RNA–Protein interactions for RNA: ENST00000423717.1

EPDR1-202, Transcript of ependymin related 1, humanhuman

TSL 1 (best) BASIC

Gene EPDR1, Length 638 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPDR1-202ENST00000423717 COL18A1P39060 1754 aa31.03■■■□□ 2.56
EPDR1-202ENST00000423717 CNGB1Q14028 1251 aaPredicted RBP31.03■■■□□ 2.56
EPDR1-202ENST00000423717 AXIN2Q9Y2T1 843 aa31.03■■■□□ 2.56
EPDR1-202ENST00000423717 AMPHP49418 695 aa31.02■■■□□ 2.56
EPDR1-202ENST00000423717 CSB-PGBD3P0DP91 1061 aa31.01■■■□□ 2.55
EPDR1-202ENST00000423717 TNNT2P45379 298 aaPredicted RBP31.01■■■□□ 2.55
EPDR1-202ENST00000423717 RRS1Q15050 365 aaKnown RBP31.01■■■□□ 2.55
EPDR1-202ENST00000423717 USP35Q9P2H5 1018 aa31.01■■■□□ 2.55
EPDR1-202ENST00000423717 LARP1Q6PKG0 1096 aaKnown RBP31■■■□□ 2.55
EPDR1-202ENST00000423717 ANKRD26Q9UPS8 1709 aa31■■■□□ 2.55
EPDR1-202ENST00000423717 A0A0G2JS52 829 aa30.99■■■□□ 2.55
EPDR1-202ENST00000423717 MYT1Q01538 1121 aa30.99■■■□□ 2.55
EPDR1-202ENST00000423717 COL5A2P05997 1499 aaPredicted RBP30.99■■■□□ 2.55
EPDR1-202ENST00000423717 MAP3K19Q56UN5 1328 aa30.98■■■□□ 2.55
EPDR1-202ENST00000423717 GLI3P10071 1580 aa30.98■■■□□ 2.55
EPDR1-202ENST00000423717 MORC1Q86VD1 984 aa30.97■■■□□ 2.55
EPDR1-202ENST00000423717 SPATA31A5Q5VU36 1347 aa30.97■■■□□ 2.55
EPDR1-202ENST00000423717 SPATA31A7Q8IWB4 1347 aa30.97■■■□□ 2.55
EPDR1-202ENST00000423717 NSD2O96028 1365 aa30.96■■■□□ 2.55
EPDR1-202ENST00000423717 TOM1L2Q6ZVM7 507 aa30.96■■■□□ 2.55
EPDR1-202ENST00000423717 LTV1Q96GA3 475 aaPredicted RBP30.95■■■□□ 2.55
EPDR1-202ENST00000423717 RGS12O14924 1447 aa30.94■■■□□ 2.54
EPDR1-202ENST00000423717 PPM1GO15355 546 aaPredicted RBP30.94■■■□□ 2.54
EPDR1-202ENST00000423717 FAM98CQ17RN3 349 aaKnown RBP30.94■■■□□ 2.54
EPDR1-202ENST00000423717 CC2D1BQ5T0F9 858 aaKnown RBP30.94■■■□□ 2.54
EPDR1-202ENST00000423717 PER1O15534 1290 aaPredicted RBP30.93■■■□□ 2.54
EPDR1-202ENST00000423717 IP6K1Q92551 441 aa30.93■■■□□ 2.54
EPDR1-202ENST00000423717 SPATA31A1Q5TZJ5 1347 aa30.93■■■□□ 2.54
EPDR1-202ENST00000423717 AMER1Q5JTC6 1135 aaPredicted RBP30.92■■■□□ 2.54
EPDR1-202ENST00000423717 ABCC6O95255 1503 aa30.92■■■□□ 2.54
EPDR1-202ENST00000423717 CDK12Q9NYV4 1490 aaPredicted RBP30.91■■■□□ 2.54
EPDR1-202ENST00000423717 HOXC9P31274 260 aa30.91■■■□□ 2.54
EPDR1-202ENST00000423717 ANKRD24Q8TF21 1146 aa30.91■■■□□ 2.54
EPDR1-202ENST00000423717 WDR17Q8IZU2 1322 aa30.91■■■□□ 2.54
EPDR1-202ENST00000423717 MAP2P11137 1827 aaKnown RBP30.91■■■□□ 2.54
EPDR1-202ENST00000423717 CRB1P82279 1406 aa30.9■■■□□ 2.54
EPDR1-202ENST00000423717 EMILIN1Q9Y6C2 1016 aa30.9■■■□□ 2.54
EPDR1-202ENST00000423717 BLMP54132 1417 aaPredicted RBP30.88■■■□□ 2.53
EPDR1-202ENST00000423717 SEPT12Q8IYM1 358 aa30.87■■■□□ 2.53
EPDR1-202ENST00000423717 NLRP2Q9NX02 1062 aa30.87■■■□□ 2.53
EPDR1-202ENST00000423717 DDX10Q13206 875 aaKnown RBP30.86■■■□□ 2.53
EPDR1-202ENST00000423717 TCP11L2Q8N4U5 519 aa30.86■■■□□ 2.53
EPDR1-202ENST00000423717 ERBB3P21860 1342 aa30.86■■■□□ 2.53
EPDR1-202ENST00000423717 RTL1A6NKG5 1358 aa30.86■■■□□ 2.53
EPDR1-202ENST00000423717 PEAK1Q9H792 1746 aa30.84■■■□□ 2.53
EPDR1-202ENST00000423717 FLT4P35916 1363 aa30.83■■■□□ 2.53
EPDR1-202ENST00000423717 HSP90AB2PQ58FF8 381 aa30.83■■■□□ 2.53
EPDR1-202ENST00000423717 POLKQ9UBT6 870 aa30.83■■■□□ 2.53
EPDR1-202ENST00000423717 CARD10Q9BWT7 1032 aa30.81■■■□□ 2.52
EPDR1-202ENST00000423717 THRAP3Q9Y2W1 955 aaKnown RBP30.81■■■□□ 2.52
EPDR1-202ENST00000423717 BRWD3Q6RI45 1802 aa30.8■■■□□ 2.52
EPDR1-202ENST00000423717 ONECUT3O60422 494 aaPredicted RBP30.8■■■□□ 2.52
EPDR1-202ENST00000423717 SMG6Q86US8 1419 aaKnown RBP30.8■■■□□ 2.52
EPDR1-202ENST00000423717 BARGINQ6ZT62 677 aa30.79■■■□□ 2.52
EPDR1-202ENST00000423717 KIF24Q5T7B8 1368 aa30.79■■■□□ 2.52
EPDR1-202ENST00000423717 ZNF316A6NFI3 1004 aaPredicted RBP30.77■■■□□ 2.52
EPDR1-202ENST00000423717 INSRP06213 1382 aa30.77■■■□□ 2.52
EPDR1-202ENST00000423717 NPC1L1Q9UHC9 1359 aa30.77■■■□□ 2.52
EPDR1-202ENST00000423717 RGPD2P0DJD1 1756 aa30.76■■■□□ 2.51
EPDR1-202ENST00000423717 FAM208AQ9UK61 1670 aaKnown RBP30.75■■■□□ 2.51
EPDR1-202ENST00000423717 SOCS7O14512 581 aa30.74■■■□□ 2.51
EPDR1-202ENST00000423717 KRT27Q7Z3Y8 459 aa30.74■■■□□ 2.51
EPDR1-202ENST00000423717 THSD7AQ9UPZ6 1657 aa30.74■■■□□ 2.51
EPDR1-202ENST00000423717 WNK3Q9BYP7 1800 aa30.71■■■□□ 2.51
EPDR1-202ENST00000423717 PDE3BQ13370 1112 aa30.7■■■□□ 2.51
EPDR1-202ENST00000423717 USHBP1Q8N6Y0 703 aa30.7■■■□□ 2.51
EPDR1-202ENST00000423717 NBPF6Q5VWK0 638 aa30.69■■■□□ 2.5
EPDR1-202ENST00000423717 NBPF4Q96M43 638 aa30.69■■■□□ 2.5
EPDR1-202ENST00000423717 MTHFSP49914 203 aa30.68■■■□□ 2.5
EPDR1-202ENST00000423717 CDCA7Q9BWT1 371 aaPredicted RBP30.68■■■□□ 2.5
EPDR1-202ENST00000423717 DDB1Q16531 1140 aa30.67■■■□□ 2.5
EPDR1-202ENST00000423717 FAM182BQ5T319 152 aa30.67■■■□□ 2.5
EPDR1-202ENST00000423717 IL2RBP14784 551 aa30.66■■■□□ 2.5
EPDR1-202ENST00000423717 PARP4Q9UKK3 1724 aaKnown RBP30.66■■■□□ 2.5
EPDR1-202ENST00000423717 EIF4A2Q14240 407 aaKnown RBP30.65■■■□□ 2.5
EPDR1-202ENST00000423717 EXOC5O00471 708 aa30.63■■■□□ 2.49
EPDR1-202ENST00000423717 LRRC37A3O60309 1634 aa30.62■■■□□ 2.49
EPDR1-202ENST00000423717 DISP2A7MBM2 1401 aa30.61■■■□□ 2.49
EPDR1-202ENST00000423717 EYA1Q99502 592 aa30.6■■■□□ 2.49
EPDR1-202ENST00000423717 RAPGEF4Q8WZA2 1011 aa30.59■■■□□ 2.49
EPDR1-202ENST00000423717 TATP17735 454 aaPredicted RBP30.57■■■□□ 2.48
EPDR1-202ENST00000423717 PPP2R1AP30153 589 aa30.57■■■□□ 2.48
EPDR1-202ENST00000423717 UPF1Q92900 1129 aaKnown RBP eCLIP30.57■■■□□ 2.48
EPDR1-202ENST00000423717 CFAP53Q96M91 514 aa30.54■■■□□ 2.48
EPDR1-202ENST00000423717 DIAPH1O60610 1272 aaKnown RBP30.53■■■□□ 2.48
EPDR1-202ENST00000423717 MEGF6O75095 1541 aa30.52■■■□□ 2.48
EPDR1-202ENST00000423717 FAM196AQ6ZSG2 479 aa30.52■■■□□ 2.48
EPDR1-202ENST00000423717 DDX54Q8TDD1 881 aaKnown RBP30.52■■■□□ 2.48
EPDR1-202ENST00000423717 TNS2Q63HR2 1409 aa30.52■■■□□ 2.48
EPDR1-202ENST00000423717 PARD3Q8TEW0 1356 aa30.52■■■□□ 2.48
EPDR1-202ENST00000423717 IL13P35225 146 aa30.51■■■□□ 2.47
EPDR1-202ENST00000423717 MARCH10Q8NA82 808 aaPredicted RBP30.51■■■□□ 2.47
EPDR1-202ENST00000423717 RALBP1Q15311 655 aa30.49■■■□□ 2.47
EPDR1-202ENST00000423717 ZCRB1Q8TBF4 217 aaKnown RBP30.49■■■□□ 2.47
EPDR1-202ENST00000423717 IGSF1Q8N6C5 1336 aa30.48■■■□□ 2.47
EPDR1-202ENST00000423717 OVOS2A0A0G2JMS6 1433 aa30.48■■■□□ 2.47
EPDR1-202ENST00000423717 SF3B2Q13435 895 aaKnown RBP30.48■■■□□ 2.47
EPDR1-202ENST00000423717 U2SURPO15042 1029 aaKnown RBP30.47■■■□□ 2.47
EPDR1-202ENST00000423717 SULT6B1Q6IMI4 303 aa30.46■■■□□ 2.47
EPDR1-202ENST00000423717 TRIM37O94972 964 aa30.45■■■□□ 2.47
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms