RNA–Protein interactions for RNA: ENST00000438801.1

HMGB1P18-201, Transcript of high mobility group box 1 pseudogene 18, humanhuman

BASIC

Gene HMGB1P18, Length 619 nt, Biotype processed pseudogene.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P18-201ENST00000438801 H3BM21 787 aa7.21□□□□□ -1.26
HMGB1P18-201ENST00000438801 UPP2O95045 317 aa7.21□□□□□ -1.26
HMGB1P18-201ENST00000438801 BMP2P12643 396 aa7.21□□□□□ -1.26
HMGB1P18-201ENST00000438801 ZBTB33Q86T24 672 aa7.21□□□□□ -1.26
HMGB1P18-201ENST00000438801 SLC10A4Q96EP9 437 aa7.21□□□□□ -1.26
HMGB1P18-201ENST00000438801 MAN1A2O60476 641 aa7.2□□□□□ -1.26
HMGB1P18-201ENST00000438801 PTK2Q05397 1052 aa7.2□□□□□ -1.26
HMGB1P18-201ENST00000438801 EPS8L1Q8TE68 723 aa7.2□□□□□ -1.26
HMGB1P18-201ENST00000438801 IRF7Q92985 503 aa7.2□□□□□ -1.26
HMGB1P18-201ENST00000438801 CDV3Q9UKY7 258 aaKnown RBP7.2□□□□□ -1.26
HMGB1P18-201ENST00000438801 USP17L8P0C7I0 530 aa7.19□□□□□ -1.26
HMGB1P18-201ENST00000438801 RFC5P40937 340 aa7.19□□□□□ -1.26
HMGB1P18-201ENST00000438801 PPP1R26Q5T8A7 1209 aaPredicted RBP7.19□□□□□ -1.26
HMGB1P18-201ENST00000438801 KCTD15Q96SI1 283 aaPredicted RBP7.19□□□□□ -1.26
HMGB1P18-201ENST00000438801 GOPCQ9HD26 462 aa7.19□□□□□ -1.26
HMGB1P18-201ENST00000438801 HMX1Q9NP08 348 aaPredicted RBP7.19□□□□□ -1.26
HMGB1P18-201ENST00000438801 GPSM3Q9Y4H4 160 aa7.19□□□□□ -1.26
HMGB1P18-201ENST00000438801 GMPRP36959 345 aa7.18□□□□□ -1.26
HMGB1P18-201ENST00000438801 PNMA1Q8ND90 353 aa7.18□□□□□ -1.26
HMGB1P18-201ENST00000438801 PCMTD1Q96MG8 357 aaPredicted RBP7.18□□□□□ -1.26
HMGB1P18-201ENST00000438801 OCSTAMPQ9BR26 566 aa7.18□□□□□ -1.26
HMGB1P18-201ENST00000438801 TSEN34Q9BSV6 310 aaKnown RBP7.18□□□□□ -1.26
HMGB1P18-201ENST00000438801 PGPEP1Q9NXJ5 209 aa7.18□□□□□ -1.26
HMGB1P18-201ENST00000438801 STK17AQ9UEE5 414 aa7.18□□□□□ -1.26
HMGB1P18-201ENST00000438801 NEUROD2Q15784 382 aa7.17□□□□□ -1.26
HMGB1P18-201ENST00000438801 ADAM32Q8TC27 787 aa7.17□□□□□ -1.26
HMGB1P18-201ENST00000438801 SOS2Q07890 1332 aaPredicted RBP7.17□□□□□ -1.26
HMGB1P18-201ENST00000438801 ERBB4Q15303 1308 aa7.17□□□□□ -1.26
HMGB1P18-201ENST00000438801 DHX9Q08211 1270 aaKnown RBP7.16□□□□□ -1.26
HMGB1P18-201ENST00000438801 IL27Q8NEV9 243 aa7.16□□□□□ -1.26
HMGB1P18-201ENST00000438801 CBLBQ13191 982 aa7.15□□□□□ -1.26
HMGB1P18-201ENST00000438801 TMEM259Q4ZIN3 620 aa7.15□□□□□ -1.26
HMGB1P18-201ENST00000438801 INTS6LQ5JSJ4 861 aaKnown RBP7.15□□□□□ -1.26
HMGB1P18-201ENST00000438801 Q6ZVU0 165 aa7.15□□□□□ -1.26
HMGB1P18-201ENST00000438801 NBPF20Q3BBV1 942 aa7.14□□□□□ -1.27
HMGB1P18-201ENST00000438801 DNMT3LQ9UJW3 386 aa7.14□□□□□ -1.27
HMGB1P18-201ENST00000438801 TTLL8A6PVC2 850 aa7.13□□□□□ -1.27
HMGB1P18-201ENST00000438801 DZIP3Q86Y13 1208 aaKnown RBP7.13□□□□□ -1.27
HMGB1P18-201ENST00000438801 TRIM34Q9BYJ4 488 aa7.13□□□□□ -1.27
HMGB1P18-201ENST00000438801 SPINT1O43278 529 aa7.12□□□□□ -1.27
HMGB1P18-201ENST00000438801 PPFIA3O75145 1194 aa7.12□□□□□ -1.27
HMGB1P18-201ENST00000438801 VSIG8P0DPA2 414 aa7.12□□□□□ -1.27
HMGB1P18-201ENST00000438801 BRPF1P55201 1214 aaPredicted RBP7.11□□□□□ -1.27
HMGB1P18-201ENST00000438801 RAB15P59190 212 aa7.11□□□□□ -1.27
HMGB1P18-201ENST00000438801 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.11□□□□□ -1.27
HMGB1P18-201ENST00000438801 ZSCAN1Q8NBB4 408 aa7.11□□□□□ -1.27
HMGB1P18-201ENST00000438801 TMPRSS4Q9NRS4 437 aa7.11□□□□□ -1.27
HMGB1P18-201ENST00000438801 FIGNL2A6NMB9 653 aa7.1□□□□□ -1.27
HMGB1P18-201ENST00000438801 LORP23490 312 aaPredicted RBP7.1□□□□□ -1.27
HMGB1P18-201ENST00000438801 AGBL1Q96MI9 1066 aa7.1□□□□□ -1.27
HMGB1P18-201ENST00000438801 FAM181BA6NEQ2 426 aa7.09□□□□□ -1.27
HMGB1P18-201ENST00000438801 ZNF784Q8NCA9 323 aaPredicted RBP7.09□□□□□ -1.27
HMGB1P18-201ENST00000438801 GJD4Q96KN9 370 aaPredicted RBP7.09□□□□□ -1.27
HMGB1P18-201ENST00000438801 ZBBXA8MT70 800 aa7.08□□□□□ -1.28
HMGB1P18-201ENST00000438801 ESPNB1AK53 854 aa7.08□□□□□ -1.28
HMGB1P18-201ENST00000438801 ERVH48-1M5A8F1 160 aa7.08□□□□□ -1.28
HMGB1P18-201ENST00000438801 RELBQ01201 579 aa7.08□□□□□ -1.28
HMGB1P18-201ENST00000438801 PTSQ03393 145 aa7.08□□□□□ -1.28
HMGB1P18-201ENST00000438801 CTSOP43234 321 aaPredicted RBP7.07□□□□□ -1.28
HMGB1P18-201ENST00000438801 SEPT12Q8IYM1 358 aa7.07□□□□□ -1.28
HMGB1P18-201ENST00000438801 INSM2Q96T92 566 aaPredicted RBP7.07□□□□□ -1.28
HMGB1P18-201ENST00000438801 LILRA1O75019 489 aa7.06□□□□□ -1.28
HMGB1P18-201ENST00000438801 ADH1AP07327 375 aa7.06□□□□□ -1.28
HMGB1P18-201ENST00000438801 ADD1P35611 737 aaKnown RBP7.06□□□□□ -1.28
HMGB1P18-201ENST00000438801 ZNF395Q9H8N7 513 aaPredicted RBP7.06□□□□□ -1.28
HMGB1P18-201ENST00000438801 POLMQ9NP87 494 aaPredicted RBP7.06□□□□□ -1.28
HMGB1P18-201ENST00000438801 FBXO45P0C2W1 286 aa7.05□□□□□ -1.28
HMGB1P18-201ENST00000438801 PCDHB9Q9Y5E1 797 aa7.05□□□□□ -1.28
HMGB1P18-201ENST00000438801 CCDC155Q8N6L0 562 aa7.04□□□□□ -1.28
HMGB1P18-201ENST00000438801 BANK1Q8NDB2 785 aa7.04□□□□□ -1.28
HMGB1P18-201ENST00000438801 TRIM52Q96A61 297 aa7.04□□□□□ -1.28
HMGB1P18-201ENST00000438801 SLC35F4A4IF30 521 aa7.03□□□□□ -1.28
HMGB1P18-201ENST00000438801 GIGYF1O75420 1035 aaPredicted RBP7.03□□□□□ -1.28
HMGB1P18-201ENST00000438801 PTGIRP43119 386 aa7.03□□□□□ -1.28
HMGB1P18-201ENST00000438801 TPRNQ4KMQ1 711 aa7.03□□□□□ -1.28
HMGB1P18-201ENST00000438801 KDF1Q8NAX2 398 aaPredicted RBP7.03□□□□□ -1.28
HMGB1P18-201ENST00000438801 RNF217Q8TC41 542 aa7.03□□□□□ -1.28
HMGB1P18-201ENST00000438801 CYLDQ9NQC7 956 aa7.03□□□□□ -1.28
HMGB1P18-201ENST00000438801 GPR161Q8N6U8 529 aaKnown RBP7.02□□□□□ -1.29
HMGB1P18-201ENST00000438801 SOCS7O14512 581 aa7.01□□□□□ -1.29
HMGB1P18-201ENST00000438801 MCCD1P59942 119 aaPredicted RBP7.01□□□□□ -1.29
HMGB1P18-201ENST00000438801 NR1H3Q13133 447 aa7.01□□□□□ -1.29
HMGB1P18-201ENST00000438801 FOXD4L5Q5VV16 416 aaPredicted RBP7.01□□□□□ -1.29
HMGB1P18-201ENST00000438801 MTMR14Q8NCE2 650 aa7.01□□□□□ -1.29
HMGB1P18-201ENST00000438801 NANOS1Q8WY41 292 aaKnown RBP7.01□□□□□ -1.29
HMGB1P18-201ENST00000438801 ITGA6P23229 1130 aa7□□□□□ -1.29
HMGB1P18-201ENST00000438801 KRT76Q01546 638 aa7□□□□□ -1.29
HMGB1P18-201ENST00000438801 RNF20Q5VTR2 975 aa7□□□□□ -1.29
HMGB1P18-201ENST00000438801 CCDC125Q86Z20 511 aa7□□□□□ -1.29
HMGB1P18-201ENST00000438801 SNRKQ9NRH2 765 aa7□□□□□ -1.29
HMGB1P18-201ENST00000438801 NDUFB9Q9Y6M9 179 aa7□□□□□ -1.29
HMGB1P18-201ENST00000438801 SENP3-EIF4A1A0A087X0R7 540 aa6.99□□□□□ -1.29
HMGB1P18-201ENST00000438801 APBB1O00213 710 aa6.99□□□□□ -1.29
HMGB1P18-201ENST00000438801 GPR37L1O60883 481 aa6.99□□□□□ -1.29
HMGB1P18-201ENST00000438801 ZNF592Q92610 1267 aa6.99□□□□□ -1.29
HMGB1P18-201ENST00000438801 CNTNAP3BQ96NU0 1288 aa6.99□□□□□ -1.29
HMGB1P18-201ENST00000438801 COL25A1Q9BXS0 654 aaPredicted RBP6.99□□□□□ -1.29
HMGB1P18-201ENST00000438801 CNTNAP3Q9BZ76 1288 aa6.99□□□□□ -1.29
HMGB1P18-201ENST00000438801 ZNF330Q9Y3S2 320 aaPredicted RBP6.99□□□□□ -1.29
HMGB1P18-201ENST00000438801 CDC14CA4D256 554 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms