RNA–Protein interactions for RNA: ENST00000427157.1

LINC02541-201, Transcript of long intergenic non-protein coding RNA 2541, humanhuman

TSL 3 BASIC

Gene LINC02541, Length 327 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02541-201ENST00000427157 VEGFBP49765 207 aa8.68□□□□□ -1.02
LINC02541-201ENST00000427157 LINC00528Q8N1L1 170 aa8.68□□□□□ -1.02
LINC02541-201ENST00000427157 SLC10A4Q96EP9 437 aa8.68□□□□□ -1.02
LINC02541-201ENST00000427157 ZBTB33Q86T24 672 aa8.67□□□□□ -1.02
LINC02541-201ENST00000427157 GOPCQ9HD26 462 aa8.67□□□□□ -1.02
LINC02541-201ENST00000427157 EMILIN1Q9Y6C2 1016 aa8.67□□□□□ -1.02
LINC02541-201ENST00000427157 NPAS3Q8IXF0 933 aa8.66□□□□□ -1.02
LINC02541-201ENST00000427157 SLC16A10Q8TF71 515 aa8.66□□□□□ -1.02
LINC02541-201ENST00000427157 PCMTD1Q96MG8 357 aaPredicted RBP8.66□□□□□ -1.02
LINC02541-201ENST00000427157 H3BM21 787 aa8.65□□□□□ -1.02
LINC02541-201ENST00000427157 UPP2O95045 317 aa8.65□□□□□ -1.02
LINC02541-201ENST00000427157 BMP2P12643 396 aa8.65□□□□□ -1.02
LINC02541-201ENST00000427157 PTK2Q05397 1052 aa8.65□□□□□ -1.02
LINC02541-201ENST00000427157 PPP1R26Q5T8A7 1209 aaPredicted RBP8.65□□□□□ -1.02
LINC02541-201ENST00000427157 IL27Q8NEV9 243 aa8.65□□□□□ -1.02
LINC02541-201ENST00000427157 ADAM32Q8TC27 787 aa8.65□□□□□ -1.02
LINC02541-201ENST00000427157 KCTD15Q96SI1 283 aaPredicted RBP8.65□□□□□ -1.02
LINC02541-201ENST00000427157 GPSM3Q9Y4H4 160 aa8.65□□□□□ -1.02
LINC02541-201ENST00000427157 MAN1A2O60476 641 aa8.64□□□□□ -1.03
LINC02541-201ENST00000427157 CDV3Q9UKY7 258 aaKnown RBP8.64□□□□□ -1.03
LINC02541-201ENST00000427157 BRPF1P55201 1214 aaPredicted RBP8.63□□□□□ -1.03
LINC02541-201ENST00000427157 INTS6LQ5JSJ4 861 aaKnown RBP8.63□□□□□ -1.03
LINC02541-201ENST00000427157 TRIM34Q9BYJ4 488 aa8.63□□□□□ -1.03
LINC02541-201ENST00000427157 ERBB4Q15303 1308 aa8.62□□□□□ -1.03
LINC02541-201ENST00000427157 INSM1Q01101 510 aaPredicted RBP8.62□□□□□ -1.03
LINC02541-201ENST00000427157 CBLBQ13191 982 aa8.62□□□□□ -1.03
LINC02541-201ENST00000427157 PNMA1Q8ND90 353 aa8.62□□□□□ -1.03
LINC02541-201ENST00000427157 IRF7Q92985 503 aa8.62□□□□□ -1.03
LINC02541-201ENST00000427157 TSEN34Q9BSV6 310 aaKnown RBP8.62□□□□□ -1.03
LINC02541-201ENST00000427157 PGPEP1Q9NXJ5 209 aa8.62□□□□□ -1.03
LINC02541-201ENST00000427157 SOS2Q07890 1332 aaPredicted RBP8.61□□□□□ -1.03
LINC02541-201ENST00000427157 GMPRP36959 345 aa8.61□□□□□ -1.03
LINC02541-201ENST00000427157 DNMT3LQ9UJW3 386 aa8.61□□□□□ -1.03
LINC02541-201ENST00000427157 TMEM259Q4ZIN3 620 aa8.6□□□□□ -1.03
LINC02541-201ENST00000427157 Q6ZVU0 165 aa8.6□□□□□ -1.03
LINC02541-201ENST00000427157 DHX9Q08211 1270 aaKnown RBP8.59□□□□□ -1.03
LINC02541-201ENST00000427157 NBPF20Q3BBV1 942 aa8.59□□□□□ -1.03
LINC02541-201ENST00000427157 STK17AQ9UEE5 414 aa8.58□□□□□ -1.04
LINC02541-201ENST00000427157 DZIP3Q86Y13 1208 aaKnown RBP8.57□□□□□ -1.04
LINC02541-201ENST00000427157 GJD4Q96KN9 370 aaPredicted RBP8.57□□□□□ -1.04
LINC02541-201ENST00000427157 TTLL8A6PVC2 850 aa8.56□□□□□ -1.04
LINC02541-201ENST00000427157 SPINT1O43278 529 aa8.56□□□□□ -1.04
LINC02541-201ENST00000427157 VSIG8P0DPA2 414 aa8.56□□□□□ -1.04
LINC02541-201ENST00000427157 RAB15P59190 212 aa8.56□□□□□ -1.04
LINC02541-201ENST00000427157 TMPRSS4Q9NRS4 437 aa8.56□□□□□ -1.04
LINC02541-201ENST00000427157 TPRNQ4KMQ1 711 aa8.55□□□□□ -1.04
LINC02541-201ENST00000427157 ZNF784Q8NCA9 323 aaPredicted RBP8.55□□□□□ -1.04
LINC02541-201ENST00000427157 AGBL1Q96MI9 1066 aa8.55□□□□□ -1.04
LINC02541-201ENST00000427157 ESPNB1AK53 854 aa8.54□□□□□ -1.04
LINC02541-201ENST00000427157 PPFIA3O75145 1194 aa8.54□□□□□ -1.04
LINC02541-201ENST00000427157 RELBQ01201 579 aa8.54□□□□□ -1.04
LINC02541-201ENST00000427157 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.54□□□□□ -1.04
LINC02541-201ENST00000427157 ZBBXA8MT70 800 aa8.53□□□□□ -1.04
LINC02541-201ENST00000427157 ERVH48-1M5A8F1 160 aa8.53□□□□□ -1.04
LINC02541-201ENST00000427157 LORP23490 312 aaPredicted RBP8.53□□□□□ -1.04
LINC02541-201ENST00000427157 FIGNL2A6NMB9 653 aa8.52□□□□□ -1.05
LINC02541-201ENST00000427157 LILRA1O75019 489 aa8.52□□□□□ -1.05
LINC02541-201ENST00000427157 FBXO45P0C2W1 286 aa8.52□□□□□ -1.05
LINC02541-201ENST00000427157 CTSOP43234 321 aaPredicted RBP8.52□□□□□ -1.05
LINC02541-201ENST00000427157 PTSQ03393 145 aa8.51□□□□□ -1.05
LINC02541-201ENST00000427157 ZSCAN1Q8NBB4 408 aa8.51□□□□□ -1.05
LINC02541-201ENST00000427157 INSM2Q96T92 566 aaPredicted RBP8.51□□□□□ -1.05
LINC02541-201ENST00000427157 GPR37L1O60883 481 aa8.5□□□□□ -1.05
LINC02541-201ENST00000427157 ADH1AP07327 375 aa8.5□□□□□ -1.05
LINC02541-201ENST00000427157 ADD1P35611 737 aaKnown RBP8.5□□□□□ -1.05
LINC02541-201ENST00000427157 SEPT12Q8IYM1 358 aa8.5□□□□□ -1.05
LINC02541-201ENST00000427157 MTMR14Q8NCE2 650 aa8.5□□□□□ -1.05
LINC02541-201ENST00000427157 PCDHB9Q9Y5E1 797 aa8.5□□□□□ -1.05
LINC02541-201ENST00000427157 KDF1Q8NAX2 398 aaPredicted RBP8.49□□□□□ -1.05
LINC02541-201ENST00000427157 BANK1Q8NDB2 785 aa8.49□□□□□ -1.05
LINC02541-201ENST00000427157 ZNF395Q9H8N7 513 aaPredicted RBP8.49□□□□□ -1.05
LINC02541-201ENST00000427157 CYLDQ9NQC7 956 aa8.49□□□□□ -1.05
LINC02541-201ENST00000427157 GIGYF1O75420 1035 aaPredicted RBP8.48□□□□□ -1.05
LINC02541-201ENST00000427157 POLMQ9NP87 494 aaPredicted RBP8.48□□□□□ -1.05
LINC02541-201ENST00000427157 SOCS7O14512 581 aa8.47□□□□□ -1.05
LINC02541-201ENST00000427157 RNF217Q8TC41 542 aa8.47□□□□□ -1.05
LINC02541-201ENST00000427157 PTGIRP43119 386 aa8.46□□□□□ -1.06
LINC02541-201ENST00000427157 FOXD4L5Q5VV16 416 aaPredicted RBP8.46□□□□□ -1.06
LINC02541-201ENST00000427157 CCDC155Q8N6L0 562 aa8.46□□□□□ -1.06
LINC02541-201ENST00000427157 SNRKQ9NRH2 765 aa8.46□□□□□ -1.06
LINC02541-201ENST00000427157 FAM181BA6NEQ2 426 aa8.45□□□□□ -1.06
LINC02541-201ENST00000427157 NR1H3Q13133 447 aa8.45□□□□□ -1.06
LINC02541-201ENST00000427157 NDUFB9Q9Y6M9 179 aa8.45□□□□□ -1.06
LINC02541-201ENST00000427157 SLC35F4A4IF30 521 aa8.44□□□□□ -1.06
LINC02541-201ENST00000427157 KRT76Q01546 638 aa8.43□□□□□ -1.06
LINC02541-201ENST00000427157 GPR161Q8N6U8 529 aaKnown RBP8.43□□□□□ -1.06
LINC02541-201ENST00000427157 SENP3-EIF4A1A0A087X0R7 540 aa8.42□□□□□ -1.06
LINC02541-201ENST00000427157 ATP5J2-PTCD1G3V325 749 aa8.41□□□□□ -1.06
LINC02541-201ENST00000427157 APBB1O00213 710 aa8.41□□□□□ -1.06
LINC02541-201ENST00000427157 ITGA6P23229 1130 aa8.41□□□□□ -1.06
LINC02541-201ENST00000427157 ERVK-9P63128 1117 aa8.41□□□□□ -1.06
LINC02541-201ENST00000427157 NANOS1Q8WY41 292 aaKnown RBP8.41□□□□□ -1.06
LINC02541-201ENST00000427157 RNF20Q5VTR2 975 aa8.4□□□□□ -1.06
LINC02541-201ENST00000427157 TRIM52Q96A61 297 aa8.4□□□□□ -1.06
LINC02541-201ENST00000427157 SCTRP47872 440 aa8.39□□□□□ -1.07
LINC02541-201ENST00000427157 MCCD1P59942 119 aaPredicted RBP8.39□□□□□ -1.07
LINC02541-201ENST00000427157 CC2D2BQ6DHV5 1058 aa8.39□□□□□ -1.07
LINC02541-201ENST00000427157 LYSMD3Q7Z3D4 306 aa8.39□□□□□ -1.07
LINC02541-201ENST00000427157 CCDC125Q86Z20 511 aa8.39□□□□□ -1.07
LINC02541-201ENST00000427157 ZNF592Q92610 1267 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms