RNA–Protein interactions for RNA: ENST00000428774.1

CRIM1-204, Transcript of cysteine rich transmembrane BMP regulator 1, humanhuman

TSL 3

Gene CRIM1, Length 700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRIM1-204ENST00000428774 NUTM2EB1AL46 878 aaPredicted RBP14.51□□□□□ -0.09
CRIM1-204ENST00000428774 PPM1GO15355 546 aaPredicted RBP14.51□□□□□ -0.09
CRIM1-204ENST00000428774 WDR43Q15061 677 aaKnown RBP eCLIP14.51□□□□□ -0.09
CRIM1-204ENST00000428774 NUTM2AQ8IVF1 878 aaPredicted RBP14.51□□□□□ -0.09
CRIM1-204ENST00000428774 FAM208AQ9UK61 1670 aaKnown RBP14.5□□□□□ -0.09
CRIM1-204ENST00000428774 KCNH5Q8NCM2 988 aa14.5□□□□□ -0.09
CRIM1-204ENST00000428774 ADAMTS8Q9UP79 889 aa14.5□□□□□ -0.09
CRIM1-204ENST00000428774 PLCH1Q4KWH8 1693 aa14.49□□□□□ -0.09
CRIM1-204ENST00000428774 DIAPH1O60610 1272 aaKnown RBP14.48□□□□□ -0.09
CRIM1-204ENST00000428774 GCP02774 474 aa14.48□□□□□ -0.09
CRIM1-204ENST00000428774 HNRNPUQ00839 825 aaKnown RBP eCLIP14.48□□□□□ -0.09
CRIM1-204ENST00000428774 HOXC9P31274 260 aa14.47□□□□□ -0.09
CRIM1-204ENST00000428774 IL13P35225 146 aa14.47□□□□□ -0.09
CRIM1-204ENST00000428774 ADAMTS2O95450 1211 aa14.46□□□□□ -0.09
CRIM1-204ENST00000428774 AMPHP49418 695 aa14.46□□□□□ -0.09
CRIM1-204ENST00000428774 EIF4A2Q14240 407 aaKnown RBP14.46□□□□□ -0.09
CRIM1-204ENST00000428774 HSP90AB2PQ58FF8 381 aa14.46□□□□□ -0.09
CRIM1-204ENST00000428774 CPDO75976 1380 aa14.46□□□□□ -0.1
CRIM1-204ENST00000428774 SPATA31A6Q5VVP1 1343 aa14.45□□□□□ -0.1
CRIM1-204ENST00000428774 U2SURPO15042 1029 aaKnown RBP14.45□□□□□ -0.1
CRIM1-204ENST00000428774 ARHGEF25Q86VW2 580 aa14.45□□□□□ -0.1
CRIM1-204ENST00000428774 CCDC146Q8IYE0 955 aa14.45□□□□□ -0.1
CRIM1-204ENST00000428774 DLG5Q8TDM6 1919 aa14.45□□□□□ -0.1
CRIM1-204ENST00000428774 COL14A1Q05707 1796 aaKnown RBP14.45□□□□□ -0.1
CRIM1-204ENST00000428774 NRAPQ86VF7 1730 aa14.44□□□□□ -0.1
CRIM1-204ENST00000428774 SENP3-EIF4A1A0A087X0R7 540 aa14.44□□□□□ -0.1
CRIM1-204ENST00000428774 ZBTB7CA1YPR0 619 aa14.44□□□□□ -0.1
CRIM1-204ENST00000428774 U2AF1L5P0DN76 240 aaPredicted RBP14.44□□□□□ -0.1
CRIM1-204ENST00000428774 U2AF1Q01081 240 aaKnown RBP eCLIP14.44□□□□□ -0.1
CRIM1-204ENST00000428774 NUDCQ9Y266 331 aa14.44□□□□□ -0.1
CRIM1-204ENST00000428774 ZBED9Q6R2W3 1325 aa14.43□□□□□ -0.1
CRIM1-204ENST00000428774 HAP1P54257 671 aaPredicted RBP14.43□□□□□ -0.1
CRIM1-204ENST00000428774 ZC3H6P61129 1189 aaKnown RBP14.43□□□□□ -0.1
CRIM1-204ENST00000428774 IP6K1Q92551 441 aa14.43□□□□□ -0.1
CRIM1-204ENST00000428774 KIAA0232Q92628 1395 aa14.43□□□□□ -0.1
CRIM1-204ENST00000428774 NCAPD2Q15021 1401 aa14.42□□□□□ -0.1
CRIM1-204ENST00000428774 CHRNA2Q15822 529 aa14.42□□□□□ -0.1
CRIM1-204ENST00000428774 IGSF1Q8N6C5 1336 aa14.41□□□□□ -0.1
CRIM1-204ENST00000428774 RSPH6AQ9H0K4 717 aa14.41□□□□□ -0.1
CRIM1-204ENST00000428774 WNK3Q9BYP7 1800 aa14.41□□□□□ -0.1
CRIM1-204ENST00000428774 NWD2Q9ULI1 1742 aa14.41□□□□□ -0.1
CRIM1-204ENST00000428774 KDRP35968 1356 aa14.4□□□□□ -0.1
CRIM1-204ENST00000428774 C8orf37Q96NL8 207 aa14.4□□□□□ -0.1
CRIM1-204ENST00000428774 PLEKHF1Q96S99 279 aa14.4□□□□□ -0.1
CRIM1-204ENST00000428774 COL5A2P05997 1499 aaPredicted RBP14.39□□□□□ -0.11
CRIM1-204ENST00000428774 FAM83GA6ND36 823 aa14.39□□□□□ -0.11
CRIM1-204ENST00000428774 HMOX1P09601 288 aa14.39□□□□□ -0.11
CRIM1-204ENST00000428774 MEX3CQ5U5Q3 659 aaKnown RBP14.39□□□□□ -0.11
CRIM1-204ENST00000428774 AEBP1Q8IUX7 1158 aa14.39□□□□□ -0.11
CRIM1-204ENST00000428774 RUNDC1Q96C34 613 aa14.39□□□□□ -0.11
CRIM1-204ENST00000428774 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.38□□□□□ -0.11
CRIM1-204ENST00000428774 PRKAR2BP31323 418 aa14.38□□□□□ -0.11
CRIM1-204ENST00000428774 LTV1Q96GA3 475 aaPredicted RBP14.38□□□□□ -0.11
CRIM1-204ENST00000428774 AXIN2Q9Y2T1 843 aa14.38□□□□□ -0.11
CRIM1-204ENST00000428774 ERBB3P21860 1342 aa14.38□□□□□ -0.11
CRIM1-204ENST00000428774 SLIT2O94813 1529 aa14.37□□□□□ -0.11
CRIM1-204ENST00000428774 APAF1O14727 1248 aa14.37□□□□□ -0.11
CRIM1-204ENST00000428774 EYA1Q99502 592 aa14.37□□□□□ -0.11
CRIM1-204ENST00000428774 PRDM11Q9NQV5 511 aa14.37□□□□□ -0.11
CRIM1-204ENST00000428774 PARP4Q9UKK3 1724 aaKnown RBP14.37□□□□□ -0.11
CRIM1-204ENST00000428774 VIRMAQ69YN4 1812 aaKnown RBP14.36□□□□□ -0.11
CRIM1-204ENST00000428774 PKD1L3Q7Z443 1732 aa14.36□□□□□ -0.11
CRIM1-204ENST00000428774 FCHSD2O94868 740 aa14.36□□□□□ -0.11
CRIM1-204ENST00000428774 CENPBP07199 599 aaPredicted RBP14.36□□□□□ -0.11
CRIM1-204ENST00000428774 ANKRD24Q8TF21 1146 aa14.36□□□□□ -0.11
CRIM1-204ENST00000428774 LRRC37A3O60309 1634 aa14.36□□□□□ -0.11
CRIM1-204ENST00000428774 AFF2P51816 1311 aa14.36□□□□□ -0.11
CRIM1-204ENST00000428774 SULT6B1Q6IMI4 303 aa14.35□□□□□ -0.11
CRIM1-204ENST00000428774 TCP11L2Q8N4U5 519 aa14.35□□□□□ -0.11
CRIM1-204ENST00000428774 SALL2Q9Y467 1007 aaPredicted RBP14.35□□□□□ -0.11
CRIM1-204ENST00000428774 BCL9LQ86UU0 1499 aa14.35□□□□□ -0.11
CRIM1-204ENST00000428774 ZNF521Q96K83 1311 aa14.35□□□□□ -0.11
CRIM1-204ENST00000428774 MAPK8IP3Q9UPT6 1336 aa14.35□□□□□ -0.11
CRIM1-204ENST00000428774 USHBP1Q8N6Y0 703 aa14.34□□□□□ -0.11
CRIM1-204ENST00000428774 NGLY1Q96IV0 654 aa14.34□□□□□ -0.11
CRIM1-204ENST00000428774 RGS17Q9UGC6 210 aaPredicted RBP14.34□□□□□ -0.11
CRIM1-204ENST00000428774 RRP7AQ9Y3A4 280 aaKnown RBP14.34□□□□□ -0.11
CRIM1-204ENST00000428774 SHANK3Q9BYB0 1731 aa14.34□□□□□ -0.11
CRIM1-204ENST00000428774 NBPF6Q5VWK0 638 aa14.33□□□□□ -0.12
CRIM1-204ENST00000428774 NBPF4Q96M43 638 aa14.33□□□□□ -0.12
CRIM1-204ENST00000428774 BTG4Q9NY30 223 aa14.33□□□□□ -0.12
CRIM1-204ENST00000428774 PHACTR3Q96KR7 559 aa14.32□□□□□ -0.12
CRIM1-204ENST00000428774 PNNQ9H307 717 aaKnown RBP14.32□□□□□ -0.12
CRIM1-204ENST00000428774 MEGF6O75095 1541 aa14.31□□□□□ -0.12
CRIM1-204ENST00000428774 GLI3P10071 1580 aa14.31□□□□□ -0.12
CRIM1-204ENST00000428774 TMPOP42166 694 aaKnown RBP14.31□□□□□ -0.12
CRIM1-204ENST00000428774 FNBP4Q8N3X1 1017 aaPredicted RBP14.31□□□□□ -0.12
CRIM1-204ENST00000428774 PHF23Q9BUL5 403 aaPredicted RBP14.3□□□□□ -0.12
CRIM1-204ENST00000428774 STRN4Q9NRL3 753 aa14.3□□□□□ -0.12
CRIM1-204ENST00000428774 USP21Q9UK80 565 aa14.3□□□□□ -0.12
CRIM1-204ENST00000428774 NEUROD2Q15784 382 aa14.29□□□□□ -0.12
CRIM1-204ENST00000428774 NFE2L2Q16236 605 aa14.29□□□□□ -0.12
CRIM1-204ENST00000428774 NGEFQ8N5V2 710 aa14.29□□□□□ -0.12
CRIM1-204ENST00000428774 WDR17Q8IZU2 1322 aa14.29□□□□□ -0.12
CRIM1-204ENST00000428774 ATRNO75882 1429 aa14.29□□□□□ -0.12
CRIM1-204ENST00000428774 ADAMTS7Q9UKP4 1686 aa14.29□□□□□ -0.12
CRIM1-204ENST00000428774 NEFMP07197 916 aa14.28□□□□□ -0.12
CRIM1-204ENST00000428774 CCDC27Q2M243 656 aa14.28□□□□□ -0.12
CRIM1-204ENST00000428774 NCBP3Q53F19 620 aaKnown RBP14.28□□□□□ -0.12
CRIM1-204ENST00000428774 LARP1Q6PKG0 1096 aaKnown RBP14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms