RNA–Protein interactions for RNA: ENST00000430547.5

NUP50-208, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 537 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-208ENST00000430547 RGPD1P0DJD0 1748 aa24.64■■□□□ 1.53
NUP50-208ENST00000430547 NME9Q86XW9 330 aa24.63■■□□□ 1.53
NUP50-208ENST00000430547 USP31Q70CQ4 1352 aa24.63■■□□□ 1.53
NUP50-208ENST00000430547 ARHGEF25Q86VW2 580 aa24.62■■□□□ 1.53
NUP50-208ENST00000430547 THRAP3Q9Y2W1 955 aaKnown RBP24.62■■□□□ 1.53
NUP50-208ENST00000430547 CDCA8Q53HL2 280 aa24.6■■□□□ 1.53
NUP50-208ENST00000430547 TOM1L2Q6ZVM7 507 aa24.6■■□□□ 1.53
NUP50-208ENST00000430547 ZRANB1Q9UGI0 708 aa24.6■■□□□ 1.53
NUP50-208ENST00000430547 PARP4Q9UKK3 1724 aaKnown RBP24.6■■□□□ 1.53
NUP50-208ENST00000430547 ABCC6O95255 1503 aa24.6■■□□□ 1.53
NUP50-208ENST00000430547 WNK3Q9BYP7 1800 aa24.59■■□□□ 1.53
NUP50-208ENST00000430547 FAM182BQ5T319 152 aa24.59■■□□□ 1.53
NUP50-208ENST00000430547 PDE3BQ13370 1112 aa24.58■■□□□ 1.53
NUP50-208ENST00000430547 CSB-PGBD3P0DP91 1061 aa24.57■■□□□ 1.52
NUP50-208ENST00000430547 AXIN2Q9Y2T1 843 aa24.57■■□□□ 1.52
NUP50-208ENST00000430547 WDR17Q8IZU2 1322 aa24.57■■□□□ 1.52
NUP50-208ENST00000430547 ANKRD36BQ8N2N9 1353 aa24.56■■□□□ 1.52
NUP50-208ENST00000430547 DEFB132Q7Z7B7 95 aa24.56■■□□□ 1.52
NUP50-208ENST00000430547 BAG6P46379 1132 aa24.55■■□□□ 1.52
NUP50-208ENST00000430547 OVOS2A0A0J9YW53 1432 aa24.54■■□□□ 1.52
NUP50-208ENST00000430547 OVOS2Q6IE36 1432 aa24.54■■□□□ 1.52
NUP50-208ENST00000430547 FAM196AQ6ZSG2 479 aa24.54■■□□□ 1.52
NUP50-208ENST00000430547 TNS1Q9HBL0 1735 aaKnown RBP24.54■■□□□ 1.52
NUP50-208ENST00000430547 LRRC37A3O60309 1634 aa24.52■■□□□ 1.52
NUP50-208ENST00000430547 MYOM1P52179 1685 aa24.51■■□□□ 1.51
NUP50-208ENST00000430547 COG3Q96JB2 828 aa24.51■■□□□ 1.51
NUP50-208ENST00000430547 KIF20BQ96Q89 1820 aa24.51■■□□□ 1.51
NUP50-208ENST00000430547 CDCA7Q9BWT1 371 aaPredicted RBP24.48■■□□□ 1.51
NUP50-208ENST00000430547 CARD10Q9BWT7 1032 aa24.48■■□□□ 1.51
NUP50-208ENST00000430547 DDB1Q16531 1140 aa24.47■■□□□ 1.51
NUP50-208ENST00000430547 CCDC7Q96M83 1385 aa24.46■■□□□ 1.51
NUP50-208ENST00000430547 TRIM37O94972 964 aa24.46■■□□□ 1.51
NUP50-208ENST00000430547 ERBB3P21860 1342 aa24.45■■□□□ 1.5
NUP50-208ENST00000430547 C11orf95C9JLR9 678 aaPredicted RBP24.45■■□□□ 1.5
NUP50-208ENST00000430547 OVOS2A0A0G2JMS6 1433 aa24.44■■□□□ 1.5
NUP50-208ENST00000430547 FAM208AQ9UK61 1670 aaKnown RBP24.44■■□□□ 1.5
NUP50-208ENST00000430547 EIF4G2P78344 907 aaKnown RBP eCLIP24.44■■□□□ 1.5
NUP50-208ENST00000430547 EN1Q05925 392 aaPredicted RBP24.43■■□□□ 1.5
NUP50-208ENST00000430547 NLRP2Q9NX02 1062 aa24.43■■□□□ 1.5
NUP50-208ENST00000430547 DISP2A7MBM2 1401 aa24.43■■□□□ 1.5
NUP50-208ENST00000430547 PEAK1Q9H792 1746 aa24.42■■□□□ 1.5
NUP50-208ENST00000430547 ANKRD24Q8TF21 1146 aa24.42■■□□□ 1.5
NUP50-208ENST00000430547 SBF2Q86WG5 1849 aa24.42■■□□□ 1.5
NUP50-208ENST00000430547 POLR3GLQ9BT43 218 aa24.41■■□□□ 1.5
NUP50-208ENST00000430547 APBA3O96018 575 aa24.4■■□□□ 1.5
NUP50-208ENST00000430547 GGNBP2Q9H3C7 697 aa24.4■■□□□ 1.5
NUP50-208ENST00000430547 FYB1O15117 783 aa24.39■■□□□ 1.49
NUP50-208ENST00000430547 AMPHP49418 695 aa24.39■■□□□ 1.49
NUP50-208ENST00000430547 IP6K1Q92551 441 aa24.39■■□□□ 1.49
NUP50-208ENST00000430547 NSD3Q9BZ95 1437 aa24.38■■□□□ 1.49
NUP50-208ENST00000430547 MAP3K19Q56UN5 1328 aa24.37■■□□□ 1.49
NUP50-208ENST00000430547 EXOC5O00471 708 aa24.37■■□□□ 1.49
NUP50-208ENST00000430547 HSPA5P11021 654 aaKnown RBP24.37■■□□□ 1.49
NUP50-208ENST00000430547 LTV1Q96GA3 475 aaPredicted RBP24.36■■□□□ 1.49
NUP50-208ENST00000430547 TNS2Q63HR2 1409 aa24.35■■□□□ 1.49
NUP50-208ENST00000430547 PARD3Q8TEW0 1356 aa24.35■■□□□ 1.49
NUP50-208ENST00000430547 EZH2Q15910 746 aaKnown RBP24.35■■□□□ 1.49
NUP50-208ENST00000430547 RTL1A6NKG5 1358 aa24.34■■□□□ 1.49
NUP50-208ENST00000430547 HOXC9P31274 260 aa24.34■■□□□ 1.49
NUP50-208ENST00000430547 RREB1Q92766 1687 aa24.34■■□□□ 1.49
NUP50-208ENST00000430547 IL2RBP14784 551 aa24.33■■□□□ 1.49
NUP50-208ENST00000430547 FBLN1P23142 703 aa24.33■■□□□ 1.49
NUP50-208ENST00000430547 MARCH10Q8NA82 808 aaPredicted RBP24.33■■□□□ 1.49
NUP50-208ENST00000430547 RGPD2P0DJD1 1756 aa24.33■■□□□ 1.49
NUP50-208ENST00000430547 RRS1Q15050 365 aaKnown RBP24.32■■□□□ 1.48
NUP50-208ENST00000430547 CAMKK2Q96RR4 588 aa24.32■■□□□ 1.48
NUP50-208ENST00000430547 CARD14Q9BXL6 1004 aa24.32■■□□□ 1.48
NUP50-208ENST00000430547 RGPD3A6NKT7 1758 aaPredicted RBP24.31■■□□□ 1.48
NUP50-208ENST00000430547 RGPD4Q7Z3J3 1758 aa24.31■■□□□ 1.48
NUP50-208ENST00000430547 SMG6Q86US8 1419 aaKnown RBP24.3■■□□□ 1.48
NUP50-208ENST00000430547 CGNL1Q0VF96 1302 aa24.3■■□□□ 1.48
NUP50-208ENST00000430547 NUP188Q5SRE5 1749 aa24.3■■□□□ 1.48
NUP50-208ENST00000430547 BCL9O00512 1426 aa24.29■■□□□ 1.48
NUP50-208ENST00000430547 KAT6BQ8WYB5 2073 aa24.29■■□□□ 1.48
NUP50-208ENST00000430547 ANKRD26Q9UPS8 1709 aa24.29■■□□□ 1.48
NUP50-208ENST00000430547 PSDA5PKW4 1024 aaPredicted RBP24.28■■□□□ 1.48
NUP50-208ENST00000430547 BCL11BQ9C0K0 894 aaPredicted RBP24.27■■□□□ 1.48
NUP50-208ENST00000430547 FLT4P35916 1363 aa24.26■■□□□ 1.47
NUP50-208ENST00000430547 MAP2P11137 1827 aaKnown RBP24.26■■□□□ 1.47
NUP50-208ENST00000430547 KIF24Q5T7B8 1368 aa24.25■■□□□ 1.47
NUP50-208ENST00000430547 NHSQ6T4R5 1651 aa24.24■■□□□ 1.47
NUP50-208ENST00000430547 R3HDM1Q15032 1099 aaKnown RBP24.23■■□□□ 1.47
NUP50-208ENST00000430547 INSRP06213 1382 aa24.22■■□□□ 1.47
NUP50-208ENST00000430547 NBPF14Q5TI25 921 aa24.22■■□□□ 1.47
NUP50-208ENST00000430547 PLSCR1O15162 318 aa24.21■■□□□ 1.47
NUP50-208ENST00000430547 SRCAPQ6ZRS2 3230 aa24.21■■□□□ 1.47
NUP50-208ENST00000430547 LRP5O75197 1615 aa24.21■■□□□ 1.47
NUP50-208ENST00000430547 PPM1GO15355 546 aaPredicted RBP24.19■■□□□ 1.46
NUP50-208ENST00000430547 HSP90AB2PQ58FF8 381 aa24.19■■□□□ 1.46
NUP50-208ENST00000430547 PTF1AQ7RTS3 328 aa24.19■■□□□ 1.46
NUP50-208ENST00000430547 PANK3Q9H999 370 aa24.19■■□□□ 1.46
NUP50-208ENST00000430547 DDX54Q8TDD1 881 aaKnown RBP24.18■■□□□ 1.46
NUP50-208ENST00000430547 ACSBG1Q96GR2 724 aa24.18■■□□□ 1.46
NUP50-208ENST00000430547 EMILIN1Q9Y6C2 1016 aa24.18■■□□□ 1.46
NUP50-208ENST00000430547 BTAF1O14981 1849 aa24.17■■□□□ 1.46
NUP50-208ENST00000430547 NBPF6Q5VWK0 638 aa24.17■■□□□ 1.46
NUP50-208ENST00000430547 NBPF4Q96M43 638 aa24.17■■□□□ 1.46
NUP50-208ENST00000430547 SHANK3Q9BYB0 1731 aa24.17■■□□□ 1.46
NUP50-208ENST00000430547 MEGF6O75095 1541 aa24.16■■□□□ 1.46
NUP50-208ENST00000430547 USHBP1Q8N6Y0 703 aa24.16■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms