RNA–Protein interactions for RNA: ENST00000423108.5

RPUSD3-203, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 756 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-203ENST00000423108 SHPRHQ149N8 1683 aa16.99■□□□□ 0.31
RPUSD3-203ENST00000423108 COL3A1P02461 1466 aaPredicted RBP16.99■□□□□ 0.31
RPUSD3-203ENST00000423108 ABCA3Q99758 1704 aa16.99■□□□□ 0.31
RPUSD3-203ENST00000423108 SPATA31A6Q5VVP1 1343 aa16.98■□□□□ 0.31
RPUSD3-203ENST00000423108 EIF4A2Q14240 407 aaKnown RBP16.98■□□□□ 0.31
RPUSD3-203ENST00000423108 PNISRQ8TF01 805 aaKnown RBP16.98■□□□□ 0.31
RPUSD3-203ENST00000423108 CFAP53Q96M91 514 aa16.98■□□□□ 0.31
RPUSD3-203ENST00000423108 FLT4P35916 1363 aa16.98■□□□□ 0.31
RPUSD3-203ENST00000423108 LTV1Q96GA3 475 aaPredicted RBP16.97■□□□□ 0.31
RPUSD3-203ENST00000423108 KIF24Q5T7B8 1368 aa16.97■□□□□ 0.31
RPUSD3-203ENST00000423108 CDK12Q9NYV4 1490 aaPredicted RBP16.97■□□□□ 0.31
RPUSD3-203ENST00000423108 LRP6O75581 1613 aa16.96■□□□□ 0.31
RPUSD3-203ENST00000423108 DIAPH1O60610 1272 aaKnown RBP16.96■□□□□ 0.31
RPUSD3-203ENST00000423108 RTL1A6NKG5 1358 aa16.96■□□□□ 0.31
RPUSD3-203ENST00000423108 COL18A1P39060 1754 aa16.96■□□□□ 0.31
RPUSD3-203ENST00000423108 ANKRD24Q8TF21 1146 aa16.94■□□□□ 0.3
RPUSD3-203ENST00000423108 LTN1O94822 1766 aa16.94■□□□□ 0.3
RPUSD3-203ENST00000423108 CAMTA1Q9Y6Y1 1673 aa16.94■□□□□ 0.3
RPUSD3-203ENST00000423108 EYA1Q99502 592 aa16.92■□□□□ 0.3
RPUSD3-203ENST00000423108 BTG4Q9NY30 223 aa16.92■□□□□ 0.3
RPUSD3-203ENST00000423108 ADAMTS8Q9UP79 889 aa16.92■□□□□ 0.3
RPUSD3-203ENST00000423108 BLMP54132 1417 aaPredicted RBP16.91■□□□□ 0.3
RPUSD3-203ENST00000423108 NBPF6Q5VWK0 638 aa16.91■□□□□ 0.3
RPUSD3-203ENST00000423108 FAM9BQ8IZU0 186 aa16.91■□□□□ 0.3
RPUSD3-203ENST00000423108 NBPF4Q96M43 638 aa16.91■□□□□ 0.3
RPUSD3-203ENST00000423108 U2SURPO15042 1029 aaKnown RBP16.9■□□□□ 0.3
RPUSD3-203ENST00000423108 C8orf37Q96NL8 207 aa16.9■□□□□ 0.3
RPUSD3-203ENST00000423108 NUDCQ9Y266 331 aa16.9■□□□□ 0.3
RPUSD3-203ENST00000423108 LMO7Q8WWI1 1683 aa16.9■□□□□ 0.3
RPUSD3-203ENST00000423108 ERBB3P21860 1342 aa16.9■□□□□ 0.3
RPUSD3-203ENST00000423108 U2AF1L5P0DN76 240 aaPredicted RBP16.89■□□□□ 0.29
RPUSD3-203ENST00000423108 U2AF1Q01081 240 aaKnown RBP eCLIP16.89■□□□□ 0.29
RPUSD3-203ENST00000423108 LARP1Q6PKG0 1096 aaKnown RBP16.89■□□□□ 0.29
RPUSD3-203ENST00000423108 AEBP1Q8IUX7 1158 aa16.89■□□□□ 0.29
RPUSD3-203ENST00000423108 NGLY1Q96IV0 654 aa16.89■□□□□ 0.29
RPUSD3-203ENST00000423108 RGPD5Q99666 1765 aa16.88■□□□□ 0.29
RPUSD3-203ENST00000423108 ABCC6O95255 1503 aa16.88■□□□□ 0.29
RPUSD3-203ENST00000423108 USHBP1Q8N6Y0 703 aa16.88■□□□□ 0.29
RPUSD3-203ENST00000423108 STRN4Q9NRL3 753 aa16.88■□□□□ 0.29
RPUSD3-203ENST00000423108 COL5A2P05997 1499 aaPredicted RBP16.87■□□□□ 0.29
RPUSD3-203ENST00000423108 COL14A1Q05707 1796 aaKnown RBP16.87■□□□□ 0.29
RPUSD3-203ENST00000423108 SLIT2O94813 1529 aa16.87■□□□□ 0.29
RPUSD3-203ENST00000423108 HMOX1P09601 288 aa16.87■□□□□ 0.29
RPUSD3-203ENST00000423108 CSB-PGBD3P0DP91 1061 aa16.87■□□□□ 0.29
RPUSD3-203ENST00000423108 EVA1CP58658 441 aa16.87■□□□□ 0.29
RPUSD3-203ENST00000423108 WDR43Q15061 677 aaKnown RBP eCLIP16.87■□□□□ 0.29
RPUSD3-203ENST00000423108 MEX3CQ5U5Q3 659 aaKnown RBP16.87■□□□□ 0.29
RPUSD3-203ENST00000423108 FNBP4Q8N3X1 1017 aaPredicted RBP16.87■□□□□ 0.29
RPUSD3-203ENST00000423108 NLRP2Q9NX02 1062 aa16.87■□□□□ 0.29
RPUSD3-203ENST00000423108 IGSF1Q8N6C5 1336 aa16.87■□□□□ 0.29
RPUSD3-203ENST00000423108 SULT6B1Q6IMI4 303 aa16.86■□□□□ 0.29
RPUSD3-203ENST00000423108 WDR17Q8IZU2 1322 aa16.86■□□□□ 0.29
RPUSD3-203ENST00000423108 RSPH6AQ9H0K4 717 aa16.85■□□□□ 0.29
RPUSD3-203ENST00000423108 BCL9LQ86UU0 1499 aa16.85■□□□□ 0.29
RPUSD3-203ENST00000423108 UNC5CLQ8IV45 518 aa16.84■□□□□ 0.29
RPUSD3-203ENST00000423108 CCDC146Q8IYE0 955 aa16.84■□□□□ 0.29
RPUSD3-203ENST00000423108 FCHSD2O94868 740 aa16.83■□□□□ 0.28
RPUSD3-203ENST00000423108 AFF2P51816 1311 aa16.83■□□□□ 0.28
RPUSD3-203ENST00000423108 TOM1L2Q6ZVM7 507 aa16.83■□□□□ 0.28
RPUSD3-203ENST00000423108 PLEKHF1Q96S99 279 aa16.83■□□□□ 0.28
RPUSD3-203ENST00000423108 CARD10Q9BWT7 1032 aa16.83■□□□□ 0.28
RPUSD3-203ENST00000423108 RGPD1P0DJD0 1748 aa16.82■□□□□ 0.28
RPUSD3-203ENST00000423108 SENP3-EIF4A1A0A087X0R7 540 aa16.82■□□□□ 0.28
RPUSD3-203ENST00000423108 USP21Q9UK80 565 aa16.82■□□□□ 0.28
RPUSD3-203ENST00000423108 NCAPD2Q15021 1401 aa16.81■□□□□ 0.28
RPUSD3-203ENST00000423108 KDRP35968 1356 aa16.81■□□□□ 0.28
RPUSD3-203ENST00000423108 PRKAR2BP31323 418 aa16.81■□□□□ 0.28
RPUSD3-203ENST00000423108 PHACTR3Q96KR7 559 aa16.81■□□□□ 0.28
RPUSD3-203ENST00000423108 RGPD2P0DJD1 1756 aa16.81■□□□□ 0.28
RPUSD3-203ENST00000423108 PLCH1Q4KWH8 1693 aa16.81■□□□□ 0.28
RPUSD3-203ENST00000423108 SPATA31A5Q5VU36 1347 aa16.79■□□□□ 0.28
RPUSD3-203ENST00000423108 SPATA31A7Q8IWB4 1347 aa16.79■□□□□ 0.28
RPUSD3-203ENST00000423108 VPS72Q15906 364 aa16.79■□□□□ 0.28
RPUSD3-203ENST00000423108 USP35Q9P2H5 1018 aa16.79■□□□□ 0.28
RPUSD3-203ENST00000423108 NRAPQ86VF7 1730 aa16.79■□□□□ 0.28
RPUSD3-203ENST00000423108 CRB1P82279 1406 aa16.79■□□□□ 0.28
RPUSD3-203ENST00000423108 SPATA31A1Q5TZJ5 1347 aa16.78■□□□□ 0.28
RPUSD3-203ENST00000423108 RUNDC1Q96C34 613 aa16.78■□□□□ 0.28
RPUSD3-203ENST00000423108 NWD2Q9ULI1 1742 aa16.76■□□□□ 0.27
RPUSD3-203ENST00000423108 FAM208AQ9UK61 1670 aaKnown RBP16.76■□□□□ 0.27
RPUSD3-203ENST00000423108 APAF1O14727 1248 aa16.76■□□□□ 0.27
RPUSD3-203ENST00000423108 TCP11L2Q8N4U5 519 aa16.76■□□□□ 0.27
RPUSD3-203ENST00000423108 RGS17Q9UGC6 210 aaPredicted RBP16.76■□□□□ 0.27
RPUSD3-203ENST00000423108 PHF23Q9BUL5 403 aaPredicted RBP16.75■□□□□ 0.27
RPUSD3-203ENST00000423108 CCDC9Q9Y3X0 531 aaKnown RBP16.75■□□□□ 0.27
RPUSD3-203ENST00000423108 ATRNO75882 1429 aa16.74■□□□□ 0.27
RPUSD3-203ENST00000423108 MTHFSDQ2M296 383 aaKnown RBP16.74■□□□□ 0.27
RPUSD3-203ENST00000423108 PNNQ9H307 717 aaKnown RBP16.74■□□□□ 0.27
RPUSD3-203ENST00000423108 QTRT2Q9H974 415 aaKnown RBP16.74■□□□□ 0.27
RPUSD3-203ENST00000423108 RRP7AQ9Y3A4 280 aaKnown RBP16.74■□□□□ 0.27
RPUSD3-203ENST00000423108 MEGF6O75095 1541 aa16.74■□□□□ 0.27
RPUSD3-203ENST00000423108 TATP17735 454 aaPredicted RBP16.73■□□□□ 0.27
RPUSD3-203ENST00000423108 RAPGEF4Q8WZA2 1011 aa16.73■□□□□ 0.27
RPUSD3-203ENST00000423108 TRPC5Q9UL62 973 aaPredicted RBP16.73■□□□□ 0.27
RPUSD3-203ENST00000423108 IL2RBP14784 551 aa16.72■□□□□ 0.27
RPUSD3-203ENST00000423108 TMPOP42166 694 aaKnown RBP16.72■□□□□ 0.27
RPUSD3-203ENST00000423108 GJD4Q96KN9 370 aaPredicted RBP16.72■□□□□ 0.27
RPUSD3-203ENST00000423108 DISP2A7MBM2 1401 aa16.71■□□□□ 0.27
RPUSD3-203ENST00000423108 NFE2L2Q16236 605 aa16.71■□□□□ 0.27
RPUSD3-203ENST00000423108 PLEKHO1Q53GL0 409 aaPredicted RBP16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 332.9 ms