RNA–Protein interactions for RNA: ENST00000430669.6

PTCH1-208, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,232 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-208ENST00000430669 EFCAB6Q5THR3 1501 aa14.05□□□□□ -0.16
PTCH1-208ENST00000430669 NUCB2P80303 420 aa14.05□□□□□ -0.16
PTCH1-208ENST00000430669 KIAA2012Q0VF49 1180 aa14.05□□□□□ -0.16
PTCH1-208ENST00000430669 AMOTL1Q8IY63 956 aa14.05□□□□□ -0.16
PTCH1-208ENST00000430669 SLC26A8Q96RN1 970 aa14.05□□□□□ -0.16
PTCH1-208ENST00000430669 NUTM2GQ5VZR2 741 aa14.05□□□□□ -0.16
PTCH1-208ENST00000430669 H3BQV1 296 aa14.04□□□□□ -0.16
PTCH1-208ENST00000430669 IFFO2Q5TF58 517 aa14.04□□□□□ -0.16
PTCH1-208ENST00000430669 POLR3AO14802 1390 aaPredicted RBP14.04□□□□□ -0.16
PTCH1-208ENST00000430669 WAPLQ7Z5K2 1190 aa14.04□□□□□ -0.16
PTCH1-208ENST00000430669 LNPKQ9C0E8 428 aa14.04□□□□□ -0.16
PTCH1-208ENST00000430669 MLH3Q9UHC1 1453 aa14.04□□□□□ -0.16
PTCH1-208ENST00000430669 CHMP5Q9NZZ3 219 aa14.04□□□□□ -0.16
PTCH1-208ENST00000430669 FRAT2O75474 233 aaPredicted RBP14.03□□□□□ -0.16
PTCH1-208ENST00000430669 NECTIN2Q92692 538 aa14.03□□□□□ -0.16
PTCH1-208ENST00000430669 YTHDC2Q9H6S0 1430 aaKnown RBP14.03□□□□□ -0.16
PTCH1-208ENST00000430669 G3V3G9 751 aa14.03□□□□□ -0.16
PTCH1-208ENST00000430669 DCAF8Q5TAQ9 597 aa14.03□□□□□ -0.16
PTCH1-208ENST00000430669 CPLX2Q6PUV4 134 aaKnown RBP14.03□□□□□ -0.16
PTCH1-208ENST00000430669 CLASP1Q7Z460 1538 aa14.03□□□□□ -0.16
PTCH1-208ENST00000430669 HDGFL1Q5TGJ6 251 aa14.03□□□□□ -0.16
PTCH1-208ENST00000430669 PTPRCP08575 1304 aa14.03□□□□□ -0.16
PTCH1-208ENST00000430669 FAM184AQ8NB25 1140 aa14.03□□□□□ -0.16
PTCH1-208ENST00000430669 PSMA5P28066 241 aa14.02□□□□□ -0.16
PTCH1-208ENST00000430669 CLASRPQ8N2M8 674 aaKnown RBP14.02□□□□□ -0.16
PTCH1-208ENST00000430669 NOL10Q9BSC4 688 aaKnown RBP14.02□□□□□ -0.16
PTCH1-208ENST00000430669 RRS1Q15050 365 aaKnown RBP14.02□□□□□ -0.16
PTCH1-208ENST00000430669 CCDC27Q2M243 656 aa14.02□□□□□ -0.17
PTCH1-208ENST00000430669 CCDC184Q52MB2 194 aa14.02□□□□□ -0.17
PTCH1-208ENST00000430669 FBXO31Q5XUX0 539 aaPredicted RBP14.02□□□□□ -0.17
PTCH1-208ENST00000430669 MEX3CQ5U5Q3 659 aaKnown RBP14.02□□□□□ -0.17
PTCH1-208ENST00000430669 AMOTL2Q9Y2J4 779 aa14.02□□□□□ -0.17
PTCH1-208ENST00000430669 CLTCL1P53675 1640 aa14.01□□□□□ -0.17
PTCH1-208ENST00000430669 SYNE3Q6ZMZ3 975 aa14.01□□□□□ -0.17
PTCH1-208ENST00000430669 TSR2Q969E8 191 aaKnown RBP14.01□□□□□ -0.17
PTCH1-208ENST00000430669 SLC4A2P04920 1241 aa14.01□□□□□ -0.17
PTCH1-208ENST00000430669 ITSN1Q15811 1721 aa14.01□□□□□ -0.17
PTCH1-208ENST00000430669 BCAR3O75815 825 aa14.01□□□□□ -0.17
PTCH1-208ENST00000430669 BTBD11A6QL63 1104 aa14.01□□□□□ -0.17
PTCH1-208ENST00000430669 ZNF530Q6P9A1 599 aaPredicted RBP14□□□□□ -0.17
PTCH1-208ENST00000430669 TRDNQ13061 729 aa14□□□□□ -0.17
PTCH1-208ENST00000430669 RNF17Q9BXT8 1623 aaKnown RBP14□□□□□ -0.17
PTCH1-208ENST00000430669 ZSCAN21Q9Y5A6 473 aaPredicted RBP14□□□□□ -0.17
PTCH1-208ENST00000430669 NAP1L5Q96NT1 182 aaPredicted RBP13.99□□□□□ -0.17
PTCH1-208ENST00000430669 LRRCC1Q9C099 1032 aa13.99□□□□□ -0.17
PTCH1-208ENST00000430669 ANO2Q9NQ90 1003 aa13.99□□□□□ -0.17
PTCH1-208ENST00000430669 VPS37DQ86XT2 251 aa13.99□□□□□ -0.17
PTCH1-208ENST00000430669 AMER1Q5JTC6 1135 aaPredicted RBP13.99□□□□□ -0.17
PTCH1-208ENST00000430669 CABP4P57796 275 aa13.99□□□□□ -0.17
PTCH1-208ENST00000430669 RABEP1Q15276 862 aa13.99□□□□□ -0.17
PTCH1-208ENST00000430669 ZMYM3Q14202 1370 aa13.98□□□□□ -0.17
PTCH1-208ENST00000430669 SYTL4Q96C24 671 aaPredicted RBP13.98□□□□□ -0.17
PTCH1-208ENST00000430669 AKAP17AQ02040 695 aaKnown RBP13.98□□□□□ -0.17
PTCH1-208ENST00000430669 GZF1Q9H116 711 aaPredicted RBP13.98□□□□□ -0.17
PTCH1-208ENST00000430669 TAOK2Q9UL54 1235 aa13.98□□□□□ -0.17
PTCH1-208ENST00000430669 CLTCQ00610 1675 aaKnown RBP13.98□□□□□ -0.17
PTCH1-208ENST00000430669 RARSP54136 660 aaKnown RBP13.97□□□□□ -0.17
PTCH1-208ENST00000430669 NPATQ14207 1427 aa13.97□□□□□ -0.17
PTCH1-208ENST00000430669 CHD1LQ86WJ1 897 aa13.97□□□□□ -0.17
PTCH1-208ENST00000430669 SETBP1Q9Y6X0 1596 aa13.97□□□□□ -0.17
PTCH1-208ENST00000430669 GSE1Q14687 1217 aa13.97□□□□□ -0.17
PTCH1-208ENST00000430669 EDC4Q6P2E9 1401 aaKnown RBP13.97□□□□□ -0.17
PTCH1-208ENST00000430669 PDIA4P13667 645 aaKnown RBP13.97□□□□□ -0.17
PTCH1-208ENST00000430669 PDZRN3Q9UPQ7 1066 aa13.97□□□□□ -0.17
PTCH1-208ENST00000430669 TESK2Q96S53 571 aa13.97□□□□□ -0.17
PTCH1-208ENST00000430669 RPAP2Q8IXW5 612 aaPredicted RBP13.96□□□□□ -0.17
PTCH1-208ENST00000430669 BACH2Q9BYV9 841 aa13.96□□□□□ -0.17
PTCH1-208ENST00000430669 AEBP2Q6ZN18 517 aaPredicted RBP13.96□□□□□ -0.17
PTCH1-208ENST00000430669 IL27Q8NEV9 243 aa13.96□□□□□ -0.17
PTCH1-208ENST00000430669 RAB11FIP3O75154 756 aa13.96□□□□□ -0.17
PTCH1-208ENST00000430669 TAF7Q15545 349 aaPredicted RBP13.96□□□□□ -0.18
PTCH1-208ENST00000430669 DUSP27Q5VZP5 1158 aa13.96□□□□□ -0.18
PTCH1-208ENST00000430669 HOOK1Q9UJC3 728 aaKnown RBP13.96□□□□□ -0.18
PTCH1-208ENST00000430669 TRIM29Q14134 588 aa13.95□□□□□ -0.18
PTCH1-208ENST00000430669 SF3A1Q15459 793 aaKnown RBP13.95□□□□□ -0.18
PTCH1-208ENST00000430669 SBNO2Q9Y2G9 1366 aa13.95□□□□□ -0.18
PTCH1-208ENST00000430669 MADDQ8WXG6 1647 aa13.95□□□□□ -0.18
PTCH1-208ENST00000430669 TOM1L2Q6ZVM7 507 aa13.95□□□□□ -0.18
PTCH1-208ENST00000430669 MAP2P11137 1827 aaKnown RBP13.95□□□□□ -0.18
PTCH1-208ENST00000430669 AIMP1Q12904 312 aaKnown RBP13.95□□□□□ -0.18
PTCH1-208ENST00000430669 ISY1Q9ULR0 285 aaKnown RBP13.95□□□□□ -0.18
PTCH1-208ENST00000430669 KIF20BQ96Q89 1820 aa13.95□□□□□ -0.18
PTCH1-208ENST00000430669 ERICH2A1L162 156 aa13.94□□□□□ -0.18
PTCH1-208ENST00000430669 DDX49Q9Y6V7 483 aaKnown RBP13.94□□□□□ -0.18
PTCH1-208ENST00000430669 DMRT2Q9Y5R5 561 aa13.94□□□□□ -0.18
PTCH1-208ENST00000430669 SPATA31E1Q6ZUB1 1445 aa13.94□□□□□ -0.18
PTCH1-208ENST00000430669 BLMP54132 1417 aaPredicted RBP13.94□□□□□ -0.18
PTCH1-208ENST00000430669 PHF8Q9UPP1 1060 aa13.94□□□□□ -0.18
PTCH1-208ENST00000430669 ABCC3O15438 1527 aa13.94□□□□□ -0.18
PTCH1-208ENST00000430669 SURF6O75683 361 aaKnown RBP13.94□□□□□ -0.18
PTCH1-208ENST00000430669 INO80Q9ULG1 1556 aaPredicted RBP13.94□□□□□ -0.18
PTCH1-208ENST00000430669 PDCP20941 246 aa13.93□□□□□ -0.18
PTCH1-208ENST00000430669 ANKRD1Q15327 319 aa13.93□□□□□ -0.18
PTCH1-208ENST00000430669 CWC22Q9HCG8 908 aaKnown RBP13.93□□□□□ -0.18
PTCH1-208ENST00000430669 GLI2P10070 1586 aa13.93□□□□□ -0.18
PTCH1-208ENST00000430669 BCORL1Q5H9F3 1711 aa13.93□□□□□ -0.18
PTCH1-208ENST00000430669 NOL8Q76FK4 1167 aaKnown RBP13.93□□□□□ -0.18
PTCH1-208ENST00000430669 SMC3Q9UQE7 1217 aa13.93□□□□□ -0.18
PTCH1-208ENST00000430669 MSH6P52701 1360 aa13.93□□□□□ -0.18
PTCH1-208ENST00000430669 NME9Q86XW9 330 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms