RNA–Protein interactions for RNA: ENST00000439475.1

MCF2L-216, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 453 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-216ENST00000439475 SF3B2Q13435 895 aaKnown RBP14.49□□□□□ -0.09
MCF2L-216ENST00000439475 LMO7Q8WWI1 1683 aa14.47□□□□□ -0.09
MCF2L-216ENST00000439475 COL5A2P05997 1499 aaPredicted RBP14.47□□□□□ -0.09
MCF2L-216ENST00000439475 PDE3BQ13370 1112 aa14.47□□□□□ -0.09
MCF2L-216ENST00000439475 AXIN2Q9Y2T1 843 aa14.47□□□□□ -0.09
MCF2L-216ENST00000439475 WDR17Q8IZU2 1322 aa14.46□□□□□ -0.09
MCF2L-216ENST00000439475 CRB1P82279 1406 aa14.46□□□□□ -0.09
MCF2L-216ENST00000439475 BRWD3Q6RI45 1802 aa14.45□□□□□ -0.1
MCF2L-216ENST00000439475 FYB1O15117 783 aa14.45□□□□□ -0.1
MCF2L-216ENST00000439475 CDCA7Q9BWT1 371 aaPredicted RBP14.45□□□□□ -0.1
MCF2L-216ENST00000439475 GGNBP2Q9H3C7 697 aa14.45□□□□□ -0.1
MCF2L-216ENST00000439475 OVOS2A0A0J9YW53 1432 aa14.44□□□□□ -0.1
MCF2L-216ENST00000439475 OVOS2Q6IE36 1432 aa14.44□□□□□ -0.1
MCF2L-216ENST00000439475 AMPHP49418 695 aa14.44□□□□□ -0.1
MCF2L-216ENST00000439475 CARD10Q9BWT7 1032 aa14.44□□□□□ -0.1
MCF2L-216ENST00000439475 USP54Q70EL1 1684 aa14.44□□□□□ -0.1
MCF2L-216ENST00000439475 COL18A1P39060 1754 aa14.44□□□□□ -0.1
MCF2L-216ENST00000439475 NFAT5O94916 1531 aa14.43□□□□□ -0.1
MCF2L-216ENST00000439475 C11orf95C9JLR9 678 aaPredicted RBP14.43□□□□□ -0.1
MCF2L-216ENST00000439475 FAM196AQ6ZSG2 479 aa14.43□□□□□ -0.1
MCF2L-216ENST00000439475 IP6K1Q92551 441 aa14.43□□□□□ -0.1
MCF2L-216ENST00000439475 BLMP54132 1417 aaPredicted RBP14.42□□□□□ -0.1
MCF2L-216ENST00000439475 ABCC6O95255 1503 aa14.42□□□□□ -0.1
MCF2L-216ENST00000439475 CARD14Q9BXL6 1004 aa14.42□□□□□ -0.1
MCF2L-216ENST00000439475 CCDC7Q96M83 1385 aa14.42□□□□□ -0.1
MCF2L-216ENST00000439475 CGNL1Q0VF96 1302 aa14.41□□□□□ -0.1
MCF2L-216ENST00000439475 DDB1Q16531 1140 aa14.41□□□□□ -0.1
MCF2L-216ENST00000439475 ANKRD24Q8TF21 1146 aa14.41□□□□□ -0.1
MCF2L-216ENST00000439475 NLRP2Q9NX02 1062 aa14.41□□□□□ -0.1
MCF2L-216ENST00000439475 RGPD5Q99666 1765 aa14.41□□□□□ -0.1
MCF2L-216ENST00000439475 NSD3Q9BZ95 1437 aa14.41□□□□□ -0.1
MCF2L-216ENST00000439475 BAG6P46379 1132 aa14.4□□□□□ -0.1
MCF2L-216ENST00000439475 ERBB3P21860 1342 aa14.4□□□□□ -0.1
MCF2L-216ENST00000439475 LTN1O94822 1766 aa14.39□□□□□ -0.11
MCF2L-216ENST00000439475 THSD7AQ9UPZ6 1657 aa14.39□□□□□ -0.11
MCF2L-216ENST00000439475 EXOC5O00471 708 aa14.39□□□□□ -0.11
MCF2L-216ENST00000439475 PANK3Q9H999 370 aa14.39□□□□□ -0.11
MCF2L-216ENST00000439475 MAP3K19Q56UN5 1328 aa14.39□□□□□ -0.11
MCF2L-216ENST00000439475 HOXC9P31274 260 aa14.38□□□□□ -0.11
MCF2L-216ENST00000439475 FAM182BQ5T319 152 aa14.38□□□□□ -0.11
MCF2L-216ENST00000439475 LTV1Q96GA3 475 aaPredicted RBP14.38□□□□□ -0.11
MCF2L-216ENST00000439475 RRS1Q15050 365 aaKnown RBP14.37□□□□□ -0.11
MCF2L-216ENST00000439475 KIF20BQ96Q89 1820 aa14.36□□□□□ -0.11
MCF2L-216ENST00000439475 MYOM1P52179 1685 aa14.36□□□□□ -0.11
MCF2L-216ENST00000439475 FBLN1P23142 703 aa14.36□□□□□ -0.11
MCF2L-216ENST00000439475 KNSTRNQ9Y448 316 aa14.36□□□□□ -0.11
MCF2L-216ENST00000439475 IL2RBP14784 551 aa14.35□□□□□ -0.11
MCF2L-216ENST00000439475 RTL1A6NKG5 1358 aa14.34□□□□□ -0.11
MCF2L-216ENST00000439475 KIF24Q5T7B8 1368 aa14.34□□□□□ -0.11
MCF2L-216ENST00000439475 TRIM37O94972 964 aa14.34□□□□□ -0.11
MCF2L-216ENST00000439475 DEFB132Q7Z7B7 95 aa14.34□□□□□ -0.11
MCF2L-216ENST00000439475 PARP4Q9UKK3 1724 aaKnown RBP14.34□□□□□ -0.11
MCF2L-216ENST00000439475 SMG6Q86US8 1419 aaKnown RBP14.33□□□□□ -0.11
MCF2L-216ENST00000439475 KIF7Q2M1P5 1343 aa14.33□□□□□ -0.12
MCF2L-216ENST00000439475 PPM1GO15355 546 aaPredicted RBP14.32□□□□□ -0.12
MCF2L-216ENST00000439475 APBA3O96018 575 aa14.32□□□□□ -0.12
MCF2L-216ENST00000439475 NSD2O96028 1365 aa14.32□□□□□ -0.12
MCF2L-216ENST00000439475 FLT4P35916 1363 aa14.32□□□□□ -0.12
MCF2L-216ENST00000439475 OVOS2A0A0G2JMS6 1433 aa14.32□□□□□ -0.12
MCF2L-216ENST00000439475 MORC1Q86VD1 984 aa14.31□□□□□ -0.12
MCF2L-216ENST00000439475 RGPD1P0DJD0 1748 aa14.31□□□□□ -0.12
MCF2L-216ENST00000439475 INSRP06213 1382 aa14.31□□□□□ -0.12
MCF2L-216ENST00000439475 EN1Q05925 392 aaPredicted RBP14.3□□□□□ -0.12
MCF2L-216ENST00000439475 HSP90AB2PQ58FF8 381 aa14.3□□□□□ -0.12
MCF2L-216ENST00000439475 DISP2A7MBM2 1401 aa14.3□□□□□ -0.12
MCF2L-216ENST00000439475 FAM208AQ9UK61 1670 aaKnown RBP14.3□□□□□ -0.12
MCF2L-216ENST00000439475 TNNT2P45379 298 aaPredicted RBP14.29□□□□□ -0.12
MCF2L-216ENST00000439475 MARCH10Q8NA82 808 aaPredicted RBP14.29□□□□□ -0.12
MCF2L-216ENST00000439475 RAPGEF4Q8WZA2 1011 aa14.29□□□□□ -0.12
MCF2L-216ENST00000439475 EMILIN1Q9Y6C2 1016 aa14.29□□□□□ -0.12
MCF2L-216ENST00000439475 MAP2P11137 1827 aaKnown RBP14.28□□□□□ -0.12
MCF2L-216ENST00000439475 WASHC2AQ641Q2 1341 aa14.28□□□□□ -0.12
MCF2L-216ENST00000439475 WNK3Q9BYP7 1800 aa14.28□□□□□ -0.12
MCF2L-216ENST00000439475 POLKQ9UBT6 870 aa14.28□□□□□ -0.12
MCF2L-216ENST00000439475 TATP17735 454 aaPredicted RBP14.27□□□□□ -0.13
MCF2L-216ENST00000439475 NBPF6Q5VWK0 638 aa14.27□□□□□ -0.13
MCF2L-216ENST00000439475 NBPF4Q96M43 638 aa14.27□□□□□ -0.13
MCF2L-216ENST00000439475 BCL11BQ9C0K0 894 aaPredicted RBP14.27□□□□□ -0.13
MCF2L-216ENST00000439475 LRRC37A3O60309 1634 aa14.26□□□□□ -0.13
MCF2L-216ENST00000439475 BCL9O00512 1426 aa14.26□□□□□ -0.13
MCF2L-216ENST00000439475 TNS2Q63HR2 1409 aa14.26□□□□□ -0.13
MCF2L-216ENST00000439475 PARD3Q8TEW0 1356 aa14.26□□□□□ -0.13
MCF2L-216ENST00000439475 EZH2Q15910 746 aaKnown RBP14.26□□□□□ -0.13
MCF2L-216ENST00000439475 ZCRB1Q8TBF4 217 aaKnown RBP14.26□□□□□ -0.13
MCF2L-216ENST00000439475 DDX54Q8TDD1 881 aaKnown RBP14.26□□□□□ -0.13
MCF2L-216ENST00000439475 KAT6BQ8WYB5 2073 aa14.26□□□□□ -0.13
MCF2L-216ENST00000439475 ANKRD26Q9UPS8 1709 aa14.25□□□□□ -0.13
MCF2L-216ENST00000439475 PLSCR1O15162 318 aa14.25□□□□□ -0.13
MCF2L-216ENST00000439475 NBPF14Q5TI25 921 aa14.24□□□□□ -0.13
MCF2L-216ENST00000439475 CAMKK2Q96RR4 588 aa14.24□□□□□ -0.13
MCF2L-216ENST00000439475 PER1O15534 1290 aaPredicted RBP14.23□□□□□ -0.13
MCF2L-216ENST00000439475 AMER1Q5JTC6 1135 aaPredicted RBP14.23□□□□□ -0.13
MCF2L-216ENST00000439475 USHBP1Q8N6Y0 703 aa14.23□□□□□ -0.13
MCF2L-216ENST00000439475 ACSBG1Q96GR2 724 aa14.22□□□□□ -0.13
MCF2L-216ENST00000439475 SBF2Q86WG5 1849 aa14.22□□□□□ -0.13
MCF2L-216ENST00000439475 RGPD2P0DJD1 1756 aa14.22□□□□□ -0.13
MCF2L-216ENST00000439475 PEAK1Q9H792 1746 aa14.21□□□□□ -0.13
MCF2L-216ENST00000439475 TNS1Q9HBL0 1735 aaKnown RBP14.21□□□□□ -0.13
MCF2L-216ENST00000439475 CC2D1BQ5T0F9 858 aaKnown RBP14.21□□□□□ -0.13
MCF2L-216ENST00000439475 EIF4A2Q14240 407 aaKnown RBP14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms