RNA–Protein interactions for RNA: ENST00000430858.1

HDAC6-207, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 618 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-207ENST00000430858 OVOS2Q6IE36 1432 aa13.65□□□□□ -0.22
HDAC6-207ENST00000430858 HSPA5P11021 654 aaKnown RBP13.65□□□□□ -0.22
HDAC6-207ENST00000430858 USP54Q70EL1 1684 aa13.65□□□□□ -0.22
HDAC6-207ENST00000430858 CRB1P82279 1406 aa13.64□□□□□ -0.23
HDAC6-207ENST00000430858 COG3Q96JB2 828 aa13.64□□□□□ -0.23
HDAC6-207ENST00000430858 ABCC6O95255 1503 aa13.64□□□□□ -0.23
HDAC6-207ENST00000430858 WDR17Q8IZU2 1322 aa13.64□□□□□ -0.23
HDAC6-207ENST00000430858 TOM1L2Q6ZVM7 507 aa13.63□□□□□ -0.23
HDAC6-207ENST00000430858 COL18A1P39060 1754 aa13.63□□□□□ -0.23
HDAC6-207ENST00000430858 THSD7AQ9UPZ6 1657 aa13.63□□□□□ -0.23
HDAC6-207ENST00000430858 CSB-PGBD3P0DP91 1061 aa13.62□□□□□ -0.23
HDAC6-207ENST00000430858 BLMP54132 1417 aaPredicted RBP13.62□□□□□ -0.23
HDAC6-207ENST00000430858 BRWD3Q6RI45 1802 aa13.62□□□□□ -0.23
HDAC6-207ENST00000430858 FYB1O15117 783 aa13.61□□□□□ -0.23
HDAC6-207ENST00000430858 PDE3BQ13370 1112 aa13.6□□□□□ -0.23
HDAC6-207ENST00000430858 SF3B2Q13435 895 aaKnown RBP13.6□□□□□ -0.23
HDAC6-207ENST00000430858 CARD10Q9BWT7 1032 aa13.6□□□□□ -0.23
HDAC6-207ENST00000430858 CARD14Q9BXL6 1004 aa13.6□□□□□ -0.23
HDAC6-207ENST00000430858 GGNBP2Q9H3C7 697 aa13.6□□□□□ -0.23
HDAC6-207ENST00000430858 POLR3GLQ9BT43 218 aa13.59□□□□□ -0.23
HDAC6-207ENST00000430858 CDCA7Q9BWT1 371 aaPredicted RBP13.59□□□□□ -0.23
HDAC6-207ENST00000430858 ERBB3P21860 1342 aa13.59□□□□□ -0.23
HDAC6-207ENST00000430858 NSD3Q9BZ95 1437 aa13.58□□□□□ -0.24
HDAC6-207ENST00000430858 FAM196AQ6ZSG2 479 aa13.58□□□□□ -0.24
HDAC6-207ENST00000430858 IP6K1Q92551 441 aa13.58□□□□□ -0.24
HDAC6-207ENST00000430858 CCDC7Q96M83 1385 aa13.58□□□□□ -0.24
HDAC6-207ENST00000430858 MYOM1P52179 1685 aa13.57□□□□□ -0.24
HDAC6-207ENST00000430858 FAM182BQ5T319 152 aa13.57□□□□□ -0.24
HDAC6-207ENST00000430858 MAP3K19Q56UN5 1328 aa13.57□□□□□ -0.24
HDAC6-207ENST00000430858 EP400Q96L91 3159 aa13.56□□□□□ -0.24
HDAC6-207ENST00000430858 C11orf95C9JLR9 678 aaPredicted RBP13.56□□□□□ -0.24
HDAC6-207ENST00000430858 AMPHP49418 695 aa13.56□□□□□ -0.24
HDAC6-207ENST00000430858 DDB1Q16531 1140 aa13.56□□□□□ -0.24
HDAC6-207ENST00000430858 ANKRD24Q8TF21 1146 aa13.56□□□□□ -0.24
HDAC6-207ENST00000430858 CGNL1Q0VF96 1302 aa13.56□□□□□ -0.24
HDAC6-207ENST00000430858 NLRP2Q9NX02 1062 aa13.55□□□□□ -0.24
HDAC6-207ENST00000430858 FBLN1P23142 703 aa13.54□□□□□ -0.24
HDAC6-207ENST00000430858 HOXC9P31274 260 aa13.54□□□□□ -0.24
HDAC6-207ENST00000430858 BAG6P46379 1132 aa13.54□□□□□ -0.24
HDAC6-207ENST00000430858 RTL1A6NKG5 1358 aa13.54□□□□□ -0.24
HDAC6-207ENST00000430858 PARP4Q9UKK3 1724 aaKnown RBP13.53□□□□□ -0.24
HDAC6-207ENST00000430858 LTN1O94822 1766 aa13.53□□□□□ -0.24
HDAC6-207ENST00000430858 RGPD5Q99666 1765 aa13.53□□□□□ -0.24
HDAC6-207ENST00000430858 RRS1Q15050 365 aaKnown RBP13.53□□□□□ -0.24
HDAC6-207ENST00000430858 DEFB132Q7Z7B7 95 aa13.53□□□□□ -0.24
HDAC6-207ENST00000430858 PANK3Q9H999 370 aa13.53□□□□□ -0.24
HDAC6-207ENST00000430858 DISP2A7MBM2 1401 aa13.53□□□□□ -0.24
HDAC6-207ENST00000430858 EXOC5O00471 708 aa13.52□□□□□ -0.25
HDAC6-207ENST00000430858 TRIM37O94972 964 aa13.52□□□□□ -0.25
HDAC6-207ENST00000430858 LTV1Q96GA3 475 aaPredicted RBP13.52□□□□□ -0.25
HDAC6-207ENST00000430858 KIF24Q5T7B8 1368 aa13.52□□□□□ -0.25
HDAC6-207ENST00000430858 KIF20BQ96Q89 1820 aa13.51□□□□□ -0.25
HDAC6-207ENST00000430858 OVOS2A0A0G2JMS6 1433 aa13.51□□□□□ -0.25
HDAC6-207ENST00000430858 IL2RBP14784 551 aa13.51□□□□□ -0.25
HDAC6-207ENST00000430858 LRRC37A3O60309 1634 aa13.5□□□□□ -0.25
HDAC6-207ENST00000430858 KIF7Q2M1P5 1343 aa13.5□□□□□ -0.25
HDAC6-207ENST00000430858 FLT4P35916 1363 aa13.49□□□□□ -0.25
HDAC6-207ENST00000430858 MARCH10Q8NA82 808 aaPredicted RBP13.49□□□□□ -0.25
HDAC6-207ENST00000430858 RGPD1P0DJD0 1748 aa13.49□□□□□ -0.25
HDAC6-207ENST00000430858 BCL9O00512 1426 aa13.48□□□□□ -0.25
HDAC6-207ENST00000430858 TNS2Q63HR2 1409 aa13.48□□□□□ -0.25
HDAC6-207ENST00000430858 SMG6Q86US8 1419 aaKnown RBP13.48□□□□□ -0.25
HDAC6-207ENST00000430858 NSD2O96028 1365 aa13.48□□□□□ -0.25
HDAC6-207ENST00000430858 INSRP06213 1382 aa13.48□□□□□ -0.25
HDAC6-207ENST00000430858 APBA3O96018 575 aa13.48□□□□□ -0.25
HDAC6-207ENST00000430858 EN1Q05925 392 aaPredicted RBP13.48□□□□□ -0.25
HDAC6-207ENST00000430858 WNK3Q9BYP7 1800 aa13.48□□□□□ -0.25
HDAC6-207ENST00000430858 HSP90AB2PQ58FF8 381 aa13.47□□□□□ -0.25
HDAC6-207ENST00000430858 KNSTRNQ9Y448 316 aa13.47□□□□□ -0.25
HDAC6-207ENST00000430858 EMILIN1Q9Y6C2 1016 aa13.47□□□□□ -0.25
HDAC6-207ENST00000430858 FAM208AQ9UK61 1670 aaKnown RBP13.47□□□□□ -0.25
HDAC6-207ENST00000430858 PARD3Q8TEW0 1356 aa13.45□□□□□ -0.26
HDAC6-207ENST00000430858 PEAK1Q9H792 1746 aa13.45□□□□□ -0.26
HDAC6-207ENST00000430858 PPM1GO15355 546 aaPredicted RBP13.45□□□□□ -0.26
HDAC6-207ENST00000430858 NBPF6Q5VWK0 638 aa13.45□□□□□ -0.26
HDAC6-207ENST00000430858 NBPF4Q96M43 638 aa13.45□□□□□ -0.26
HDAC6-207ENST00000430858 CAMKK2Q96RR4 588 aa13.45□□□□□ -0.26
HDAC6-207ENST00000430858 BCL11BQ9C0K0 894 aaPredicted RBP13.45□□□□□ -0.26
HDAC6-207ENST00000430858 POLKQ9UBT6 870 aa13.45□□□□□ -0.26
HDAC6-207ENST00000430858 TNS1Q9HBL0 1735 aaKnown RBP13.44□□□□□ -0.26
HDAC6-207ENST00000430858 WASHC2AQ641Q2 1341 aa13.44□□□□□ -0.26
HDAC6-207ENST00000430858 EZH2Q15910 746 aaKnown RBP13.44□□□□□ -0.26
HDAC6-207ENST00000430858 TNNT2P45379 298 aaPredicted RBP13.43□□□□□ -0.26
HDAC6-207ENST00000430858 MORC1Q86VD1 984 aa13.43□□□□□ -0.26
HDAC6-207ENST00000430858 PLSCR1O15162 318 aa13.42□□□□□ -0.26
HDAC6-207ENST00000430858 AMER1Q5JTC6 1135 aaPredicted RBP13.42□□□□□ -0.26
HDAC6-207ENST00000430858 RAPGEF4Q8WZA2 1011 aa13.42□□□□□ -0.26
HDAC6-207ENST00000430858 PER1O15534 1290 aaPredicted RBP13.41□□□□□ -0.26
HDAC6-207ENST00000430858 USHBP1Q8N6Y0 703 aa13.41□□□□□ -0.26
HDAC6-207ENST00000430858 ZCRB1Q8TBF4 217 aaKnown RBP13.41□□□□□ -0.26
HDAC6-207ENST00000430858 DDX54Q8TDD1 881 aaKnown RBP13.41□□□□□ -0.26
HDAC6-207ENST00000430858 ANKRD26Q9UPS8 1709 aa13.41□□□□□ -0.26
HDAC6-207ENST00000430858 MEGF6O75095 1541 aa13.4□□□□□ -0.26
HDAC6-207ENST00000430858 TATP17735 454 aaPredicted RBP13.4□□□□□ -0.26
HDAC6-207ENST00000430858 PTF1AQ7RTS3 328 aa13.39□□□□□ -0.27
HDAC6-207ENST00000430858 NCAPD2Q15021 1401 aa13.39□□□□□ -0.27
HDAC6-207ENST00000430858 KCNQ2O43526 872 aa13.38□□□□□ -0.27
HDAC6-207ENST00000430858 ACSBG1Q96GR2 724 aa13.38□□□□□ -0.27
HDAC6-207ENST00000430858 EYA1Q99502 592 aa13.38□□□□□ -0.27
HDAC6-207ENST00000430858 MAP2P11137 1827 aaKnown RBP13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms