RNA–Protein interactions for RNA: ENST00000434734.1

HMGB3P10-201, Transcript of high mobility group box 3 pseudogene 10, humanhuman

BASIC

Gene HMGB3P10, Length 572 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P10-201ENST00000434734 ZPR1O75312 459 aa7.56□□□□□ -1.2
HMGB3P10-201ENST00000434734 SLC10A3P09131 477 aa7.56□□□□□ -1.2
HMGB3P10-201ENST00000434734 HDLBPQ00341 1268 aaKnown RBP7.56□□□□□ -1.2
HMGB3P10-201ENST00000434734 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.56□□□□□ -1.2
HMGB3P10-201ENST00000434734 RIPOR2Q9Y4F9 1068 aa7.56□□□□□ -1.2
HMGB3P10-201ENST00000434734 LOC102724159A0A0B4J2E5 919 aa7.55□□□□□ -1.2
HMGB3P10-201ENST00000434734 NUTM2BA6NNL0 878 aaPredicted RBP7.55□□□□□ -1.2
HMGB3P10-201ENST00000434734 NUTM2EB1AL46 878 aaPredicted RBP7.55□□□□□ -1.2
HMGB3P10-201ENST00000434734 PWP2Q15269 919 aaKnown RBP7.55□□□□□ -1.2
HMGB3P10-201ENST00000434734 NUTM2DQ5VT03 806 aaPredicted RBP7.55□□□□□ -1.2
HMGB3P10-201ENST00000434734 NUTM2AQ8IVF1 878 aaPredicted RBP7.55□□□□□ -1.2
HMGB3P10-201ENST00000434734 PPME1Q9Y570 386 aa7.55□□□□□ -1.2
HMGB3P10-201ENST00000434734 COPS2P61201 443 aa7.54□□□□□ -1.2
HMGB3P10-201ENST00000434734 CTDSPL2Q05D32 466 aa7.54□□□□□ -1.2
HMGB3P10-201ENST00000434734 EPS8L1Q8TE68 723 aa7.54□□□□□ -1.2
HMGB3P10-201ENST00000434734 ZNF516Q92618 1163 aa7.54□□□□□ -1.2
HMGB3P10-201ENST00000434734 CDCA7Q9BWT1 371 aaPredicted RBP7.54□□□□□ -1.2
HMGB3P10-201ENST00000434734 SLC52A1Q9NWF4 448 aa7.54□□□□□ -1.2
HMGB3P10-201ENST00000434734 SUGT1Q9Y2Z0 365 aa7.54□□□□□ -1.2
HMGB3P10-201ENST00000434734 SBNO2Q9Y2G9 1366 aa7.54□□□□□ -1.2
HMGB3P10-201ENST00000434734 PIK3CDO00329 1044 aa7.53□□□□□ -1.2
HMGB3P10-201ENST00000434734 NR1I2O75469 434 aa7.53□□□□□ -1.2
HMGB3P10-201ENST00000434734 CD46P15529 392 aa7.53□□□□□ -1.2
HMGB3P10-201ENST00000434734 GGCXP38435 758 aa7.53□□□□□ -1.2
HMGB3P10-201ENST00000434734 RAD51AP2Q09MP3 1159 aa7.52□□□□□ -1.21
HMGB3P10-201ENST00000434734 FAM69CQ0P6D2 419 aa7.52□□□□□ -1.21
HMGB3P10-201ENST00000434734 SEMA3FQ13275 785 aa7.52□□□□□ -1.21
HMGB3P10-201ENST00000434734 BLOC1S3Q6QNY0 202 aa7.52□□□□□ -1.21
HMGB3P10-201ENST00000434734 NOP9Q86U38 636 aaKnown RBP7.52□□□□□ -1.21
HMGB3P10-201ENST00000434734 LRRN4Q8WUT4 740 aa7.52□□□□□ -1.21
HMGB3P10-201ENST00000434734 PIK3R5Q8WYR1 880 aa7.52□□□□□ -1.21
HMGB3P10-201ENST00000434734 BACH2Q9BYV9 841 aa7.52□□□□□ -1.21
HMGB3P10-201ENST00000434734 TANGO6Q9C0B7 1094 aa7.52□□□□□ -1.21
HMGB3P10-201ENST00000434734 BCCIPQ9P287 314 aaKnown RBP eCLIP7.52□□□□□ -1.21
HMGB3P10-201ENST00000434734 TMA7Q9Y2S6 64 aaKnown RBP7.52□□□□□ -1.21
HMGB3P10-201ENST00000434734 PLEKHD1A6NEE1 506 aa7.51□□□□□ -1.21
HMGB3P10-201ENST00000434734 SOX11P35716 441 aa7.51□□□□□ -1.21
HMGB3P10-201ENST00000434734 PPP1R18Q6NYC8 613 aa7.51□□□□□ -1.21
HMGB3P10-201ENST00000434734 NUTM1Q86Y26 1132 aa7.51□□□□□ -1.21
HMGB3P10-201ENST00000434734 LARGE2Q8N3Y3 721 aa7.51□□□□□ -1.21
HMGB3P10-201ENST00000434734 RDH13Q8NBN7 331 aa7.51□□□□□ -1.21
HMGB3P10-201ENST00000434734 DHX38Q92620 1227 aaKnown RBP7.51□□□□□ -1.21
HMGB3P10-201ENST00000434734 VTI1AQ96AJ9 217 aa7.51□□□□□ -1.21
HMGB3P10-201ENST00000434734 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.51□□□□□ -1.21
HMGB3P10-201ENST00000434734 KLHL42Q9P2K6 505 aa7.51□□□□□ -1.21
HMGB3P10-201ENST00000434734 DDX11L8A8MPP1 907 aa7.5□□□□□ -1.21
HMGB3P10-201ENST00000434734 CRTC2Q53ET0 693 aaPredicted RBP7.5□□□□□ -1.21
HMGB3P10-201ENST00000434734 USP17L15C9J2P7 530 aa7.49□□□□□ -1.21
HMGB3P10-201ENST00000434734 USP17L10C9JJH3 530 aa7.49□□□□□ -1.21
HMGB3P10-201ENST00000434734 USP17L13C9JLJ4 530 aa7.49□□□□□ -1.21
HMGB3P10-201ENST00000434734 USP17L12C9JPN9 530 aa7.49□□□□□ -1.21
HMGB3P10-201ENST00000434734 USP17L11C9JVI0 530 aa7.49□□□□□ -1.21
HMGB3P10-201ENST00000434734 USP17L21D6R901 530 aa7.49□□□□□ -1.21
HMGB3P10-201ENST00000434734 USP17L18D6R9N7 530 aa7.49□□□□□ -1.21
HMGB3P10-201ENST00000434734 USP17L22D6RA61 530 aa7.49□□□□□ -1.21
HMGB3P10-201ENST00000434734 USP17L17D6RBQ6 530 aa7.49□□□□□ -1.21
HMGB3P10-201ENST00000434734 USP17L19D6RCP7 530 aa7.49□□□□□ -1.21
HMGB3P10-201ENST00000434734 USP17L20D6RJB6 530 aa7.49□□□□□ -1.21
HMGB3P10-201ENST00000434734 CLSTN1O94985 981 aa7.49□□□□□ -1.21
HMGB3P10-201ENST00000434734 ATP2B4P23634 1241 aa7.49□□□□□ -1.21
HMGB3P10-201ENST00000434734 GCGRP47871 477 aa7.49□□□□□ -1.21
HMGB3P10-201ENST00000434734 USP17L24Q0WX57 530 aa7.49□□□□□ -1.21
HMGB3P10-201ENST00000434734 NKX2-3Q8TAU0 364 aa7.49□□□□□ -1.21
HMGB3P10-201ENST00000434734 CLP1Q92989 425 aaKnown RBP7.49□□□□□ -1.21
HMGB3P10-201ENST00000434734 TINF2Q9BSI4 451 aa7.49□□□□□ -1.21
HMGB3P10-201ENST00000434734 PIF1Q9H611 641 aa7.49□□□□□ -1.21
HMGB3P10-201ENST00000434734 TLDC2A0PJX2 215 aa7.48□□□□□ -1.21
HMGB3P10-201ENST00000434734 USP17L3A6NCW0 530 aa7.48□□□□□ -1.21
HMGB3P10-201ENST00000434734 USP17L4A6NCW7 530 aa7.48□□□□□ -1.21
HMGB3P10-201ENST00000434734 GJA5P36382 358 aa7.48□□□□□ -1.21
HMGB3P10-201ENST00000434734 CCDC144BQ3MJ40 725 aa7.48□□□□□ -1.21
HMGB3P10-201ENST00000434734 LDLRAD1Q5T700 205 aa7.48□□□□□ -1.21
HMGB3P10-201ENST00000434734 EGFLAMQ63HQ2 1017 aa7.48□□□□□ -1.21
HMGB3P10-201ENST00000434734 USP17L2Q6R6M4 530 aa7.48□□□□□ -1.21
HMGB3P10-201ENST00000434734 USP17L1Q7RTZ2 530 aa7.48□□□□□ -1.21
HMGB3P10-201ENST00000434734 IQSEC3Q9UPP2 1182 aaPredicted RBP7.48□□□□□ -1.21
HMGB3P10-201ENST00000434734 V9GY48 417 aaPredicted RBP7.48□□□□□ -1.21
HMGB3P10-201ENST00000434734 TPD52L2O43399 206 aaKnown RBP7.47□□□□□ -1.21
HMGB3P10-201ENST00000434734 ATP6V1AP38606 617 aa7.47□□□□□ -1.21
HMGB3P10-201ENST00000434734 ZNF211Q13398 564 aaPredicted RBP7.47□□□□□ -1.21
HMGB3P10-201ENST00000434734 MRPL58Q14197 206 aaKnown RBP7.47□□□□□ -1.21
HMGB3P10-201ENST00000434734 GRIPAP1Q4V328 841 aa7.47□□□□□ -1.21
HMGB3P10-201ENST00000434734 PRPF38BQ5VTL8 546 aaKnown RBP7.47□□□□□ -1.21
HMGB3P10-201ENST00000434734 SDE2Q6IQ49 451 aa7.47□□□□□ -1.21
HMGB3P10-201ENST00000434734 NLGN1Q8N2Q7 840 aa7.47□□□□□ -1.21
HMGB3P10-201ENST00000434734 ANO2Q9NQ90 1003 aa7.47□□□□□ -1.21
HMGB3P10-201ENST00000434734 CUEDC1Q9NWM3 386 aaPredicted RBP7.47□□□□□ -1.21
HMGB3P10-201ENST00000434734 TBX22Q9Y458 520 aa7.47□□□□□ -1.21
HMGB3P10-201ENST00000434734 H3BRB1 525 aa7.46□□□□□ -1.22
HMGB3P10-201ENST00000434734 SCAMP3O14828 347 aaKnown RBP7.46□□□□□ -1.22
HMGB3P10-201ENST00000434734 ADH1BP00325 375 aa7.46□□□□□ -1.22
HMGB3P10-201ENST00000434734 MAPK1P28482 360 aa7.46□□□□□ -1.22
HMGB3P10-201ENST00000434734 MORN1Q5T089 497 aa7.46□□□□□ -1.22
HMGB3P10-201ENST00000434734 SCUBE3Q8IX30 993 aa7.46□□□□□ -1.22
HMGB3P10-201ENST00000434734 DEPDC4Q8N2C3 294 aa7.46□□□□□ -1.22
HMGB3P10-201ENST00000434734 SPACA7Q96KW9 195 aa7.46□□□□□ -1.22
HMGB3P10-201ENST00000434734 IRX2Q9BZI1 471 aaPredicted RBP7.46□□□□□ -1.22
HMGB3P10-201ENST00000434734 ZBTB3Q9H5J0 574 aa7.46□□□□□ -1.22
HMGB3P10-201ENST00000434734 TUT1Q9H6E5 874 aaKnown RBP7.46□□□□□ -1.22
HMGB3P10-201ENST00000434734 PRKAG2Q9UGJ0 569 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms