RNA–Protein interactions for RNA: ENST00000437995.1

SURF1-202, Transcript of SURF1, cytochrome c oxidase assembly factor, humanhuman

TSL 5

Gene SURF1, Length 813 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SURF1-202ENST00000437995 ABCC6O95255 1503 aa27.11■■□□□ 1.93
SURF1-202ENST00000437995 USP35Q9P2H5 1018 aa27.1■■□□□ 1.93
SURF1-202ENST00000437995 AXIN2Q9Y2T1 843 aa27.1■■□□□ 1.93
SURF1-202ENST00000437995 KRT27Q7Z3Y8 459 aa27.09■■□□□ 1.93
SURF1-202ENST00000437995 COG3Q96JB2 828 aa27.09■■□□□ 1.93
SURF1-202ENST00000437995 CRB1P82279 1406 aa27.08■■□□□ 1.93
SURF1-202ENST00000437995 POLR3GLQ9BT43 218 aa27.08■■□□□ 1.93
SURF1-202ENST00000437995 BARGINQ6ZT62 677 aa27.07■■□□□ 1.92
SURF1-202ENST00000437995 TCP11L2Q8N4U5 519 aa27.07■■□□□ 1.92
SURF1-202ENST00000437995 LTN1O94822 1766 aa27.07■■□□□ 1.92
SURF1-202ENST00000437995 RGPD5Q99666 1765 aa27.07■■□□□ 1.92
SURF1-202ENST00000437995 FYB1O15117 783 aa27.05■■□□□ 1.92
SURF1-202ENST00000437995 THRAP3Q9Y2W1 955 aaKnown RBP27.05■■□□□ 1.92
SURF1-202ENST00000437995 WDR17Q8IZU2 1322 aa27.05■■□□□ 1.92
SURF1-202ENST00000437995 KIF20BQ96Q89 1820 aa27.04■■□□□ 1.92
SURF1-202ENST00000437995 CARD14Q9BXL6 1004 aa27.04■■□□□ 1.92
SURF1-202ENST00000437995 NSD3Q9BZ95 1437 aa27.04■■□□□ 1.92
SURF1-202ENST00000437995 TOM1L2Q6ZVM7 507 aa27.03■■□□□ 1.92
SURF1-202ENST00000437995 GGNBP2Q9H3C7 697 aa27.02■■□□□ 1.92
SURF1-202ENST00000437995 CSB-PGBD3P0DP91 1061 aa27■■□□□ 1.91
SURF1-202ENST00000437995 CCDC125Q86Z20 511 aa26.99■■□□□ 1.91
SURF1-202ENST00000437995 C11orf95C9JLR9 678 aaPredicted RBP26.98■■□□□ 1.91
SURF1-202ENST00000437995 BLMP54132 1417 aaPredicted RBP26.97■■□□□ 1.91
SURF1-202ENST00000437995 ERBB3P21860 1342 aa26.96■■□□□ 1.91
SURF1-202ENST00000437995 CARD10Q9BWT7 1032 aa26.96■■□□□ 1.91
SURF1-202ENST00000437995 PARP4Q9UKK3 1724 aaKnown RBP26.96■■□□□ 1.91
SURF1-202ENST00000437995 MAP3K19Q56UN5 1328 aa26.95■■□□□ 1.91
SURF1-202ENST00000437995 IP6K1Q92551 441 aa26.95■■□□□ 1.9
SURF1-202ENST00000437995 EP400Q96L91 3159 aa26.95■■□□□ 1.9
SURF1-202ENST00000437995 CGNL1Q0VF96 1302 aa26.94■■□□□ 1.9
SURF1-202ENST00000437995 WNK3Q9BYP7 1800 aa26.94■■□□□ 1.9
SURF1-202ENST00000437995 FBLN1P23142 703 aa26.93■■□□□ 1.9
SURF1-202ENST00000437995 ANKRD24Q8TF21 1146 aa26.93■■□□□ 1.9
SURF1-202ENST00000437995 CCDC7Q96M83 1385 aa26.93■■□□□ 1.9
SURF1-202ENST00000437995 PDE3BQ13370 1112 aa26.92■■□□□ 1.9
SURF1-202ENST00000437995 FAM182BQ5T319 152 aa26.92■■□□□ 1.9
SURF1-202ENST00000437995 AMPHP49418 695 aa26.91■■□□□ 1.9
SURF1-202ENST00000437995 CDCA7Q9BWT1 371 aaPredicted RBP26.91■■□□□ 1.9
SURF1-202ENST00000437995 PANK3Q9H999 370 aa26.91■■□□□ 1.9
SURF1-202ENST00000437995 KIF7Q2M1P5 1343 aa26.9■■□□□ 1.9
SURF1-202ENST00000437995 RTL1A6NKG5 1358 aa26.9■■□□□ 1.9
SURF1-202ENST00000437995 HOXC9P31274 260 aa26.9■■□□□ 1.9
SURF1-202ENST00000437995 RRS1Q15050 365 aaKnown RBP26.9■■□□□ 1.9
SURF1-202ENST00000437995 SF3B2Q13435 895 aaKnown RBP26.89■■□□□ 1.9
SURF1-202ENST00000437995 NLRP2Q9NX02 1062 aa26.89■■□□□ 1.9
SURF1-202ENST00000437995 LRRC37A3O60309 1634 aa26.89■■□□□ 1.9
SURF1-202ENST00000437995 FAM196AQ6ZSG2 479 aa26.88■■□□□ 1.89
SURF1-202ENST00000437995 DISP2A7MBM2 1401 aa26.88■■□□□ 1.89
SURF1-202ENST00000437995 FAM208AQ9UK61 1670 aaKnown RBP26.87■■□□□ 1.89
SURF1-202ENST00000437995 DDB1Q16531 1140 aa26.86■■□□□ 1.89
SURF1-202ENST00000437995 LTV1Q96GA3 475 aaPredicted RBP26.85■■□□□ 1.89
SURF1-202ENST00000437995 RGPD1P0DJD0 1748 aa26.85■■□□□ 1.89
SURF1-202ENST00000437995 ANKRD26Q9UPS8 1709 aa26.85■■□□□ 1.89
SURF1-202ENST00000437995 KIF24Q5T7B8 1368 aa26.84■■□□□ 1.89
SURF1-202ENST00000437995 FLT4P35916 1363 aa26.82■■□□□ 1.88
SURF1-202ENST00000437995 PEAK1Q9H792 1746 aa26.82■■□□□ 1.88
SURF1-202ENST00000437995 NSD2O96028 1365 aa26.81■■□□□ 1.88
SURF1-202ENST00000437995 DEFB132Q7Z7B7 95 aa26.8■■□□□ 1.88
SURF1-202ENST00000437995 OVOS2A0A0G2JMS6 1433 aa26.8■■□□□ 1.88
SURF1-202ENST00000437995 TNS1Q9HBL0 1735 aaKnown RBP26.79■■□□□ 1.88
SURF1-202ENST00000437995 BAG6P46379 1132 aa26.79■■□□□ 1.88
SURF1-202ENST00000437995 INSRP06213 1382 aa26.79■■□□□ 1.88
SURF1-202ENST00000437995 SMG6Q86US8 1419 aaKnown RBP26.79■■□□□ 1.88
SURF1-202ENST00000437995 EXOC5O00471 708 aa26.78■■□□□ 1.88
SURF1-202ENST00000437995 TRIM37O94972 964 aa26.78■■□□□ 1.88
SURF1-202ENST00000437995 IL2RBP14784 551 aa26.78■■□□□ 1.88
SURF1-202ENST00000437995 KNSTRNQ9Y448 316 aa26.78■■□□□ 1.88
SURF1-202ENST00000437995 EMILIN1Q9Y6C2 1016 aa26.78■■□□□ 1.88
SURF1-202ENST00000437995 TNS2Q63HR2 1409 aa26.78■■□□□ 1.88
SURF1-202ENST00000437995 HSP90AB2PQ58FF8 381 aa26.76■■□□□ 1.87
SURF1-202ENST00000437995 RGPD2P0DJD1 1756 aa26.76■■□□□ 1.87
SURF1-202ENST00000437995 WASHC2AQ641Q2 1341 aa26.75■■□□□ 1.87
SURF1-202ENST00000437995 MAP2P11137 1827 aaKnown RBP26.75■■□□□ 1.87
SURF1-202ENST00000437995 MARCH10Q8NA82 808 aaPredicted RBP26.75■■□□□ 1.87
SURF1-202ENST00000437995 PPM1GO15355 546 aaPredicted RBP26.73■■□□□ 1.87
SURF1-202ENST00000437995 TNNT2P45379 298 aaPredicted RBP26.73■■□□□ 1.87
SURF1-202ENST00000437995 POLKQ9UBT6 870 aa26.72■■□□□ 1.87
SURF1-202ENST00000437995 BCL9O00512 1426 aa26.72■■□□□ 1.87
SURF1-202ENST00000437995 NBPF6Q5VWK0 638 aa26.71■■□□□ 1.87
SURF1-202ENST00000437995 NBPF4Q96M43 638 aa26.71■■□□□ 1.87
SURF1-202ENST00000437995 SBF2Q86WG5 1849 aa26.69■■□□□ 1.86
SURF1-202ENST00000437995 EN1Q05925 392 aaPredicted RBP26.69■■□□□ 1.86
SURF1-202ENST00000437995 AMER1Q5JTC6 1135 aaPredicted RBP26.69■■□□□ 1.86
SURF1-202ENST00000437995 MORC1Q86VD1 984 aa26.69■■□□□ 1.86
SURF1-202ENST00000437995 APBA3O96018 575 aa26.68■■□□□ 1.86
SURF1-202ENST00000437995 USHBP1Q8N6Y0 703 aa26.67■■□□□ 1.86
SURF1-202ENST00000437995 PER1O15534 1290 aaPredicted RBP26.66■■□□□ 1.86
SURF1-202ENST00000437995 MEGF6O75095 1541 aa26.65■■□□□ 1.86
SURF1-202ENST00000437995 PARD3Q8TEW0 1356 aa26.63■■□□□ 1.85
SURF1-202ENST00000437995 CAMKK2Q96RR4 588 aa26.63■■□□□ 1.85
SURF1-202ENST00000437995 BCL11BQ9C0K0 894 aaPredicted RBP26.63■■□□□ 1.85
SURF1-202ENST00000437995 EZH2Q15910 746 aaKnown RBP26.62■■□□□ 1.85
SURF1-202ENST00000437995 RAPGEF4Q8WZA2 1011 aa26.62■■□□□ 1.85
SURF1-202ENST00000437995 NCAPD2Q15021 1401 aa26.61■■□□□ 1.85
SURF1-202ENST00000437995 ZCRB1Q8TBF4 217 aaKnown RBP26.6■■□□□ 1.85
SURF1-202ENST00000437995 TATP17735 454 aaPredicted RBP26.59■■□□□ 1.85
SURF1-202ENST00000437995 DDX54Q8TDD1 881 aaKnown RBP26.59■■□□□ 1.85
SURF1-202ENST00000437995 SHANK3Q9BYB0 1731 aa26.59■■□□□ 1.85
SURF1-202ENST00000437995 NPC1L1Q9UHC9 1359 aa26.58■■□□□ 1.85
SURF1-202ENST00000437995 NHSQ6T4R5 1651 aa26.58■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms