RNA–Protein interactions for RNA: ENST00000441350.2

VPS13B-204, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 1,626 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-204ENST00000441350 KIAA0232Q92628 1395 aa28.16■■■□□ 2.1
VPS13B-204ENST00000441350 COL18A1P39060 1754 aa28.16■■■□□ 2.1
VPS13B-204ENST00000441350 EIF4A2Q14240 407 aaKnown RBP28.16■■■□□ 2.1
VPS13B-204ENST00000441350 ABCC6O95255 1503 aa28.16■■■□□ 2.1
VPS13B-204ENST00000441350 HAP1P54257 671 aaPredicted RBP28.15■■■□□ 2.1
VPS13B-204ENST00000441350 ZBTB7CA1YPR0 619 aa28.14■■■□□ 2.1
VPS13B-204ENST00000441350 HSPA1LP34931 641 aa28.14■■■□□ 2.09
VPS13B-204ENST00000441350 BLMP54132 1417 aaPredicted RBP28.13■■■□□ 2.09
VPS13B-204ENST00000441350 JCADQ9P266 1359 aa28.13■■■□□ 2.09
VPS13B-204ENST00000441350 AXIN2Q9Y2T1 843 aa28.11■■■□□ 2.09
VPS13B-204ENST00000441350 U2SURPO15042 1029 aaKnown RBP28.1■■■□□ 2.09
VPS13B-204ENST00000441350 RGPD1P0DJD0 1748 aa28.1■■■□□ 2.09
VPS13B-204ENST00000441350 RGPD5Q99666 1765 aa28.1■■■□□ 2.09
VPS13B-204ENST00000441350 U2AF1L5P0DN76 240 aaPredicted RBP28.1■■■□□ 2.09
VPS13B-204ENST00000441350 U2AF1Q01081 240 aaKnown RBP eCLIP28.1■■■□□ 2.09
VPS13B-204ENST00000441350 PRDM11Q9NQV5 511 aa28.1■■■□□ 2.09
VPS13B-204ENST00000441350 CHRNA2Q15822 529 aa28.09■■■□□ 2.09
VPS13B-204ENST00000441350 LMO7Q8WWI1 1683 aa28.08■■■□□ 2.09
VPS13B-204ENST00000441350 FAM83GA6ND36 823 aa28.05■■■□□ 2.08
VPS13B-204ENST00000441350 YTHDC1Q96MU7 727 aaKnown RBP28.05■■■□□ 2.08
VPS13B-204ENST00000441350 LTV1Q96GA3 475 aaPredicted RBP28.04■■■□□ 2.08
VPS13B-204ENST00000441350 CAMTA1Q9Y6Y1 1673 aa28.03■■■□□ 2.08
VPS13B-204ENST00000441350 ANKRD24Q8TF21 1146 aa28.03■■■□□ 2.08
VPS13B-204ENST00000441350 FCHSD2O94868 740 aa28.03■■■□□ 2.08
VPS13B-204ENST00000441350 EYA1Q99502 592 aa28.03■■■□□ 2.08
VPS13B-204ENST00000441350 ERBB3P21860 1342 aa28.03■■■□□ 2.08
VPS13B-204ENST00000441350 IGSF1Q8N6C5 1336 aa28.03■■■□□ 2.08
VPS13B-204ENST00000441350 COL14A1Q05707 1796 aaKnown RBP28.02■■■□□ 2.08
VPS13B-204ENST00000441350 SPATA31A6Q5VVP1 1343 aa28.01■■■□□ 2.07
VPS13B-204ENST00000441350 RSPH6AQ9H0K4 717 aa28.01■■■□□ 2.07
VPS13B-204ENST00000441350 NUTM2BA6NNL0 878 aaPredicted RBP28■■■□□ 2.07
VPS13B-204ENST00000441350 NUTM2EB1AL46 878 aaPredicted RBP28■■■□□ 2.07
VPS13B-204ENST00000441350 HMOX1P09601 288 aa28■■■□□ 2.07
VPS13B-204ENST00000441350 NUTM2AQ8IVF1 878 aaPredicted RBP28■■■□□ 2.07
VPS13B-204ENST00000441350 CCDC146Q8IYE0 955 aa28■■■□□ 2.07
VPS13B-204ENST00000441350 RGPD2P0DJD1 1756 aa27.99■■■□□ 2.07
VPS13B-204ENST00000441350 KDRP35968 1356 aa27.99■■■□□ 2.07
VPS13B-204ENST00000441350 PLEKHF1Q96S99 279 aa27.99■■■□□ 2.07
VPS13B-204ENST00000441350 HNRNPUQ00839 825 aaKnown RBP eCLIP27.98■■■□□ 2.07
VPS13B-204ENST00000441350 SULT6B1Q6IMI4 303 aa27.98■■■□□ 2.07
VPS13B-204ENST00000441350 AEBP1Q8IUX7 1158 aa27.98■■■□□ 2.07
VPS13B-204ENST00000441350 RUNDC1Q96C34 613 aa27.98■■■□□ 2.07
VPS13B-204ENST00000441350 ADAMTS2O95450 1211 aa27.97■■■□□ 2.07
VPS13B-204ENST00000441350 NBPF6Q5VWK0 638 aa27.97■■■□□ 2.07
VPS13B-204ENST00000441350 NBPF4Q96M43 638 aa27.97■■■□□ 2.07
VPS13B-204ENST00000441350 PNNQ9H307 717 aaKnown RBP27.97■■■□□ 2.07
VPS13B-204ENST00000441350 COL5A2P05997 1499 aaPredicted RBP27.97■■■□□ 2.07
VPS13B-204ENST00000441350 FAM208AQ9UK61 1670 aaKnown RBP27.97■■■□□ 2.07
VPS13B-204ENST00000441350 NCAPD2Q15021 1401 aa27.96■■■□□ 2.07
VPS13B-204ENST00000441350 PRKAR2BP31323 418 aa27.95■■■□□ 2.06
VPS13B-204ENST00000441350 FBXO41Q8TF61 875 aa27.93■■■□□ 2.06
VPS13B-204ENST00000441350 LRP6O75581 1613 aa27.92■■■□□ 2.06
VPS13B-204ENST00000441350 BTG4Q9NY30 223 aa27.92■■■□□ 2.06
VPS13B-204ENST00000441350 PLCH1Q4KWH8 1693 aa27.92■■■□□ 2.06
VPS13B-204ENST00000441350 WDR17Q8IZU2 1322 aa27.92■■■□□ 2.06
VPS13B-204ENST00000441350 APAF1O14727 1248 aa27.91■■■□□ 2.06
VPS13B-204ENST00000441350 CSB-PGBD3P0DP91 1061 aa27.9■■■□□ 2.06
VPS13B-204ENST00000441350 USHBP1Q8N6Y0 703 aa27.9■■■□□ 2.06
VPS13B-204ENST00000441350 TCP11L2Q8N4U5 519 aa27.89■■■□□ 2.06
VPS13B-204ENST00000441350 NLRP2Q9NX02 1062 aa27.89■■■□□ 2.06
VPS13B-204ENST00000441350 PHACTR3Q96KR7 559 aa27.89■■■□□ 2.05
VPS13B-204ENST00000441350 MAPK8IP3Q9UPT6 1336 aa27.88■■■□□ 2.05
VPS13B-204ENST00000441350 SENP3-EIF4A1A0A087X0R7 540 aa27.88■■■□□ 2.05
VPS13B-204ENST00000441350 EVA1CP58658 441 aa27.88■■■□□ 2.05
VPS13B-204ENST00000441350 NWD2Q9ULI1 1742 aa27.88■■■□□ 2.05
VPS13B-204ENST00000441350 SLIT2O94813 1529 aa27.87■■■□□ 2.05
VPS13B-204ENST00000441350 ZBED9Q6R2W3 1325 aa27.87■■■□□ 2.05
VPS13B-204ENST00000441350 NRAPQ86VF7 1730 aa27.87■■■□□ 2.05
VPS13B-204ENST00000441350 STRN4Q9NRL3 753 aa27.86■■■□□ 2.05
VPS13B-204ENST00000441350 LARP1Q6PKG0 1096 aaKnown RBP27.85■■■□□ 2.05
VPS13B-204ENST00000441350 NEFMP07197 916 aa27.85■■■□□ 2.05
VPS13B-204ENST00000441350 NGEFQ8N5V2 710 aa27.85■■■□□ 2.05
VPS13B-204ENST00000441350 TOM1L2Q6ZVM7 507 aa27.84■■■□□ 2.05
VPS13B-204ENST00000441350 CARD10Q9BWT7 1032 aa27.84■■■□□ 2.05
VPS13B-204ENST00000441350 TMPOP42166 694 aaKnown RBP27.83■■■□□ 2.05
VPS13B-204ENST00000441350 NCBP3Q53F19 620 aaKnown RBP27.83■■■□□ 2.05
VPS13B-204ENST00000441350 CRB1P82279 1406 aa27.83■■■□□ 2.05
VPS13B-204ENST00000441350 C8orf37Q96NL8 207 aa27.82■■■□□ 2.04
VPS13B-204ENST00000441350 FNBP4Q8N3X1 1017 aaPredicted RBP27.81■■■□□ 2.04
VPS13B-204ENST00000441350 NGLY1Q96IV0 654 aa27.81■■■□□ 2.04
VPS13B-204ENST00000441350 RRP7AQ9Y3A4 280 aaKnown RBP27.81■■■□□ 2.04
VPS13B-204ENST00000441350 SALL2Q9Y467 1007 aaPredicted RBP27.81■■■□□ 2.04
VPS13B-204ENST00000441350 NFE2L2Q16236 605 aa27.8■■■□□ 2.04
VPS13B-204ENST00000441350 PHF23Q9BUL5 403 aaPredicted RBP27.78■■■□□ 2.04
VPS13B-204ENST00000441350 BCL9LQ86UU0 1499 aa27.78■■■□□ 2.04
VPS13B-204ENST00000441350 PLEKHG2Q9H7P9 1386 aa27.77■■■□□ 2.04
VPS13B-204ENST00000441350 NEUROD2Q15784 382 aa27.77■■■□□ 2.04
VPS13B-204ENST00000441350 CCDC27Q2M243 656 aa27.77■■■□□ 2.04
VPS13B-204ENST00000441350 ZNF521Q96K83 1311 aa27.76■■■□□ 2.03
VPS13B-204ENST00000441350 MTHFSDQ2M296 383 aaKnown RBP27.76■■■□□ 2.03
VPS13B-204ENST00000441350 MEX3CQ5U5Q3 659 aaKnown RBP27.76■■■□□ 2.03
VPS13B-204ENST00000441350 UNC5CLQ8IV45 518 aa27.76■■■□□ 2.03
VPS13B-204ENST00000441350 MEGF6O75095 1541 aa27.75■■■□□ 2.03
VPS13B-204ENST00000441350 RIPK4P57078 832 aa27.75■■■□□ 2.03
VPS13B-204ENST00000441350 RAPGEF4Q8WZA2 1011 aa27.75■■■□□ 2.03
VPS13B-204ENST00000441350 DLG5Q8TDM6 1919 aa27.75■■■□□ 2.03
VPS13B-204ENST00000441350 WWC1Q8IX03 1113 aa27.74■■■□□ 2.03
VPS13B-204ENST00000441350 GAS2L2Q8NHY3 880 aa27.74■■■□□ 2.03
VPS13B-204ENST00000441350 TRIM35Q9UPQ4 493 aa27.74■■■□□ 2.03
VPS13B-204ENST00000441350 TNKS1BP1Q9C0C2 1729 aaKnown RBP27.73■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms