RNA–Protein interactions for RNA: ENST00000436630.6

RPE-208, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 2 BASIC

Gene RPE, Length 1,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-208ENST00000436630 COL14A1Q05707 1796 aaKnown RBP17.94■□□□□ 0.46
RPE-208ENST00000436630 LMO7Q8WWI1 1683 aa17.93■□□□□ 0.46
RPE-208ENST00000436630 HOXC9P31274 260 aa17.93■□□□□ 0.46
RPE-208ENST00000436630 IP6K1Q92551 441 aa17.93■□□□□ 0.46
RPE-208ENST00000436630 KIAA0232Q92628 1395 aa17.91■□□□□ 0.46
RPE-208ENST00000436630 FBLN1P23142 703 aa17.91■□□□□ 0.46
RPE-208ENST00000436630 CAMTA1Q9Y6Y1 1673 aa17.9■□□□□ 0.46
RPE-208ENST00000436630 RGPD5Q99666 1765 aa17.9■□□□□ 0.46
RPE-208ENST00000436630 CABLES1Q8TDN4 633 aa17.9■□□□□ 0.46
RPE-208ENST00000436630 SPATA31A6Q5VVP1 1343 aa17.9■□□□□ 0.46
RPE-208ENST00000436630 PRDM11Q9NQV5 511 aa17.89■□□□□ 0.45
RPE-208ENST00000436630 IL13P35225 146 aa17.88■□□□□ 0.45
RPE-208ENST00000436630 ZC3H6P61129 1189 aaKnown RBP17.88■□□□□ 0.45
RPE-208ENST00000436630 HSP90AB2PQ58FF8 381 aa17.88■□□□□ 0.45
RPE-208ENST00000436630 FAM9BQ8IZU0 186 aa17.88■□□□□ 0.45
RPE-208ENST00000436630 NWD2Q9ULI1 1742 aa17.88■□□□□ 0.45
RPE-208ENST00000436630 PLCH1Q4KWH8 1693 aa17.87■□□□□ 0.45
RPE-208ENST00000436630 PLEKHG5O94827 1062 aa17.87■□□□□ 0.45
RPE-208ENST00000436630 EIF4A2Q14240 407 aaKnown RBP17.87■□□□□ 0.45
RPE-208ENST00000436630 PNNQ9H307 717 aaKnown RBP17.87■□□□□ 0.45
RPE-208ENST00000436630 HSPA1LP34931 641 aa17.86■□□□□ 0.45
RPE-208ENST00000436630 ZBTB7CA1YPR0 619 aa17.85■□□□□ 0.45
RPE-208ENST00000436630 COL5A2P05997 1499 aaPredicted RBP17.84■□□□□ 0.45
RPE-208ENST00000436630 NCAPD2Q15021 1401 aa17.84■□□□□ 0.45
RPE-208ENST00000436630 ERBB3P21860 1342 aa17.84■□□□□ 0.45
RPE-208ENST00000436630 U2SURPO15042 1029 aaKnown RBP17.84■□□□□ 0.45
RPE-208ENST00000436630 U2AF1L5P0DN76 240 aaPredicted RBP17.84■□□□□ 0.45
RPE-208ENST00000436630 U2AF1Q01081 240 aaKnown RBP eCLIP17.84■□□□□ 0.45
RPE-208ENST00000436630 KDRP35968 1356 aa17.83■□□□□ 0.45
RPE-208ENST00000436630 IGSF1Q8N6C5 1336 aa17.83■□□□□ 0.44
RPE-208ENST00000436630 ADAMTS8Q9UP79 889 aa17.83■□□□□ 0.44
RPE-208ENST00000436630 NRAPQ86VF7 1730 aa17.83■□□□□ 0.44
RPE-208ENST00000436630 PLEKHG2Q9H7P9 1386 aa17.82■□□□□ 0.44
RPE-208ENST00000436630 RGPD2P0DJD1 1756 aa17.82■□□□□ 0.44
RPE-208ENST00000436630 FCHSD2O94868 740 aa17.81■□□□□ 0.44
RPE-208ENST00000436630 ANKRD24Q8TF21 1146 aa17.81■□□□□ 0.44
RPE-208ENST00000436630 NEFMP07197 916 aa17.8■□□□□ 0.44
RPE-208ENST00000436630 CHRNA2Q15822 529 aa17.8■□□□□ 0.44
RPE-208ENST00000436630 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.8■□□□□ 0.44
RPE-208ENST00000436630 NGEFQ8N5V2 710 aa17.79■□□□□ 0.44
RPE-208ENST00000436630 AXIN2Q9Y2T1 843 aa17.79■□□□□ 0.44
RPE-208ENST00000436630 WDR17Q8IZU2 1322 aa17.78■□□□□ 0.44
RPE-208ENST00000436630 MAPK8IP3Q9UPT6 1336 aa17.78■□□□□ 0.44
RPE-208ENST00000436630 RUNDC1Q96C34 613 aa17.78■□□□□ 0.44
RPE-208ENST00000436630 LTV1Q96GA3 475 aaPredicted RBP17.78■□□□□ 0.44
RPE-208ENST00000436630 RSPH6AQ9H0K4 717 aa17.78■□□□□ 0.44
RPE-208ENST00000436630 LRP6O75581 1613 aa17.78■□□□□ 0.44
RPE-208ENST00000436630 SLIT2O94813 1529 aa17.77■□□□□ 0.44
RPE-208ENST00000436630 FAM83GA6ND36 823 aa17.77■□□□□ 0.44
RPE-208ENST00000436630 EYA1Q99502 592 aa17.77■□□□□ 0.44
RPE-208ENST00000436630 PARP4Q9UKK3 1724 aaKnown RBP17.77■□□□□ 0.44
RPE-208ENST00000436630 NUTM2BA6NNL0 878 aaPredicted RBP17.76■□□□□ 0.43
RPE-208ENST00000436630 NUTM2EB1AL46 878 aaPredicted RBP17.76■□□□□ 0.43
RPE-208ENST00000436630 ADAMTS2O95450 1211 aa17.76■□□□□ 0.43
RPE-208ENST00000436630 CSB-PGBD3P0DP91 1061 aa17.76■□□□□ 0.43
RPE-208ENST00000436630 SULT6B1Q6IMI4 303 aa17.76■□□□□ 0.43
RPE-208ENST00000436630 NUTM2AQ8IVF1 878 aaPredicted RBP17.76■□□□□ 0.43
RPE-208ENST00000436630 CRB1P82279 1406 aa17.75■□□□□ 0.43
RPE-208ENST00000436630 NCBP3Q53F19 620 aaKnown RBP17.75■□□□□ 0.43
RPE-208ENST00000436630 WNK3Q9BYP7 1800 aa17.75■□□□□ 0.43
RPE-208ENST00000436630 HMOX1P09601 288 aa17.74■□□□□ 0.43
RPE-208ENST00000436630 PRKAR2BP31323 418 aa17.74■□□□□ 0.43
RPE-208ENST00000436630 HNRNPUQ00839 825 aaKnown RBP eCLIP17.74■□□□□ 0.43
RPE-208ENST00000436630 PLEKHF1Q96S99 279 aa17.74■□□□□ 0.43
RPE-208ENST00000436630 BTG4Q9NY30 223 aa17.74■□□□□ 0.43
RPE-208ENST00000436630 EVA1CP58658 441 aa17.73■□□□□ 0.43
RPE-208ENST00000436630 NBPF6Q5VWK0 638 aa17.73■□□□□ 0.43
RPE-208ENST00000436630 NBPF4Q96M43 638 aa17.73■□□□□ 0.43
RPE-208ENST00000436630 ZBED9Q6R2W3 1325 aa17.72■□□□□ 0.43
RPE-208ENST00000436630 CCDC146Q8IYE0 955 aa17.72■□□□□ 0.43
RPE-208ENST00000436630 CARD10Q9BWT7 1032 aa17.72■□□□□ 0.43
RPE-208ENST00000436630 NLRP2Q9NX02 1062 aa17.72■□□□□ 0.43
RPE-208ENST00000436630 PKD1L3Q7Z443 1732 aa17.72■□□□□ 0.43
RPE-208ENST00000436630 AEBP1Q8IUX7 1158 aa17.71■□□□□ 0.43
RPE-208ENST00000436630 YTHDC1Q96MU7 727 aaKnown RBP17.71■□□□□ 0.43
RPE-208ENST00000436630 DLG5Q8TDM6 1919 aa17.7■□□□□ 0.42
RPE-208ENST00000436630 MEX3CQ5U5Q3 659 aaKnown RBP17.7■□□□□ 0.42
RPE-208ENST00000436630 TOM1L2Q6ZVM7 507 aa17.7■□□□□ 0.42
RPE-208ENST00000436630 FNBP4Q8N3X1 1017 aaPredicted RBP17.69■□□□□ 0.42
RPE-208ENST00000436630 STRN4Q9NRL3 753 aa17.69■□□□□ 0.42
RPE-208ENST00000436630 APAF1O14727 1248 aa17.68■□□□□ 0.42
RPE-208ENST00000436630 TCP11L2Q8N4U5 519 aa17.68■□□□□ 0.42
RPE-208ENST00000436630 GAS2L2Q8NHY3 880 aa17.68■□□□□ 0.42
RPE-208ENST00000436630 RAPGEF4Q8WZA2 1011 aa17.68■□□□□ 0.42
RPE-208ENST00000436630 NGLY1Q96IV0 654 aa17.68■□□□□ 0.42
RPE-208ENST00000436630 C8orf37Q96NL8 207 aa17.68■□□□□ 0.42
RPE-208ENST00000436630 OVOS2A0A0G2JMS6 1433 aa17.67■□□□□ 0.42
RPE-208ENST00000436630 LMOD3Q0VAK6 560 aa17.67■□□□□ 0.42
RPE-208ENST00000436630 NFE2L2Q16236 605 aa17.67■□□□□ 0.42
RPE-208ENST00000436630 CCDC27Q2M243 656 aa17.67■□□□□ 0.42
RPE-208ENST00000436630 AMOTQ4VCS5 1084 aa17.67■□□□□ 0.42
RPE-208ENST00000436630 LARP1Q6PKG0 1096 aaKnown RBP17.67■□□□□ 0.42
RPE-208ENST00000436630 UNC5CLQ8IV45 518 aa17.67■□□□□ 0.42
RPE-208ENST00000436630 USHBP1Q8N6Y0 703 aa17.67■□□□□ 0.42
RPE-208ENST00000436630 BCL9LQ86UU0 1499 aa17.67■□□□□ 0.42
RPE-208ENST00000436630 MEGF6O75095 1541 aa17.67■□□□□ 0.42
RPE-208ENST00000436630 TMPOP42166 694 aaKnown RBP17.66■□□□□ 0.42
RPE-208ENST00000436630 THRAP3Q9Y2W1 955 aaKnown RBP17.66■□□□□ 0.42
RPE-208ENST00000436630 TATP17735 454 aaPredicted RBP17.65■□□□□ 0.42
RPE-208ENST00000436630 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.65■□□□□ 0.421e-7■■□□□ 14.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms