RNA–Protein interactions for RNA: ENST00000433260.1

HMGB3P24-201, Transcript of high mobility group box 3 pseudogene 24, humanhuman

BASIC

Gene HMGB3P24, Length 622 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P24-201ENST00000433260 TTC21BQ7Z4L5 1316 aa8.04□□□□□ -1.12
HMGB3P24-201ENST00000433260 BTG4Q9NY30 223 aa8.04□□□□□ -1.12
HMGB3P24-201ENST00000433260 TERF2IPQ9NYB0 399 aa8.04□□□□□ -1.12
HMGB3P24-201ENST00000433260 SBNO2Q9Y2G9 1366 aa8.04□□□□□ -1.12
HMGB3P24-201ENST00000433260 USP6P35125 1406 aa8.03□□□□□ -1.12
HMGB3P24-201ENST00000433260 EVA1CP58658 441 aa8.03□□□□□ -1.12
HMGB3P24-201ENST00000433260 NME9Q86XW9 330 aa8.03□□□□□ -1.12
HMGB3P24-201ENST00000433260 UNC5CLQ8IV45 518 aa8.03□□□□□ -1.12
HMGB3P24-201ENST00000433260 PUS7Q96PZ0 661 aaKnown RBP8.03□□□□□ -1.12
HMGB3P24-201ENST00000433260 PRDM11Q9NQV5 511 aa8.03□□□□□ -1.12
HMGB3P24-201ENST00000433260 STRN4Q9NRL3 753 aa8.03□□□□□ -1.12
HMGB3P24-201ENST00000433260 TRPC5Q9UL62 973 aaPredicted RBP8.03□□□□□ -1.12
HMGB3P24-201ENST00000433260 ABCA3Q99758 1704 aa8.03□□□□□ -1.12
HMGB3P24-201ENST00000433260 BCL9LQ86UU0 1499 aa8.02□□□□□ -1.13
HMGB3P24-201ENST00000433260 C11orf95C9JLR9 678 aaPredicted RBP8.02□□□□□ -1.13
HMGB3P24-201ENST00000433260 SOCS7O14512 581 aa8.02□□□□□ -1.13
HMGB3P24-201ENST00000433260 GCP02774 474 aa8.02□□□□□ -1.13
HMGB3P24-201ENST00000433260 RBM6P78332 1123 aaKnown RBP8.02□□□□□ -1.13
HMGB3P24-201ENST00000433260 CDCA8Q53HL2 280 aa8.02□□□□□ -1.13
HMGB3P24-201ENST00000433260 CPSF1Q10570 1443 aaKnown RBP8.02□□□□□ -1.13
HMGB3P24-201ENST00000433260 CRYBG1Q9Y4K1 1723 aa8.01□□□□□ -1.13
HMGB3P24-201ENST00000433260 KIAA0232Q92628 1395 aa8.01□□□□□ -1.13
HMGB3P24-201ENST00000433260 RGL2O15211 777 aa8.01□□□□□ -1.13
HMGB3P24-201ENST00000433260 GJD4Q96KN9 370 aaPredicted RBP8.01□□□□□ -1.13
HMGB3P24-201ENST00000433260 TSPYL2Q9H2G4 693 aaPredicted RBP8.01□□□□□ -1.13
HMGB3P24-201ENST00000433260 USP35Q9P2H5 1018 aa8.01□□□□□ -1.13
HMGB3P24-201ENST00000433260 PLCH1Q4KWH8 1693 aa8.01□□□□□ -1.13
HMGB3P24-201ENST00000433260 TTC21AQ8NDW8 1320 aa8.01□□□□□ -1.13
HMGB3P24-201ENST00000433260 CD163L1Q9NR16 1453 aa8□□□□□ -1.13
HMGB3P24-201ENST00000433260 PHRF1Q9P1Y6 1649 aaKnown RBP8□□□□□ -1.13
HMGB3P24-201ENST00000433260 A0A1W2PP64 1363 aa8□□□□□ -1.13
HMGB3P24-201ENST00000433260 A0A0G2JS52 829 aa8□□□□□ -1.13
HMGB3P24-201ENST00000433260 CHRM1P11229 460 aaPredicted RBP8□□□□□ -1.13
HMGB3P24-201ENST00000433260 FBLN1P23142 703 aa8□□□□□ -1.13
HMGB3P24-201ENST00000433260 MYT1Q01538 1121 aa8□□□□□ -1.13
HMGB3P24-201ENST00000433260 SSH2Q76I76 1423 aa8□□□□□ -1.13
HMGB3P24-201ENST00000433260 MON2Q7Z3U7 1717 aa8□□□□□ -1.13
HMGB3P24-201ENST00000433260 COL14A1Q05707 1796 aaKnown RBP7.99□□□□□ -1.13
HMGB3P24-201ENST00000433260 BRD4O60885 1362 aaPredicted RBP7.99□□□□□ -1.13
HMGB3P24-201ENST00000433260 SLIT2O94813 1529 aa7.99□□□□□ -1.13
HMGB3P24-201ENST00000433260 PIK3C2AO00443 1686 aa7.99□□□□□ -1.13
HMGB3P24-201ENST00000433260 VPS72Q15906 364 aa7.99□□□□□ -1.13
HMGB3P24-201ENST00000433260 KCNH5Q8NCM2 988 aa7.99□□□□□ -1.13
HMGB3P24-201ENST00000433260 CARD14Q9BXL6 1004 aa7.99□□□□□ -1.13
HMGB3P24-201ENST00000433260 GGNBP2Q9H3C7 697 aa7.99□□□□□ -1.13
HMGB3P24-201ENST00000433260 RGPD5Q99666 1765 aa7.99□□□□□ -1.13
HMGB3P24-201ENST00000433260 ATRNO75882 1429 aa7.98□□□□□ -1.13
HMGB3P24-201ENST00000433260 AXIN2Q9Y2T1 843 aa7.98□□□□□ -1.13
HMGB3P24-201ENST00000433260 USP19O94966 1318 aa7.98□□□□□ -1.13
HMGB3P24-201ENST00000433260 NWD2Q9ULI1 1742 aa7.98□□□□□ -1.13
HMGB3P24-201ENST00000433260 FYB1O15117 783 aa7.97□□□□□ -1.13
HMGB3P24-201ENST00000433260 FAM98CQ17RN3 349 aaKnown RBP7.97□□□□□ -1.13
HMGB3P24-201ENST00000433260 LARP1Q6PKG0 1096 aaKnown RBP7.97□□□□□ -1.13
HMGB3P24-201ENST00000433260 COG3Q96JB2 828 aa7.97□□□□□ -1.13
HMGB3P24-201ENST00000433260 PANK3Q9H999 370 aa7.97□□□□□ -1.13
HMGB3P24-201ENST00000433260 TNKS1BP1Q9C0C2 1729 aaKnown RBP7.97□□□□□ -1.13
HMGB3P24-201ENST00000433260 NRKQ7Z2Y5 1582 aa7.97□□□□□ -1.13
HMGB3P24-201ENST00000433260 ANKRD36BQ8N2N9 1353 aa7.97□□□□□ -1.13
HMGB3P24-201ENST00000433260 EDC4Q6P2E9 1401 aaKnown RBP7.96□□□□□ -1.13
HMGB3P24-201ENST00000433260 CAMTA1Q9Y6Y1 1673 aa7.96□□□□□ -1.13
HMGB3P24-201ENST00000433260 RIOK3O14730 519 aaKnown RBP7.96□□□□□ -1.14
HMGB3P24-201ENST00000433260 CSB-PGBD3P0DP91 1061 aa7.96□□□□□ -1.14
HMGB3P24-201ENST00000433260 PYGBP11216 843 aa7.96□□□□□ -1.14
HMGB3P24-201ENST00000433260 CNGB1Q14028 1251 aaPredicted RBP7.96□□□□□ -1.14
HMGB3P24-201ENST00000433260 TOM1L2Q6ZVM7 507 aa7.96□□□□□ -1.14
HMGB3P24-201ENST00000433260 ARHGEF25Q86VW2 580 aa7.96□□□□□ -1.14
HMGB3P24-201ENST00000433260 SEPT12Q8IYM1 358 aa7.96□□□□□ -1.14
HMGB3P24-201ENST00000433260 LTV1Q96GA3 475 aaPredicted RBP7.96□□□□□ -1.14
HMGB3P24-201ENST00000433260 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.96□□□□□ -1.14
HMGB3P24-201ENST00000433260 GLI3P10071 1580 aa7.96□□□□□ -1.14
HMGB3P24-201ENST00000433260 USP31Q70CQ4 1352 aa7.96□□□□□ -1.14
HMGB3P24-201ENST00000433260 NINLQ9Y2I6 1382 aa7.96□□□□□ -1.14
HMGB3P24-201ENST00000433260 MYOM1P52179 1685 aa7.95□□□□□ -1.14
HMGB3P24-201ENST00000433260 RGS12O14924 1447 aa7.95□□□□□ -1.14
HMGB3P24-201ENST00000433260 NRAPQ86VF7 1730 aa7.95□□□□□ -1.14
HMGB3P24-201ENST00000433260 LTN1O94822 1766 aa7.95□□□□□ -1.14
HMGB3P24-201ENST00000433260 SLIT3O75094 1523 aa7.95□□□□□ -1.14
HMGB3P24-201ENST00000433260 BRWD3Q6RI45 1802 aa7.95□□□□□ -1.14
HMGB3P24-201ENST00000433260 FAM182BQ5T319 152 aa7.95□□□□□ -1.14
HMGB3P24-201ENST00000433260 SPATA31A5Q5VU36 1347 aa7.95□□□□□ -1.14
HMGB3P24-201ENST00000433260 SPATA31A7Q8IWB4 1347 aa7.95□□□□□ -1.14
HMGB3P24-201ENST00000433260 CPDO75976 1380 aa7.95□□□□□ -1.14
HMGB3P24-201ENST00000433260 TNNT2P45379 298 aaPredicted RBP7.94□□□□□ -1.14
HMGB3P24-201ENST00000433260 AMPHP49418 695 aa7.94□□□□□ -1.14
HMGB3P24-201ENST00000433260 RRS1Q15050 365 aaKnown RBP7.94□□□□□ -1.14
HMGB3P24-201ENST00000433260 KIF7Q2M1P5 1343 aa7.94□□□□□ -1.14
HMGB3P24-201ENST00000433260 SPATA31A1Q5TZJ5 1347 aa7.94□□□□□ -1.14
HMGB3P24-201ENST00000433260 COL18A1P39060 1754 aa7.94□□□□□ -1.14
HMGB3P24-201ENST00000433260 KIF20BQ96Q89 1820 aa7.94□□□□□ -1.14
HMGB3P24-201ENST00000433260 NSD3Q9BZ95 1437 aa7.94□□□□□ -1.14
HMGB3P24-201ENST00000433260 PPM1GO15355 546 aaPredicted RBP7.93□□□□□ -1.14
HMGB3P24-201ENST00000433260 ONECUT3O60422 494 aaPredicted RBP7.93□□□□□ -1.14
HMGB3P24-201ENST00000433260 KRT27Q7Z3Y8 459 aa7.93□□□□□ -1.14
HMGB3P24-201ENST00000433260 BBXQ8WY36 941 aaPredicted RBP7.93□□□□□ -1.14
HMGB3P24-201ENST00000433260 UPF1Q92900 1129 aaKnown RBP eCLIP7.93□□□□□ -1.14
HMGB3P24-201ENST00000433260 AATKQ6ZMQ8 1374 aa7.93□□□□□ -1.14
HMGB3P24-201ENST00000433260 CDK12Q9NYV4 1490 aaPredicted RBP7.93□□□□□ -1.14
HMGB3P24-201ENST00000433260 LMO7Q8WWI1 1683 aa7.92□□□□□ -1.14
HMGB3P24-201ENST00000433260 CD44P16070 742 aaKnown RBP7.92□□□□□ -1.14
HMGB3P24-201ENST00000433260 ZNF467Q7Z7K2 595 aaPredicted RBP7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms