RNA–Protein interactions for RNA: ENST00000427785.5

RFC4-206, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 485 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-206ENST00000427785 ZBED9Q6R2W3 1325 aa16.06■□□□□ 0.16
RFC4-206ENST00000427785 KCNH5Q8NCM2 988 aa16.06■□□□□ 0.16
RFC4-206ENST00000427785 NUDCQ9Y266 331 aa16.06■□□□□ 0.16
RFC4-206ENST00000427785 KIF24Q5T7B8 1368 aa16.05■□□□□ 0.16
RFC4-206ENST00000427785 HOXC9P31274 260 aa16.05■□□□□ 0.16
RFC4-206ENST00000427785 EIF4A2Q14240 407 aaKnown RBP16.05■□□□□ 0.16
RFC4-206ENST00000427785 HSP90AB2PQ58FF8 381 aa16.05■□□□□ 0.16
RFC4-206ENST00000427785 CABLES1Q8TDN4 633 aa16.05■□□□□ 0.16
RFC4-206ENST00000427785 ABCC6O95255 1503 aa16.04■□□□□ 0.16
RFC4-206ENST00000427785 GCP02774 474 aa16.04■□□□□ 0.16
RFC4-206ENST00000427785 IL13P35225 146 aa16.04■□□□□ 0.16
RFC4-206ENST00000427785 PIP4K2BP78356 416 aa16.04■□□□□ 0.16
RFC4-206ENST00000427785 LMO7Q8WWI1 1683 aa16.04■□□□□ 0.16
RFC4-206ENST00000427785 UBAP1LF5GYI3 381 aa16.03■□□□□ 0.16
RFC4-206ENST00000427785 TOM1O60784 492 aa16.02■□□□□ 0.16
RFC4-206ENST00000427785 CERKQ8TCT0 537 aa16.02■□□□□ 0.16
RFC4-206ENST00000427785 SALL2Q9Y467 1007 aaPredicted RBP16.02■□□□□ 0.16
RFC4-206ENST00000427785 PLCH1Q4KWH8 1693 aa16.01■□□□□ 0.15
RFC4-206ENST00000427785 VIRMAQ69YN4 1812 aaKnown RBP16.01■□□□□ 0.15
RFC4-206ENST00000427785 HMOX1P09601 288 aa16■□□□□ 0.15
RFC4-206ENST00000427785 ZC3H6P61129 1189 aaKnown RBP16■□□□□ 0.15
RFC4-206ENST00000427785 ARHGEF25Q86VW2 580 aa16■□□□□ 0.15
RFC4-206ENST00000427785 KIAA0232Q92628 1395 aa16■□□□□ 0.15
RFC4-206ENST00000427785 APAF1O14727 1248 aa15.99■□□□□ 0.15
RFC4-206ENST00000427785 IP6K1Q92551 441 aa15.99■□□□□ 0.15
RFC4-206ENST00000427785 RUNDC1Q96C34 613 aa15.99■□□□□ 0.15
RFC4-206ENST00000427785 LTV1Q96GA3 475 aaPredicted RBP15.99■□□□□ 0.15
RFC4-206ENST00000427785 RSPH6AQ9H0K4 717 aa15.99■□□□□ 0.15
RFC4-206ENST00000427785 COL14A1Q05707 1796 aaKnown RBP15.98■□□□□ 0.15
RFC4-206ENST00000427785 PRKAR2BP31323 418 aa15.98■□□□□ 0.15
RFC4-206ENST00000427785 AEBP1Q8IUX7 1158 aa15.98■□□□□ 0.15
RFC4-206ENST00000427785 CPDO75976 1380 aa15.98■□□□□ 0.15
RFC4-206ENST00000427785 MAPK8IP3Q9UPT6 1336 aa15.97■□□□□ 0.15
RFC4-206ENST00000427785 HAP1P54257 671 aaPredicted RBP15.97■□□□□ 0.15
RFC4-206ENST00000427785 RRP7AQ9Y3A4 280 aaKnown RBP15.97■□□□□ 0.15
RFC4-206ENST00000427785 IGSF1Q8N6C5 1336 aa15.96■□□□□ 0.15
RFC4-206ENST00000427785 CHRNA2Q15822 529 aa15.96■□□□□ 0.15
RFC4-206ENST00000427785 PLEKHF1Q96S99 279 aa15.96■□□□□ 0.15
RFC4-206ENST00000427785 TCP11L2Q8N4U5 519 aa15.95■□□□□ 0.14
RFC4-206ENST00000427785 LRRC59Q96AG4 307 aaKnown RBP15.95■□□□□ 0.14
RFC4-206ENST00000427785 WNK3Q9BYP7 1800 aa15.94■□□□□ 0.14
RFC4-206ENST00000427785 FCHSD2O94868 740 aa15.94■□□□□ 0.14
RFC4-206ENST00000427785 SULT6B1Q6IMI4 303 aa15.94■□□□□ 0.14
RFC4-206ENST00000427785 EYA1Q99502 592 aa15.94■□□□□ 0.14
RFC4-206ENST00000427785 KDRP35968 1356 aa15.94■□□□□ 0.14
RFC4-206ENST00000427785 NRAPQ86VF7 1730 aa15.94■□□□□ 0.14
RFC4-206ENST00000427785 USHBP1Q8N6Y0 703 aa15.93■□□□□ 0.14
RFC4-206ENST00000427785 ANKRD24Q8TF21 1146 aa15.93■□□□□ 0.14
RFC4-206ENST00000427785 PRDM11Q9NQV5 511 aa15.93■□□□□ 0.14
RFC4-206ENST00000427785 AXIN2Q9Y2T1 843 aa15.93■□□□□ 0.14
RFC4-206ENST00000427785 NCAPD2Q15021 1401 aa15.93■□□□□ 0.14
RFC4-206ENST00000427785 PARP4Q9UKK3 1724 aaKnown RBP15.92■□□□□ 0.14
RFC4-206ENST00000427785 NEUROD2Q15784 382 aa15.92■□□□□ 0.14
RFC4-206ENST00000427785 ERBB3P21860 1342 aa15.92■□□□□ 0.14
RFC4-206ENST00000427785 ZNF521Q96K83 1311 aa15.92■□□□□ 0.14
RFC4-206ENST00000427785 COL5A2P05997 1499 aaPredicted RBP15.91■□□□□ 0.14
RFC4-206ENST00000427785 PNNQ9H307 717 aaKnown RBP15.91■□□□□ 0.14
RFC4-206ENST00000427785 LRRC37A3O60309 1634 aa15.9■□□□□ 0.14
RFC4-206ENST00000427785 NEFMP07197 916 aa15.9■□□□□ 0.14
RFC4-206ENST00000427785 PHACTR3Q96KR7 559 aa15.9■□□□□ 0.14
RFC4-206ENST00000427785 PKD1L3Q7Z443 1732 aa15.9■□□□□ 0.14
RFC4-206ENST00000427785 NWD2Q9ULI1 1742 aa15.9■□□□□ 0.14
RFC4-206ENST00000427785 TMPOP42166 694 aaKnown RBP15.89■□□□□ 0.13
RFC4-206ENST00000427785 NBPF6Q5VWK0 638 aa15.88■□□□□ 0.13
RFC4-206ENST00000427785 CDCA7LQ96GN5 454 aa15.88■□□□□ 0.13
RFC4-206ENST00000427785 NBPF4Q96M43 638 aa15.88■□□□□ 0.13
RFC4-206ENST00000427785 NFE2L2Q16236 605 aa15.87■□□□□ 0.13
RFC4-206ENST00000427785 SHANK3Q9BYB0 1731 aa15.87■□□□□ 0.13
RFC4-206ENST00000427785 MEGF6O75095 1541 aa15.86■□□□□ 0.13
RFC4-206ENST00000427785 CSB-PGBD3P0DP91 1061 aa15.86■□□□□ 0.13
RFC4-206ENST00000427785 WWC1Q8IX03 1113 aa15.86■□□□□ 0.13
RFC4-206ENST00000427785 NGEFQ8N5V2 710 aa15.86■□□□□ 0.13
RFC4-206ENST00000427785 RIPK4P57078 832 aa15.85■□□□□ 0.13
RFC4-206ENST00000427785 PDE3BQ13370 1112 aa15.85■□□□□ 0.13
RFC4-206ENST00000427785 PHF23Q9BUL5 403 aaPredicted RBP15.85■□□□□ 0.13
RFC4-206ENST00000427785 JCADQ9P266 1359 aa15.85■□□□□ 0.13
RFC4-206ENST00000427785 LRP6O75581 1613 aa15.84■□□□□ 0.13
RFC4-206ENST00000427785 NUTM2BA6NNL0 878 aaPredicted RBP15.84■□□□□ 0.13
RFC4-206ENST00000427785 NUTM2EB1AL46 878 aaPredicted RBP15.84■□□□□ 0.13
RFC4-206ENST00000427785 GOLGA2Q08379 1002 aa15.84■□□□□ 0.13
RFC4-206ENST00000427785 CCDC27Q2M243 656 aa15.84■□□□□ 0.13
RFC4-206ENST00000427785 NUTM2AQ8IVF1 878 aaPredicted RBP15.84■□□□□ 0.13
RFC4-206ENST00000427785 NLRP2Q9NX02 1062 aa15.84■□□□□ 0.13
RFC4-206ENST00000427785 TRIM35Q9UPQ4 493 aa15.84■□□□□ 0.13
RFC4-206ENST00000427785 FAM83GA6ND36 823 aa15.83■□□□□ 0.12
RFC4-206ENST00000427785 SCN11AQ9UI33 1791 aa15.82■□□□□ 0.12
RFC4-206ENST00000427785 ADAMTS2O95450 1211 aa15.82■□□□□ 0.12
RFC4-206ENST00000427785 SPINK5Q9NQ38 1064 aaPredicted RBP15.82■□□□□ 0.12
RFC4-206ENST00000427785 STRN4Q9NRL3 753 aa15.82■□□□□ 0.12
RFC4-206ENST00000427785 WDR17Q8IZU2 1322 aa15.82■□□□□ 0.12
RFC4-206ENST00000427785 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.82■□□□□ 0.12
RFC4-206ENST00000427785 HSPA1LP34931 641 aa15.81■□□□□ 0.12
RFC4-206ENST00000427785 MTHFSDQ2M296 383 aaKnown RBP15.81■□□□□ 0.12
RFC4-206ENST00000427785 NCBP3Q53F19 620 aaKnown RBP15.81■□□□□ 0.12
RFC4-206ENST00000427785 THUMPD2Q9BTF0 503 aaKnown RBP15.81■□□□□ 0.12
RFC4-206ENST00000427785 SIPA1L3O60292 1781 aaPredicted RBP15.8■□□□□ 0.12
RFC4-206ENST00000427785 SLFN5Q08AF3 891 aa15.8■□□□□ 0.12
RFC4-206ENST00000427785 ADAMTS7Q9UKP4 1686 aa15.79■□□□□ 0.12
RFC4-206ENST00000427785 CRB1P82279 1406 aa15.79■□□□□ 0.12
RFC4-206ENST00000427785 MAP3K5Q99683 1374 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 1047.7 ms