RNA–Protein interactions for RNA: ENST00000440284.6

ACSM3-202, Transcript of acyl-CoA synthetase medium chain family member 3, humanhuman

TSL 1 (best) BASIC

Gene ACSM3, Length 1,517 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACSM3-202ENST00000440284 RIMS1Q86UR5 1692 aaKnown RBP13.15□□□□□ -0.3
ACSM3-202ENST00000440284 ANP32AP39687 249 aaKnown RBP13.15□□□□□ -0.3
ACSM3-202ENST00000440284 GNAI1P63096 354 aa13.15□□□□□ -0.3
ACSM3-202ENST00000440284 EXOSC9Q06265 439 aaKnown RBP13.15□□□□□ -0.3
ACSM3-202ENST00000440284 ALDH1L2Q3SY69 923 aa13.15□□□□□ -0.3
ACSM3-202ENST00000440284 NGDNQ8NEJ9 315 aaKnown RBP13.15□□□□□ -0.3
ACSM3-202ENST00000440284 SSH2Q76I76 1423 aa13.14□□□□□ -0.31
ACSM3-202ENST00000440284 IPO8O15397 1037 aaKnown RBP13.14□□□□□ -0.31
ACSM3-202ENST00000440284 PDE4AP27815 886 aa13.14□□□□□ -0.31
ACSM3-202ENST00000440284 ERICH6Q7L0X2 663 aa13.13□□□□□ -0.31
ACSM3-202ENST00000440284 SMC4Q9NTJ3 1288 aa13.13□□□□□ -0.31
ACSM3-202ENST00000440284 COG6Q9Y2V7 657 aa13.13□□□□□ -0.31
ACSM3-202ENST00000440284 ZNF142P52746 1687 aaPredicted RBP13.13□□□□□ -0.31
ACSM3-202ENST00000440284 HMOX1P09601 288 aa13.13□□□□□ -0.31
ACSM3-202ENST00000440284 FBLN1P23142 703 aa13.13□□□□□ -0.31
ACSM3-202ENST00000440284 RRS1Q15050 365 aaKnown RBP13.13□□□□□ -0.31
ACSM3-202ENST00000440284 BACH2Q9BYV9 841 aa13.13□□□□□ -0.31
ACSM3-202ENST00000440284 IFT57Q9NWB7 429 aa13.13□□□□□ -0.31
ACSM3-202ENST00000440284 KIF16BQ96L93 1317 aa13.12□□□□□ -0.31
ACSM3-202ENST00000440284 NUTM2FA1L443 756 aa13.12□□□□□ -0.31
ACSM3-202ENST00000440284 FTSJ3Q8IY81 847 aaKnown RBP13.12□□□□□ -0.31
ACSM3-202ENST00000440284 DZIP1LQ8IYY4 767 aaKnown RBP13.12□□□□□ -0.31
ACSM3-202ENST00000440284 PANK1Q8TE04 598 aa13.12□□□□□ -0.31
ACSM3-202ENST00000440284 TSR2Q969E8 191 aaKnown RBP13.12□□□□□ -0.31
ACSM3-202ENST00000440284 ADAMTSL3P82987 1691 aa13.12□□□□□ -0.31
ACSM3-202ENST00000440284 SETD1BQ9UPS6 1966 aaKnown RBP13.12□□□□□ -0.31
ACSM3-202ENST00000440284 KCNA6P17658 529 aa13.11□□□□□ -0.31
ACSM3-202ENST00000440284 HAP1P54257 671 aaPredicted RBP13.11□□□□□ -0.31
ACSM3-202ENST00000440284 BRPF1P55201 1214 aaPredicted RBP13.11□□□□□ -0.31
ACSM3-202ENST00000440284 ANP32EQ9BTT0 268 aa13.11□□□□□ -0.31
ACSM3-202ENST00000440284 CHMP4BQ9H444 224 aaKnown RBP13.11□□□□□ -0.31
ACSM3-202ENST00000440284 KIF24Q5T7B8 1368 aa13.1□□□□□ -0.31
ACSM3-202ENST00000440284 EIF4A2Q14240 407 aaKnown RBP13.1□□□□□ -0.31
ACSM3-202ENST00000440284 MVPQ14764 893 aaKnown RBP13.1□□□□□ -0.31
ACSM3-202ENST00000440284 PHACTR3Q96KR7 559 aa13.1□□□□□ -0.31
ACSM3-202ENST00000440284 RWDD1Q9H446 243 aaPredicted RBP13.1□□□□□ -0.31
ACSM3-202ENST00000440284 NALCNQ8IZF0 1738 aa13.1□□□□□ -0.31
ACSM3-202ENST00000440284 DDX19BQ9UMR2 479 aa13.09□□□□□ -0.31
ACSM3-202ENST00000440284 SBNO1A3KN83 1393 aa13.09□□□□□ -0.31
ACSM3-202ENST00000440284 ATF7IPQ6VMQ6 1270 aa13.08□□□□□ -0.31
ACSM3-202ENST00000440284 SSH1Q8WYL5 1049 aa13.08□□□□□ -0.31
ACSM3-202ENST00000440284 BCL2L13Q9BXK5 485 aa13.08□□□□□ -0.31
ACSM3-202ENST00000440284 FMN2Q9NZ56 1722 aa13.08□□□□□ -0.32
ACSM3-202ENST00000440284 ARHGEF10O15013 1369 aa13.08□□□□□ -0.32
ACSM3-202ENST00000440284 FLT4P35916 1363 aa13.08□□□□□ -0.32
ACSM3-202ENST00000440284 ZNF853P0CG23 659 aa13.08□□□□□ -0.32
ACSM3-202ENST00000440284 ATXN8OSP0DMR3 200 aa13.08□□□□□ -0.32
ACSM3-202ENST00000440284 CFAP44Q96MT7 982 aa13.08□□□□□ -0.32
ACSM3-202ENST00000440284 CHD2O14647 1828 aaKnown RBP13.07□□□□□ -0.32
ACSM3-202ENST00000440284 FAM161AQ3B820 660 aa13.07□□□□□ -0.32
ACSM3-202ENST00000440284 SULT6B1Q6IMI4 303 aa13.07□□□□□ -0.32
ACSM3-202ENST00000440284 ARHGAP45Q92619 1136 aa13.07□□□□□ -0.32
ACSM3-202ENST00000440284 IPO9Q96P70 1041 aaKnown RBP13.07□□□□□ -0.32
ACSM3-202ENST00000440284 LAS1LQ9Y4W2 734 aaKnown RBP13.07□□□□□ -0.32
ACSM3-202ENST00000440284 RLBP1P12271 317 aa13.06□□□□□ -0.32
ACSM3-202ENST00000440284 AMPHP49418 695 aa13.06□□□□□ -0.32
ACSM3-202ENST00000440284 NOB1Q9ULX3 412 aaKnown RBP13.06□□□□□ -0.32
ACSM3-202ENST00000440284 IGHDP01880 384 aa13.05□□□□□ -0.32
ACSM3-202ENST00000440284 NLRP6P59044 892 aa13.05□□□□□ -0.32
ACSM3-202ENST00000440284 PHF8Q9UPP1 1060 aa13.05□□□□□ -0.32
ACSM3-202ENST00000440284 MAP3K19Q56UN5 1328 aa13.05□□□□□ -0.32
ACSM3-202ENST00000440284 NPHP4O75161 1426 aaPredicted RBP13.05□□□□□ -0.32
ACSM3-202ENST00000440284 VAMP4O75379 141 aa13.04□□□□□ -0.32
ACSM3-202ENST00000440284 TRIM27P14373 513 aa13.04□□□□□ -0.32
ACSM3-202ENST00000440284 HSP90AB2PQ58FF8 381 aa13.04□□□□□ -0.32
ACSM3-202ENST00000440284 USP54Q70EL1 1684 aa13.04□□□□□ -0.32
ACSM3-202ENST00000440284 DDRGK1Q96HY6 314 aa13.03□□□□□ -0.32
ACSM3-202ENST00000440284 NOP58Q9Y2X3 529 aaKnown RBP13.03□□□□□ -0.32
ACSM3-202ENST00000440284 ADGRL3Q9HAR2 1447 aa13.03□□□□□ -0.32
ACSM3-202ENST00000440284 MYCNP04198 464 aaPredicted RBP13.03□□□□□ -0.32
ACSM3-202ENST00000440284 GAS2L2Q8NHY3 880 aa13.03□□□□□ -0.32
ACSM3-202ENST00000440284 MBIPQ9NS73 344 aa13.03□□□□□ -0.32
ACSM3-202ENST00000440284 ZBTB47Q9UFB7 747 aaPredicted RBP13.03□□□□□ -0.32
ACSM3-202ENST00000440284 TNNQ9UQP3 1299 aa13.03□□□□□ -0.32
ACSM3-202ENST00000440284 RGPD1P0DJD0 1748 aa13.02□□□□□ -0.33
ACSM3-202ENST00000440284 RGPD8O14715 1765 aaPredicted RBP13.02□□□□□ -0.33
ACSM3-202ENST00000440284 HTATSF1O43719 755 aaKnown RBP13.02□□□□□ -0.33
ACSM3-202ENST00000440284 RGS3P49796 1198 aa13.02□□□□□ -0.33
ACSM3-202ENST00000440284 HDAC1Q13547 482 aaPredicted RBP13.02□□□□□ -0.33
ACSM3-202ENST00000440284 TWISTNBQ3B726 338 aaPredicted RBP13.02□□□□□ -0.33
ACSM3-202ENST00000440284 ITPRIPQ8IWB1 547 aa13.02□□□□□ -0.33
ACSM3-202ENST00000440284 MRPL50Q8N5N7 158 aaKnown RBP13.02□□□□□ -0.33
ACSM3-202ENST00000440284 ABTB2Q8N961 1025 aa13.02□□□□□ -0.33
ACSM3-202ENST00000440284 API5Q9BZZ5 524 aaKnown RBP13.02□□□□□ -0.33
ACSM3-202ENST00000440284 PCDHB15Q9Y5E8 787 aa13.02□□□□□ -0.33
ACSM3-202ENST00000440284 RTL1A6NKG5 1358 aa13.02□□□□□ -0.33
ACSM3-202ENST00000440284 PEAK1Q9H792 1746 aa13.01□□□□□ -0.33
ACSM3-202ENST00000440284 IGSF1Q8N6C5 1336 aa13.01□□□□□ -0.33
ACSM3-202ENST00000440284 PIK3C2AO00443 1686 aa13.01□□□□□ -0.33
ACSM3-202ENST00000440284 KDRP35968 1356 aa13□□□□□ -0.33
ACSM3-202ENST00000440284 KIAA0232Q92628 1395 aa13□□□□□ -0.33
ACSM3-202ENST00000440284 SOX12O15370 315 aa13□□□□□ -0.33
ACSM3-202ENST00000440284 AEBP1Q8IUX7 1158 aa13□□□□□ -0.33
ACSM3-202ENST00000440284 RTF1Q92541 710 aaKnown RBP13□□□□□ -0.33
ACSM3-202ENST00000440284 DNAJC5Q9H3Z4 198 aa13□□□□□ -0.33
ACSM3-202ENST00000440284 DLG5Q8TDM6 1919 aa13□□□□□ -0.33
ACSM3-202ENST00000440284 PAK3O75914 559 aaPredicted RBP12.99□□□□□ -0.33
ACSM3-202ENST00000440284 TMEM57Q8N5G2 664 aa12.99□□□□□ -0.33
ACSM3-202ENST00000440284 KCNH5Q8NCM2 988 aa12.99□□□□□ -0.33
ACSM3-202ENST00000440284 THUMPD2Q9BTF0 503 aaKnown RBP12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms