000442679 CSB-PGBD3P0DP91 1061 aa16.83■□□□□ 0.28
USP1-203ENST00000442679 ADRA2BP18089 450 aa16.83■□□□□ 0.28
USP1-203ENST00000442679 COL18A1P39060 1754 aa16.82■□□□□ 0.28
USP1-203ENST00000442679 SPATA31A1Q5TZJ5 1347 aa16.82■□□□□ 0.28
USP1-203ENST00000442679 HOXC9P31274 260 aa16.82■□□□□ 0.28
USP1-203ENST00000442679 CNGB1Q14028 1251 aaPredicted RBP16.82■□□□□ 0.28
USP1-203ENST00000442679 CC2D1BQ5T0F9 858 aaKnown RBP16.82■□□□□ 0.28
USP1-203ENST00000442679 TOM1L2Q6ZVM7 507 aa16.82■□□□□ 0.28
USP1-203ENST00000442679 USP35Q9P2H5 1018 aa16.82■□□□□ 0.28
USP1-203ENST00000442679 WDR17Q8IZU2 1322 aa16.81■□□□□ 0.28
USP1-203ENST00000442679 FAM98CQ17RN3 349 aaKnown RBP16.81■□□□□ 0.28
USP1-203ENST00000442679 ANKRD24Q8TF21 1146 aa16.81■□□□□ 0.28
USP1-203ENST00000442679 EMILIN1Q9Y6C2 1016 aa16.81■□□□□ 0.28
USP1-203ENST00000442679 GLI3P10071 1580 aa16.81■□□□□ 0.28
USP1-203ENST00000442679 ABCC6O95255 1503 aa16.8■□□□□ 0.28
USP1-203ENST00000442679 CDK12Q9NYV4 1490 aaPredicted RBP16.8■□□□□ 0.28
USP1-203ENST00000442679 PPM1GO15355 546 aaPredicted RBP16.8■□□□□ 0.28
USP1-203ENST00000442679 ONECUT3O60422 494 aaPredicted RBP16.8■□□□□ 0.28
USP1-203ENST00000442679 DDX10Q13206 875 aaKnown RBP16.8■□□□□ 0.28
USP1-203ENST00000442679 LTV1Q96GA3 475 aaPredicted RBP16.8■□□□□ 0.28
USP1-203ENST00000442679 POLKQ9UBT6 870 aa16.8■□□□□ 0.28
USP1-203ENST00000442679 BLMP54132 1417 aaPredicted RBP16.79■□□□□ 0.28
USP1-203ENST00000442679 CRB1P82279 1406 aa16.79■□□□□ 0.28
USP1-203ENST00000442679 SEPT12Q8IYM1 358 aa16.79■□□□□ 0.28
USP1-203ENST00000442679 TCP11L2Q8N4U5 519 aa16.79■□□□□ 0.28
USP1-203ENST00000442679 LTN1O94822 1766 aa16.79■□□□□ 0.28
USP1-203ENST00000442679 RGS12O14924 1447 aa16.79■□□□□ 0.28
USP1-203ENST00000442679 RTL1A6NKG5 1358 aa16.78■□□□□ 0.28
USP1-203ENST00000442679 NPC1L1Q9UHC9 1359 aa16.78■□□□□ 0.28
USP1-203ENST00000442679 ERBB3P21860 1342 aa16.78■□□□□ 0.28
USP1-203ENST00000442679 A0A0G2JS52 829 aa16.78■□□□□ 0.28
USP1-203ENST00000442679 ZNF316A6NFI3 1004 aaPredicted RBP16.78■□□□□ 0.28
USP1-203ENST00000442679 MYT1Q01538 1121 aa16.78■□□□□ 0.28
USP1-203ENST00000442679 HSP90AB2PQ58FF8 381 aa16.78■□□□□ 0.28
USP1-203ENST00000442679 CARD10Q9BWT7 1032 aa16.78■□□□□ 0.28
USP1-203ENST00000442679 NLRP2Q9NX02 1062 aa16.78■□□□□ 0.28
USP1-203ENST00000442679 THRAP3Q9Y2W1 955 aaKnown RBP16.78■□□□□ 0.28
USP1-203ENST00000442679 FLT4P35916 1363 aa16.77■□□□□ 0.28
USP1-203ENST00000442679 KIF24Q5T7B8 1368 aa16.77■□□□□ 0.28
USP1-203ENST00000442679 ANKRD26Q9UPS8 1709 aa16.76■□□□□ 0.27
USP1-203ENST00000442679 BARGINQ6ZT62 677 aa16.76■□□□□ 0.27
USP1-203ENST00000442679 INSRP06213 1382 aa16.76■□□□□ 0.27
USP1-203ENST00000442679 RGPD5Q99666 1765 aa16.74■□□□□ 0.27
USP1-203ENST00000442679 PEAK1Q9H792 1746 aa16.73■□□□□ 0.27
USP1-203ENST00000442679 SMG6Q86US8 1419 aaKnown RBP16.72■□□□□ 0.27
USP1-203ENST00000442679 POTEDQ86YR6 584 aa16.72■□□□□ 0.27
USP1-203ENST00000442679 MTHFSP49914 203 aa16.7■□□□□ 0.26
USP1-203ENST00000442679 NBPF6Q5VWK0 638 aa16.7■□□□□ 0.26
USP1-203ENST00000442679 KRT27Q7Z3Y8 459 aa16.7■□□□□ 0.26
USP1-203ENST00000442679 NBPF4Q96M43 638 aa16.7■□□□□ 0.26
USP1-203ENST00000442679 CDCA7Q9BWT1 371 aaPredicted RBP16.7■□□□□ 0.26
USP1-203ENST00000442679 MAP2P11137 1827 aaKnown RBP16.69■□□□□ 0.26
USP1-203ENST00000442679 SOCS7O14512 581 aa16.69■□□□□ 0.26
USP1-203ENST00000442679 PDE3BQ13370 1112 aa16.68■□□□□ 0.26
USP1-203ENST00000442679 EIF4A2Q14240 407 aaKnown RBP16.68■□□□□ 0.26
USP1-203ENST00000442679 USHBP1Q8N6Y0 703 aa16.68■□□□□ 0.26
USP1-203ENST00000442679 THSD7AQ9UPZ6 1657 aa16.67■□□□□ 0.26
USP1-203ENST00000442679 IL2RBP14784 551 aa16.67■□□□□ 0.26
USP1-203ENST00000442679 DDB1Q16531 1140 aa16.67■□□□□ 0.26
USP1-203ENST00000442679 EXOC5O00471 708 aa16.66■□□□□ 0.26
USP1-203ENST00000442679 PPP2R1AP30153 589 aa16.66■□□□□ 0.26
USP1-203ENST00000442679 EYA1Q99502 592 aa16.66■□□□□ 0.26
USP1-203ENST00000442679 DISP2A7MBM2 1401 aa16.65■□□□□ 0.26
USP1-203ENST00000442679 FAM182BQ5T319 152 aa16.64■□□□□ 0.25
USP1-203ENST00000442679 FAM208AQ9UK61 1670 aaKnown RBP16.64■□□□□ 0.25
USP1-203ENST00000442679 IL13P35225 146 aa16.63■□□□□ 0.25
USP1-203ENST00000442679 RALBP1Q15311 655 aa16.63■□□□□ 0.25
USP1-203ENST00000442679 RAPGEF4Q8WZA2 1011 aa16.63■□□□□ 0.25
USP1-203ENST00000442679 PARD3Q8TEW0 1356 aa16.63■□□□□ 0.25
USP1-203ENST00000442679 BRWD3Q6RI45 1802 aa16.62■□□□□ 0.25
USP1-203ENST00000442679 TATP17735 454 aaPredicted RBP16.62■□□□□ 0.25
USP1-203ENST00000442679 DIAPH1O60610 1272 aaKnown RBP16.61■□□□□ 0.25
USP1-203ENST00000442679 UPF1Q92900 1129 aaKnown RBP eCLIP16.61■□□□□ 0.25
USP1-203ENST00000442679 CFAP53Q96M91 514 aa16.61■□□□□ 0.25
USP1-203ENST00000442679 PARP4Q9UKK3 1724 aaKnown RBP16.6■□□□□ 0.25
USP1-203ENST00000442679 RGPD2P0DJD1 1756 aa16.6■□□□□ 0.25
USP1-203ENST00000442679 FAM196AQ6ZSG2 479 aa16.6■□□□□ 0.25
USP1-203ENST00000442679 MARCH10Q8NA82 808 aaPredicted RBP16.6■□□□□ 0.25
USP1-203ENST00000442679 IGSF1Q8N6C5 1336 aa16.6■□□□□ 0.25
USP1-203ENST00000442679 ZCRB1Q8TBF4 217 aaKnown RBP16.59■□□□□ 0.25
USP1-203ENST00000442679 DDX54Q8TDD1 881 aaKnown RBP16.58■□□□□ 0.24
USP1-203ENST00000442679 NCAPD2Q15021 1401 aa16.58■□□□□ 0.24
USP1-203ENST00000442679 TNS2Q63HR2 1409 aa16.58■□□□□ 0.24
USP1-203ENST00000442679 MEGF6O75095 1541 aa16.58■□□□□ 0.24
USP1-203ENST00000442679 LRRC37A3O60309 1634 aa16.58■□□□□ 0.24
USP1-203ENST00000442679 WNK3Q9BYP7 1800 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms