RNA–Protein interactions for RNA: ENST00000435953.2

AC004448.3-201, humanhuman

TSL 2 BASIC

Gene AC004448.3, Length 543 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004448.3-201ENST00000435953 NUTM2EB1AL46 878 aaPredicted RBP13.16□□□□□ -0.3
AC004448.3-201ENST00000435953 NUTM2AQ8IVF1 878 aaPredicted RBP13.16□□□□□ -0.3
AC004448.3-201ENST00000435953 ANKRD26Q9UPS8 1709 aa13.16□□□□□ -0.3
AC004448.3-201ENST00000435953 CDK12Q9NYV4 1490 aaPredicted RBP13.16□□□□□ -0.3
AC004448.3-201ENST00000435953 FCHSD2O94868 740 aa13.15□□□□□ -0.3
AC004448.3-201ENST00000435953 ADAMTS2O95450 1211 aa13.15□□□□□ -0.3
AC004448.3-201ENST00000435953 ANKRD24Q8TF21 1146 aa13.15□□□□□ -0.3
AC004448.3-201ENST00000435953 EYA1Q99502 592 aa13.15□□□□□ -0.3
AC004448.3-201ENST00000435953 USP54Q70EL1 1684 aa13.15□□□□□ -0.31
AC004448.3-201ENST00000435953 FBXO41Q8TF61 875 aa13.14□□□□□ -0.31
AC004448.3-201ENST00000435953 PNNQ9H307 717 aaKnown RBP13.14□□□□□ -0.31
AC004448.3-201ENST00000435953 COL3A1P02461 1466 aaPredicted RBP13.14□□□□□ -0.31
AC004448.3-201ENST00000435953 SPATA31A6Q5VVP1 1343 aa13.13□□□□□ -0.31
AC004448.3-201ENST00000435953 COL16A1Q07092 1604 aaPredicted RBP13.13□□□□□ -0.31
AC004448.3-201ENST00000435953 NBPF6Q5VWK0 638 aa13.13□□□□□ -0.31
AC004448.3-201ENST00000435953 NBPF4Q96M43 638 aa13.13□□□□□ -0.31
AC004448.3-201ENST00000435953 PHLPP1O60346 1717 aa13.13□□□□□ -0.31
AC004448.3-201ENST00000435953 HMOX1P09601 288 aa13.12□□□□□ -0.31
AC004448.3-201ENST00000435953 EVA1CP58658 441 aa13.12□□□□□ -0.31
AC004448.3-201ENST00000435953 SULT6B1Q6IMI4 303 aa13.12□□□□□ -0.31
AC004448.3-201ENST00000435953 RUNDC1Q96C34 613 aa13.12□□□□□ -0.31
AC004448.3-201ENST00000435953 YTHDC1Q96MU7 727 aaKnown RBP13.12□□□□□ -0.31
AC004448.3-201ENST00000435953 MARF1Q9Y4F3 1742 aaKnown RBP13.12□□□□□ -0.31
AC004448.3-201ENST00000435953 BLMP54132 1417 aaPredicted RBP13.12□□□□□ -0.31
AC004448.3-201ENST00000435953 CSB-PGBD3P0DP91 1061 aa13.11□□□□□ -0.31
AC004448.3-201ENST00000435953 CCDC146Q8IYE0 955 aa13.11□□□□□ -0.31
AC004448.3-201ENST00000435953 PLEKHF1Q96S99 279 aa13.11□□□□□ -0.31
AC004448.3-201ENST00000435953 RSPH6AQ9H0K4 717 aa13.11□□□□□ -0.31
AC004448.3-201ENST00000435953 BTG4Q9NY30 223 aa13.11□□□□□ -0.31
AC004448.3-201ENST00000435953 IGSF1Q8N6C5 1336 aa13.11□□□□□ -0.31
AC004448.3-201ENST00000435953 AEBP1Q8IUX7 1158 aa13.1□□□□□ -0.31
AC004448.3-201ENST00000435953 NLRP2Q9NX02 1062 aa13.1□□□□□ -0.31
AC004448.3-201ENST00000435953 ERBB3P21860 1342 aa13.1□□□□□ -0.31
AC004448.3-201ENST00000435953 MAP2P11137 1827 aaKnown RBP13.09□□□□□ -0.31
AC004448.3-201ENST00000435953 PRKAR2BP31323 418 aa13.09□□□□□ -0.31
AC004448.3-201ENST00000435953 HNRNPUQ00839 825 aaKnown RBP eCLIP13.09□□□□□ -0.31
AC004448.3-201ENST00000435953 PEAK1Q9H792 1746 aa13.08□□□□□ -0.32
AC004448.3-201ENST00000435953 APAF1O14727 1248 aa13.08□□□□□ -0.32
AC004448.3-201ENST00000435953 TCP11L2Q8N4U5 519 aa13.08□□□□□ -0.32
AC004448.3-201ENST00000435953 USHBP1Q8N6Y0 703 aa13.08□□□□□ -0.32
AC004448.3-201ENST00000435953 NGLY1Q96IV0 654 aa13.08□□□□□ -0.32
AC004448.3-201ENST00000435953 PHACTR3Q96KR7 559 aa13.08□□□□□ -0.32
AC004448.3-201ENST00000435953 STRN4Q9NRL3 753 aa13.08□□□□□ -0.32
AC004448.3-201ENST00000435953 COL22A1Q8NFW1 1626 aaPredicted RBP13.07□□□□□ -0.32
AC004448.3-201ENST00000435953 NEFMP07197 916 aa13.07□□□□□ -0.32
AC004448.3-201ENST00000435953 LARP1Q6PKG0 1096 aaKnown RBP13.07□□□□□ -0.32
AC004448.3-201ENST00000435953 TOM1L2Q6ZVM7 507 aa13.07□□□□□ -0.32
AC004448.3-201ENST00000435953 CARD10Q9BWT7 1032 aa13.07□□□□□ -0.32
AC004448.3-201ENST00000435953 WDR17Q8IZU2 1322 aa13.07□□□□□ -0.32
AC004448.3-201ENST00000435953 SENP3-EIF4A1A0A087X0R7 540 aa13.06□□□□□ -0.32
AC004448.3-201ENST00000435953 FNBP4Q8N3X1 1017 aaPredicted RBP13.06□□□□□ -0.32
AC004448.3-201ENST00000435953 C8orf37Q96NL8 207 aa13.06□□□□□ -0.32
AC004448.3-201ENST00000435953 KDRP35968 1356 aa13.06□□□□□ -0.32
AC004448.3-201ENST00000435953 PHRF1Q9P1Y6 1649 aaKnown RBP13.06□□□□□ -0.32
AC004448.3-201ENST00000435953 CAMTA1Q9Y6Y1 1673 aa13.05□□□□□ -0.32
AC004448.3-201ENST00000435953 NCBP3Q53F19 620 aaKnown RBP13.05□□□□□ -0.32
AC004448.3-201ENST00000435953 MEX3CQ5U5Q3 659 aaKnown RBP13.05□□□□□ -0.32
AC004448.3-201ENST00000435953 NGEFQ8N5V2 710 aa13.05□□□□□ -0.32
AC004448.3-201ENST00000435953 SALL2Q9Y467 1007 aaPredicted RBP13.05□□□□□ -0.32
AC004448.3-201ENST00000435953 MAPK8IP3Q9UPT6 1336 aa13.05□□□□□ -0.32
AC004448.3-201ENST00000435953 ABCC6O95255 1503 aa13.04□□□□□ -0.32
AC004448.3-201ENST00000435953 TMPOP42166 694 aaKnown RBP13.04□□□□□ -0.32
AC004448.3-201ENST00000435953 UNC5CLQ8IV45 518 aa13.04□□□□□ -0.32
AC004448.3-201ENST00000435953 CRYBG1Q9Y4K1 1723 aa13.04□□□□□ -0.32
AC004448.3-201ENST00000435953 RIPK4P57078 832 aa13.03□□□□□ -0.32
AC004448.3-201ENST00000435953 NEUROD2Q15784 382 aa13.03□□□□□ -0.32
AC004448.3-201ENST00000435953 NFE2L2Q16236 605 aa13.03□□□□□ -0.32
AC004448.3-201ENST00000435953 RRP7AQ9Y3A4 280 aaKnown RBP13.03□□□□□ -0.32
AC004448.3-201ENST00000435953 COL5A2P05997 1499 aaPredicted RBP13.03□□□□□ -0.32
AC004448.3-201ENST00000435953 COL18A1P39060 1754 aa13.02□□□□□ -0.32
AC004448.3-201ENST00000435953 MTHFSDQ2M296 383 aaKnown RBP13.02□□□□□ -0.33
AC004448.3-201ENST00000435953 PLEKHO1Q53GL0 409 aaPredicted RBP13.02□□□□□ -0.33
AC004448.3-201ENST00000435953 RAPGEF4Q8WZA2 1011 aa13.02□□□□□ -0.33
AC004448.3-201ENST00000435953 SHPRHQ149N8 1683 aa13.02□□□□□ -0.33
AC004448.3-201ENST00000435953 TATP17735 454 aaPredicted RBP13.01□□□□□ -0.33
AC004448.3-201ENST00000435953 CCDC27Q2M243 656 aa13.01□□□□□ -0.33
AC004448.3-201ENST00000435953 AMOTQ4VCS5 1084 aa13.01□□□□□ -0.33
AC004448.3-201ENST00000435953 USP21Q9UK80 565 aa13.01□□□□□ -0.33
AC004448.3-201ENST00000435953 LRP6O75581 1613 aa13□□□□□ -0.33
AC004448.3-201ENST00000435953 SLIT2O94813 1529 aa13□□□□□ -0.33
AC004448.3-201ENST00000435953 NCAPD2Q15021 1401 aa13□□□□□ -0.33
AC004448.3-201ENST00000435953 ZBED9Q6R2W3 1325 aa13□□□□□ -0.33
AC004448.3-201ENST00000435953 VPS72Q15906 364 aa13□□□□□ -0.33
AC004448.3-201ENST00000435953 GAS2L2Q8NHY3 880 aa13□□□□□ -0.33
AC004448.3-201ENST00000435953 PHF23Q9BUL5 403 aaPredicted RBP13□□□□□ -0.33
AC004448.3-201ENST00000435953 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13□□□□□ -0.33
AC004448.3-201ENST00000435953 USP35Q9P2H5 1018 aa13□□□□□ -0.33
AC004448.3-201ENST00000435953 LTN1O94822 1766 aa12.99□□□□□ -0.33
AC004448.3-201ENST00000435953 CRB1P82279 1406 aa12.99□□□□□ -0.33
AC004448.3-201ENST00000435953 IL2RBP14784 551 aa12.99□□□□□ -0.33
AC004448.3-201ENST00000435953 WWC1Q8IX03 1113 aa12.99□□□□□ -0.33
AC004448.3-201ENST00000435953 TRIM35Q9UPQ4 493 aa12.99□□□□□ -0.33
AC004448.3-201ENST00000435953 THRAP3Q9Y2W1 955 aaKnown RBP12.99□□□□□ -0.33
AC004448.3-201ENST00000435953 LMO7Q8WWI1 1683 aa12.99□□□□□ -0.33
AC004448.3-201ENST00000435953 BCL9LQ86UU0 1499 aa12.98□□□□□ -0.33
AC004448.3-201ENST00000435953 AFF2P51816 1311 aa12.98□□□□□ -0.33
AC004448.3-201ENST00000435953 SPATA31A1Q5TZJ5 1347 aa12.98□□□□□ -0.33
AC004448.3-201ENST00000435953 SPATA31A5Q5VU36 1347 aa12.98□□□□□ -0.33
AC004448.3-201ENST00000435953 SPATA31A7Q8IWB4 1347 aa12.98□□□□□ -0.33
AC004448.3-201ENST00000435953 SPG7Q9UQ90 795 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 343.5 ms