RNA–Protein interactions for RNA: ENST00000428154.5

PMPCB-202, Transcript of peptidase, mitochondrial processing beta subunit, humanhuman

TSL 1 (best) BASIC

Gene PMPCB, Length 1,714 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCB-202ENST00000428154 TNNQ9UQP3 1299 aa25.6■■□□□ 1.69
PMPCB-202ENST00000428154 NOB1Q9ULX3 412 aaKnown RBP25.58■■□□□ 1.69
PMPCB-202ENST00000428154 TBX22Q9Y458 520 aa25.58■■□□□ 1.69
PMPCB-202ENST00000428154 PTCH1Q13635 1447 aa25.58■■□□□ 1.69
PMPCB-202ENST00000428154 TTC21BQ7Z4L5 1316 aa25.57■■□□□ 1.68
PMPCB-202ENST00000428154 PDZRN3Q9UPQ7 1066 aa25.57■■□□□ 1.68
PMPCB-202ENST00000428154 NALCNQ8IZF0 1738 aa25.56■■□□□ 1.68
PMPCB-202ENST00000428154 OVOS2A0A0J9YW53 1432 aa25.56■■□□□ 1.68
PMPCB-202ENST00000428154 OVOS2Q6IE36 1432 aa25.56■■□□□ 1.68
PMPCB-202ENST00000428154 ZNF853P0CG23 659 aa25.56■■□□□ 1.68
PMPCB-202ENST00000428154 LTKP29376 864 aa25.55■■□□□ 1.68
PMPCB-202ENST00000428154 NBR1Q14596 966 aa25.55■■□□□ 1.68
PMPCB-202ENST00000428154 USP6P35125 1406 aa25.55■■□□□ 1.68
PMPCB-202ENST00000428154 HAP1P54257 671 aaPredicted RBP25.54■■□□□ 1.68
PMPCB-202ENST00000428154 ITPRIPQ8IWB1 547 aa25.54■■□□□ 1.68
PMPCB-202ENST00000428154 PHACTR3Q96KR7 559 aa25.54■■□□□ 1.68
PMPCB-202ENST00000428154 HMOX1P09601 288 aa25.54■■□□□ 1.68
PMPCB-202ENST00000428154 TTC21AQ8NDW8 1320 aa25.53■■□□□ 1.68
PMPCB-202ENST00000428154 USP31Q70CQ4 1352 aa25.53■■□□□ 1.68
PMPCB-202ENST00000428154 DLG5Q8TDM6 1919 aa25.53■■□□□ 1.68
PMPCB-202ENST00000428154 CFAP44Q96MT7 982 aa25.53■■□□□ 1.68
PMPCB-202ENST00000428154 ACEP12821 1306 aa25.52■■□□□ 1.68
PMPCB-202ENST00000428154 PIK3R4Q99570 1358 aa25.52■■□□□ 1.68
PMPCB-202ENST00000428154 UPF2Q9HAU5 1272 aaKnown RBP25.51■■□□□ 1.68
PMPCB-202ENST00000428154 ZBTB40Q9NUA8 1239 aa25.51■■□□□ 1.68
PMPCB-202ENST00000428154 FER1L4A9Z1Z3 1794 aa25.51■■□□□ 1.67
PMPCB-202ENST00000428154 RIMS1Q86UR5 1692 aaKnown RBP25.51■■□□□ 1.67
PMPCB-202ENST00000428154 VAMP4O75379 141 aa25.51■■□□□ 1.67
PMPCB-202ENST00000428154 FBLN1P23142 703 aa25.51■■□□□ 1.67
PMPCB-202ENST00000428154 THEMISQ8N1K5 641 aaPredicted RBP25.51■■□□□ 1.67
PMPCB-202ENST00000428154 SSH2Q76I76 1423 aa25.5■■□□□ 1.67
PMPCB-202ENST00000428154 SMC5Q8IY18 1101 aa25.5■■□□□ 1.67
PMPCB-202ENST00000428154 ZRANB1Q9UGI0 708 aa25.5■■□□□ 1.67
PMPCB-202ENST00000428154 TMEM57Q8N5G2 664 aa25.49■■□□□ 1.67
PMPCB-202ENST00000428154 PTPRUQ92729 1446 aa25.49■■□□□ 1.67
PMPCB-202ENST00000428154 NCKAP5LQ9HCH0 1330 aa25.48■■□□□ 1.67
PMPCB-202ENST00000428154 RRS1Q15050 365 aaKnown RBP25.48■■□□□ 1.67
PMPCB-202ENST00000428154 MRPL50Q8N5N7 158 aaKnown RBP25.47■■□□□ 1.67
PMPCB-202ENST00000428154 KIF24Q5T7B8 1368 aa25.46■■□□□ 1.67
PMPCB-202ENST00000428154 AMOTL2Q9Y2J4 779 aa25.46■■□□□ 1.67
PMPCB-202ENST00000428154 LAS1LQ9Y4W2 734 aaKnown RBP25.46■■□□□ 1.67
PMPCB-202ENST00000428154 BECN1Q14457 450 aa25.45■■□□□ 1.66
PMPCB-202ENST00000428154 USP19O94966 1318 aa25.45■■□□□ 1.66
PMPCB-202ENST00000428154 RGPD1P0DJD0 1748 aa25.45■■□□□ 1.66
PMPCB-202ENST00000428154 MBIPQ9NS73 344 aa25.44■■□□□ 1.66
PMPCB-202ENST00000428154 ANKARQ7Z5J8 1434 aa25.43■■□□□ 1.66
PMPCB-202ENST00000428154 DEKP35659 375 aaKnown RBP25.43■■□□□ 1.66
PMPCB-202ENST00000428154 EIF4A2Q14240 407 aaKnown RBP25.43■■□□□ 1.66
PMPCB-202ENST00000428154 API5Q9BZZ5 524 aaKnown RBP25.43■■□□□ 1.66
PMPCB-202ENST00000428154 XRN1Q8IZH2 1706 aaKnown RBP25.43■■□□□ 1.66
PMPCB-202ENST00000428154 TWISTNBQ3B726 338 aaPredicted RBP25.42■■□□□ 1.66
PMPCB-202ENST00000428154 ARHGEF10O15013 1369 aa25.41■■□□□ 1.66
PMPCB-202ENST00000428154 SLC26A8Q96RN1 970 aa25.4■■□□□ 1.66
PMPCB-202ENST00000428154 ABCC4O15439 1325 aa25.4■■□□□ 1.66
PMPCB-202ENST00000428154 CEBPAP49715 358 aaPredicted RBP25.39■■□□□ 1.65
PMPCB-202ENST00000428154 GCC1Q96CN9 775 aa25.39■■□□□ 1.65
PMPCB-202ENST00000428154 KIAA0232Q92628 1395 aa25.39■■□□□ 1.65
PMPCB-202ENST00000428154 FMN2Q9NZ56 1722 aa25.38■■□□□ 1.65
PMPCB-202ENST00000428154 PEAK1Q9H792 1746 aa25.38■■□□□ 1.65
PMPCB-202ENST00000428154 ZBTB7BO15156 539 aaPredicted RBP25.37■■□□□ 1.65
PMPCB-202ENST00000428154 SULT6B1Q6IMI4 303 aa25.37■■□□□ 1.65
PMPCB-202ENST00000428154 SBNO1A3KN83 1393 aa25.37■■□□□ 1.65
PMPCB-202ENST00000428154 TBC1D32Q96NH3 1257 aa25.37■■□□□ 1.65
PMPCB-202ENST00000428154 THUMPD2Q9BTF0 503 aaKnown RBP25.37■■□□□ 1.65
PMPCB-202ENST00000428154 USP54Q70EL1 1684 aa25.36■■□□□ 1.65
PMPCB-202ENST00000428154 NUCB1Q02818 461 aa25.36■■□□□ 1.65
PMPCB-202ENST00000428154 FLT4P35916 1363 aa25.36■■□□□ 1.65
PMPCB-202ENST00000428154 TSPYL6Q8N831 410 aa25.34■■□□□ 1.65
PMPCB-202ENST00000428154 CHL1O00533 1208 aa25.34■■□□□ 1.65
PMPCB-202ENST00000428154 SEC24BO95487 1268 aa25.34■■□□□ 1.65
PMPCB-202ENST00000428154 NGDNQ8NEJ9 315 aaKnown RBP25.32■■□□□ 1.64
PMPCB-202ENST00000428154 KDRP35968 1356 aa25.32■■□□□ 1.64
PMPCB-202ENST00000428154 C8orf58Q8NAV2 365 aa25.32■■□□□ 1.64
PMPCB-202ENST00000428154 CHD1LQ86WJ1 897 aa25.3■■□□□ 1.64
PMPCB-202ENST00000428154 EIF5BO60841 1220 aaKnown RBP25.29■■□□□ 1.64
PMPCB-202ENST00000428154 CEP170BQ9Y4F5 1589 aaPredicted RBP25.29■■□□□ 1.64
PMPCB-202ENST00000428154 HTATSF1O43719 755 aaKnown RBP25.29■■□□□ 1.64
PMPCB-202ENST00000428154 HSP90AB2PQ58FF8 381 aa25.29■■□□□ 1.64
PMPCB-202ENST00000428154 AEBP1Q8IUX7 1158 aa25.29■■□□□ 1.64
PMPCB-202ENST00000428154 MAP3K19Q56UN5 1328 aa25.28■■□□□ 1.64
PMPCB-202ENST00000428154 SLC4A3P48751 1232 aa25.28■■□□□ 1.64
PMPCB-202ENST00000428154 PTPRCP08575 1304 aa25.28■■□□□ 1.64
PMPCB-202ENST00000428154 RGPD8O14715 1765 aaPredicted RBP25.28■■□□□ 1.64
PMPCB-202ENST00000428154 PIK3C2AO00443 1686 aa25.27■■□□□ 1.64
PMPCB-202ENST00000428154 FAM83GA6ND36 823 aa25.27■■□□□ 1.64
PMPCB-202ENST00000428154 NFKBIBQ15653 356 aa25.27■■□□□ 1.64
PMPCB-202ENST00000428154 INTS3Q68E01 1043 aaKnown RBP25.26■■□□□ 1.63
PMPCB-202ENST00000428154 GAS2L2Q8NHY3 880 aa25.26■■□□□ 1.63
PMPCB-202ENST00000428154 NUTM2FA1L443 756 aa25.26■■□□□ 1.63
PMPCB-202ENST00000428154 CRB1P82279 1406 aa25.25■■□□□ 1.63
PMPCB-202ENST00000428154 IGSF1Q8N6C5 1336 aa25.25■■□□□ 1.63
PMPCB-202ENST00000428154 ELL2O00472 640 aaPredicted RBP25.24■■□□□ 1.63
PMPCB-202ENST00000428154 BMP2KLQ5H9B9 411 aa25.24■■□□□ 1.63
PMPCB-202ENST00000428154 DCTN1Q14203 1278 aa25.23■■□□□ 1.63
PMPCB-202ENST00000428154 SOS1Q07889 1333 aaPredicted RBP25.23■■□□□ 1.63
PMPCB-202ENST00000428154 AMPHP49418 695 aa25.23■■□□□ 1.63
PMPCB-202ENST00000428154 RTF1Q92541 710 aaKnown RBP25.23■■□□□ 1.63
PMPCB-202ENST00000428154 C22orf23Q9BZE7 217 aa25.22■■□□□ 1.63
PMPCB-202ENST00000428154 ZNF142P52746 1687 aaPredicted RBP25.21■■□□□ 1.63
PMPCB-202ENST00000428154 CHD2O14647 1828 aaKnown RBP25.2■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms