RNA–Protein interactions for RNA: ENST00000440421.2

LTBR-202, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 729 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-202ENST00000440421 TCP11L2Q8N4U5 519 aa19.14■□□□□ 0.65
LTBR-202ENST00000440421 POLR3GLQ9BT43 218 aa19.14■□□□□ 0.65
LTBR-202ENST00000440421 RGPD5Q99666 1765 aa19.14■□□□□ 0.65
LTBR-202ENST00000440421 FAM182BQ5T319 152 aa19.13■□□□□ 0.65
LTBR-202ENST00000440421 OVOS2A0A0J9YW53 1432 aa19.13■□□□□ 0.65
LTBR-202ENST00000440421 CRB1P82279 1406 aa19.13■□□□□ 0.65
LTBR-202ENST00000440421 OVOS2Q6IE36 1432 aa19.13■□□□□ 0.65
LTBR-202ENST00000440421 MYOM1P52179 1685 aa19.12■□□□□ 0.65
LTBR-202ENST00000440421 BARGINQ6ZT62 677 aa19.12■□□□□ 0.65
LTBR-202ENST00000440421 TOM1L2Q6ZVM7 507 aa19.12■□□□□ 0.65
LTBR-202ENST00000440421 CSB-PGBD3P0DP91 1061 aa19.11■□□□□ 0.65
LTBR-202ENST00000440421 COG3Q96JB2 828 aa19.11■□□□□ 0.65
LTBR-202ENST00000440421 LTN1O94822 1766 aa19.11■□□□□ 0.65
LTBR-202ENST00000440421 WDR17Q8IZU2 1322 aa19.1■□□□□ 0.65
LTBR-202ENST00000440421 CCDC125Q86Z20 511 aa19.1■□□□□ 0.65
LTBR-202ENST00000440421 THRAP3Q9Y2W1 955 aaKnown RBP19.09■□□□□ 0.65
LTBR-202ENST00000440421 BLMP54132 1417 aaPredicted RBP19.08■□□□□ 0.65
LTBR-202ENST00000440421 GGNBP2Q9H3C7 697 aa19.08■□□□□ 0.64
LTBR-202ENST00000440421 EP400Q96L91 3159 aa19.07■□□□□ 0.64
LTBR-202ENST00000440421 FYB1O15117 783 aa19.07■□□□□ 0.64
LTBR-202ENST00000440421 ABCC6O95255 1503 aa19.06■□□□□ 0.64
LTBR-202ENST00000440421 FBLN1P23142 703 aa19.06■□□□□ 0.64
LTBR-202ENST00000440421 PDE3BQ13370 1112 aa19.06■□□□□ 0.64
LTBR-202ENST00000440421 SF3B2Q13435 895 aaKnown RBP19.06■□□□□ 0.64
LTBR-202ENST00000440421 CARD14Q9BXL6 1004 aa19.06■□□□□ 0.64
LTBR-202ENST00000440421 NSD3Q9BZ95 1437 aa19.05■□□□□ 0.64
LTBR-202ENST00000440421 KIF20BQ96Q89 1820 aa19.04■□□□□ 0.64
LTBR-202ENST00000440421 DEFB132Q7Z7B7 95 aa19.04■□□□□ 0.64
LTBR-202ENST00000440421 PARP4Q9UKK3 1724 aaKnown RBP19.03■□□□□ 0.64
LTBR-202ENST00000440421 CARD10Q9BWT7 1032 aa19.03■□□□□ 0.64
LTBR-202ENST00000440421 ERBB3P21860 1342 aa19.02■□□□□ 0.64
LTBR-202ENST00000440421 MAP3K19Q56UN5 1328 aa19.02■□□□□ 0.64
LTBR-202ENST00000440421 ANKRD24Q8TF21 1146 aa19.02■□□□□ 0.64
LTBR-202ENST00000440421 NLRP2Q9NX02 1062 aa19.02■□□□□ 0.64
LTBR-202ENST00000440421 WNK3Q9BYP7 1800 aa19.02■□□□□ 0.63
LTBR-202ENST00000440421 C11orf95C9JLR9 678 aaPredicted RBP19.01■□□□□ 0.63
LTBR-202ENST00000440421 AMPHP49418 695 aa19.01■□□□□ 0.63
LTBR-202ENST00000440421 FAM196AQ6ZSG2 479 aa19.01■□□□□ 0.63
LTBR-202ENST00000440421 IP6K1Q92551 441 aa19.01■□□□□ 0.63
LTBR-202ENST00000440421 LTV1Q96GA3 475 aaPredicted RBP19.01■□□□□ 0.63
LTBR-202ENST00000440421 LRRC37A3O60309 1634 aa19■□□□□ 0.63
LTBR-202ENST00000440421 RRS1Q15050 365 aaKnown RBP19■□□□□ 0.63
LTBR-202ENST00000440421 DDB1Q16531 1140 aa19■□□□□ 0.63
LTBR-202ENST00000440421 CCDC7Q96M83 1385 aa18.99■□□□□ 0.63
LTBR-202ENST00000440421 TRIM37O94972 964 aa18.99■□□□□ 0.63
LTBR-202ENST00000440421 RGPD1P0DJD0 1748 aa18.99■□□□□ 0.63
LTBR-202ENST00000440421 HOXC9P31274 260 aa18.98■□□□□ 0.63
LTBR-202ENST00000440421 CDCA7Q9BWT1 371 aaPredicted RBP18.98■□□□□ 0.63
LTBR-202ENST00000440421 BAG6P46379 1132 aa18.97■□□□□ 0.63
LTBR-202ENST00000440421 PANK3Q9H999 370 aa18.97■□□□□ 0.63
LTBR-202ENST00000440421 DISP2A7MBM2 1401 aa18.97■□□□□ 0.63
LTBR-202ENST00000440421 CGNL1Q0VF96 1302 aa18.97■□□□□ 0.63
LTBR-202ENST00000440421 TNS1Q9HBL0 1735 aaKnown RBP18.96■□□□□ 0.63
LTBR-202ENST00000440421 EN1Q05925 392 aaPredicted RBP18.94■□□□□ 0.62
LTBR-202ENST00000440421 RTL1A6NKG5 1358 aa18.93■□□□□ 0.62
LTBR-202ENST00000440421 OVOS2A0A0G2JMS6 1433 aa18.93■□□□□ 0.62
LTBR-202ENST00000440421 EXOC5O00471 708 aa18.93■□□□□ 0.62
LTBR-202ENST00000440421 KIF7Q2M1P5 1343 aa18.93■□□□□ 0.62
LTBR-202ENST00000440421 FAM208AQ9UK61 1670 aaKnown RBP18.92■□□□□ 0.62
LTBR-202ENST00000440421 PEAK1Q9H792 1746 aa18.92■□□□□ 0.62
LTBR-202ENST00000440421 APBA3O96018 575 aa18.92■□□□□ 0.62
LTBR-202ENST00000440421 IL2RBP14784 551 aa18.92■□□□□ 0.62
LTBR-202ENST00000440421 MARCH10Q8NA82 808 aaPredicted RBP18.92■□□□□ 0.62
LTBR-202ENST00000440421 EMILIN1Q9Y6C2 1016 aa18.91■□□□□ 0.62
LTBR-202ENST00000440421 RGPD2P0DJD1 1756 aa18.91■□□□□ 0.62
LTBR-202ENST00000440421 TNS2Q63HR2 1409 aa18.91■□□□□ 0.62
LTBR-202ENST00000440421 PPM1GO15355 546 aaPredicted RBP18.9■□□□□ 0.62
LTBR-202ENST00000440421 HSP90AB2PQ58FF8 381 aa18.9■□□□□ 0.62
LTBR-202ENST00000440421 TNNT2P45379 298 aaPredicted RBP18.89■□□□□ 0.61
LTBR-202ENST00000440421 FLT4P35916 1363 aa18.89■□□□□ 0.61
LTBR-202ENST00000440421 ANKRD26Q9UPS8 1709 aa18.88■□□□□ 0.61
LTBR-202ENST00000440421 EZH2Q15910 746 aaKnown RBP18.88■□□□□ 0.61
LTBR-202ENST00000440421 SMG6Q86US8 1419 aaKnown RBP18.88■□□□□ 0.61
LTBR-202ENST00000440421 INSRP06213 1382 aa18.87■□□□□ 0.61
LTBR-202ENST00000440421 NBPF6Q5VWK0 638 aa18.87■□□□□ 0.61
LTBR-202ENST00000440421 SBF2Q86WG5 1849 aa18.87■□□□□ 0.61
LTBR-202ENST00000440421 USHBP1Q8N6Y0 703 aa18.87■□□□□ 0.61
LTBR-202ENST00000440421 NBPF4Q96M43 638 aa18.87■□□□□ 0.61
LTBR-202ENST00000440421 KIF24Q5T7B8 1368 aa18.86■□□□□ 0.61
LTBR-202ENST00000440421 MAP2P11137 1827 aaKnown RBP18.86■□□□□ 0.61
LTBR-202ENST00000440421 PTF1AQ7RTS3 328 aa18.85■□□□□ 0.61
LTBR-202ENST00000440421 CAMKK2Q96RR4 588 aa18.85■□□□□ 0.61
LTBR-202ENST00000440421 KNSTRNQ9Y448 316 aa18.85■□□□□ 0.61
LTBR-202ENST00000440421 POLKQ9UBT6 870 aa18.84■□□□□ 0.61
LTBR-202ENST00000440421 DDX54Q8TDD1 881 aaKnown RBP18.83■□□□□ 0.6
LTBR-202ENST00000440421 BCL11BQ9C0K0 894 aaPredicted RBP18.83■□□□□ 0.6
LTBR-202ENST00000440421 BCL9O00512 1426 aa18.83■□□□□ 0.6
LTBR-202ENST00000440421 NSD2O96028 1365 aa18.82■□□□□ 0.6
LTBR-202ENST00000440421 MORC1Q86VD1 984 aa18.82■□□□□ 0.6
LTBR-202ENST00000440421 ACSBG1Q96GR2 724 aa18.82■□□□□ 0.6
LTBR-202ENST00000440421 MEGF6O75095 1541 aa18.82■□□□□ 0.6
LTBR-202ENST00000440421 WASHC2AQ641Q2 1341 aa18.81■□□□□ 0.6
LTBR-202ENST00000440421 PSDA5PKW4 1024 aaPredicted RBP18.81■□□□□ 0.6
LTBR-202ENST00000440421 PARD3Q8TEW0 1356 aa18.81■□□□□ 0.6
LTBR-202ENST00000440421 KCNQ2O43526 872 aa18.8■□□□□ 0.6
LTBR-202ENST00000440421 RAPGEF4Q8WZA2 1011 aa18.8■□□□□ 0.6
LTBR-202ENST00000440421 ZCRB1Q8TBF4 217 aaKnown RBP18.79■□□□□ 0.6
LTBR-202ENST00000440421 RREB1Q92766 1687 aa18.79■□□□□ 0.6
LTBR-202ENST00000440421 AMER1Q5JTC6 1135 aaPredicted RBP18.78■□□□□ 0.6
LTBR-202ENST00000440421 NHSQ6T4R5 1651 aa18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms