RNA–Protein interactions for RNA: ENST00000421517.5

FAM3A-209, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 3

Gene FAM3A, Length 853 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-209ENST00000421517 LARP1Q6PKG0 1096 aaKnown RBP20.54■□□□□ 0.88
FAM3A-209ENST00000421517 KRT27Q7Z3Y8 459 aa20.54■□□□□ 0.88
FAM3A-209ENST00000421517 MYOM1P52179 1685 aa20.54■□□□□ 0.88
FAM3A-209ENST00000421517 AXIN2Q9Y2T1 843 aa20.53■□□□□ 0.88
FAM3A-209ENST00000421517 FYB1O15117 783 aa20.52■□□□□ 0.88
FAM3A-209ENST00000421517 ZRANB1Q9UGI0 708 aa20.52■□□□□ 0.88
FAM3A-209ENST00000421517 BLMP54132 1417 aaPredicted RBP20.52■□□□□ 0.87
FAM3A-209ENST00000421517 C11orf95C9JLR9 678 aaPredicted RBP20.51■□□□□ 0.87
FAM3A-209ENST00000421517 CDCA7Q9BWT1 371 aaPredicted RBP20.51■□□□□ 0.87
FAM3A-209ENST00000421517 EP400Q96L91 3159 aa20.5■□□□□ 0.87
FAM3A-209ENST00000421517 KIF24Q5T7B8 1368 aa20.49■□□□□ 0.87
FAM3A-209ENST00000421517 BRWD3Q6RI45 1802 aa20.49■□□□□ 0.87
FAM3A-209ENST00000421517 CARD10Q9BWT7 1032 aa20.49■□□□□ 0.87
FAM3A-209ENST00000421517 IP6K1Q92551 441 aa20.48■□□□□ 0.87
FAM3A-209ENST00000421517 CARD14Q9BXL6 1004 aa20.48■□□□□ 0.87
FAM3A-209ENST00000421517 ERBB3P21860 1342 aa20.48■□□□□ 0.87
FAM3A-209ENST00000421517 RTL1A6NKG5 1358 aa20.47■□□□□ 0.87
FAM3A-209ENST00000421517 CCDC7Q96M83 1385 aa20.47■□□□□ 0.87
FAM3A-209ENST00000421517 TOM1L2Q6ZVM7 507 aa20.47■□□□□ 0.87
FAM3A-209ENST00000421517 PARP4Q9UKK3 1724 aaKnown RBP20.46■□□□□ 0.87
FAM3A-209ENST00000421517 CGNL1Q0VF96 1302 aa20.46■□□□□ 0.87
FAM3A-209ENST00000421517 NSD3Q9BZ95 1437 aa20.45■□□□□ 0.86
FAM3A-209ENST00000421517 A0A0G2JS52 829 aa20.45■□□□□ 0.86
FAM3A-209ENST00000421517 MYT1Q01538 1121 aa20.45■□□□□ 0.86
FAM3A-209ENST00000421517 LTN1O94822 1766 aa20.44■□□□□ 0.86
FAM3A-209ENST00000421517 ZBTB7CA1YPR0 619 aa20.44■□□□□ 0.86
FAM3A-209ENST00000421517 SOX12O15370 315 aa20.44■□□□□ 0.86
FAM3A-209ENST00000421517 USP35Q9P2H5 1018 aa20.44■□□□□ 0.86
FAM3A-209ENST00000421517 FAM196AQ6ZSG2 479 aa20.43■□□□□ 0.86
FAM3A-209ENST00000421517 KIF20BQ96Q89 1820 aa20.42■□□□□ 0.86
FAM3A-209ENST00000421517 GGNBP2Q9H3C7 697 aa20.42■□□□□ 0.86
FAM3A-209ENST00000421517 MAP3K19Q56UN5 1328 aa20.42■□□□□ 0.86
FAM3A-209ENST00000421517 NSD2O96028 1365 aa20.42■□□□□ 0.86
FAM3A-209ENST00000421517 DISP2A7MBM2 1401 aa20.42■□□□□ 0.86
FAM3A-209ENST00000421517 CSB-PGBD3P0DP91 1061 aa20.41■□□□□ 0.86
FAM3A-209ENST00000421517 PDE3BQ13370 1112 aa20.41■□□□□ 0.86
FAM3A-209ENST00000421517 BCL9O00512 1426 aa20.41■□□□□ 0.86
FAM3A-209ENST00000421517 HOXC9P31274 260 aa20.4■□□□□ 0.86
FAM3A-209ENST00000421517 FAM208AQ9UK61 1670 aaKnown RBP20.4■□□□□ 0.86
FAM3A-209ENST00000421517 RGPD5Q99666 1765 aa20.39■□□□□ 0.86
FAM3A-209ENST00000421517 SF3B2Q13435 895 aaKnown RBP20.39■□□□□ 0.85
FAM3A-209ENST00000421517 ANKRD24Q8TF21 1146 aa20.39■□□□□ 0.85
FAM3A-209ENST00000421517 AMPHP49418 695 aa20.38■□□□□ 0.85
FAM3A-209ENST00000421517 DDB1Q16531 1140 aa20.38■□□□□ 0.85
FAM3A-209ENST00000421517 PANK3Q9H999 370 aa20.38■□□□□ 0.85
FAM3A-209ENST00000421517 KIF7Q2M1P5 1343 aa20.37■□□□□ 0.85
FAM3A-209ENST00000421517 WNK3Q9BYP7 1800 aa20.37■□□□□ 0.85
FAM3A-209ENST00000421517 FLT4P35916 1363 aa20.36■□□□□ 0.85
FAM3A-209ENST00000421517 INSRP06213 1382 aa20.35■□□□□ 0.85
FAM3A-209ENST00000421517 OVOS2A0A0G2JMS6 1433 aa20.35■□□□□ 0.85
FAM3A-209ENST00000421517 LRRC37A3O60309 1634 aa20.35■□□□□ 0.85
FAM3A-209ENST00000421517 RGPD1P0DJD0 1748 aa20.34■□□□□ 0.85
FAM3A-209ENST00000421517 POLR3GLQ9BT43 218 aa20.34■□□□□ 0.85
FAM3A-209ENST00000421517 EXOC5O00471 708 aa20.33■□□□□ 0.85
FAM3A-209ENST00000421517 IL2RBP14784 551 aa20.33■□□□□ 0.85
FAM3A-209ENST00000421517 BAG6P46379 1132 aa20.33■□□□□ 0.85
FAM3A-209ENST00000421517 NLRP2Q9NX02 1062 aa20.33■□□□□ 0.85
FAM3A-209ENST00000421517 SMG6Q86US8 1419 aaKnown RBP20.33■□□□□ 0.84
FAM3A-209ENST00000421517 ANKRD26Q9UPS8 1709 aa20.33■□□□□ 0.84
FAM3A-209ENST00000421517 RRS1Q15050 365 aaKnown RBP20.32■□□□□ 0.84
FAM3A-209ENST00000421517 TNS2Q63HR2 1409 aa20.32■□□□□ 0.84
FAM3A-209ENST00000421517 PARD3Q8TEW0 1356 aa20.32■□□□□ 0.84
FAM3A-209ENST00000421517 PEAK1Q9H792 1746 aa20.31■□□□□ 0.84
FAM3A-209ENST00000421517 KNSTRNQ9Y448 316 aa20.31■□□□□ 0.84
FAM3A-209ENST00000421517 WASHC2AQ641Q2 1341 aa20.3■□□□□ 0.84
FAM3A-209ENST00000421517 FBLN1P23142 703 aa20.3■□□□□ 0.84
FAM3A-209ENST00000421517 PER1O15534 1290 aaPredicted RBP20.28■□□□□ 0.84
FAM3A-209ENST00000421517 PLEKHG2Q9H7P9 1386 aa20.28■□□□□ 0.84
FAM3A-209ENST00000421517 NPC1L1Q9UHC9 1359 aa20.28■□□□□ 0.84
FAM3A-209ENST00000421517 FAM182BQ5T319 152 aa20.27■□□□□ 0.84
FAM3A-209ENST00000421517 MARCH10Q8NA82 808 aaPredicted RBP20.27■□□□□ 0.84
FAM3A-209ENST00000421517 POLKQ9UBT6 870 aa20.27■□□□□ 0.84
FAM3A-209ENST00000421517 TNS1Q9HBL0 1735 aaKnown RBP20.27■□□□□ 0.83
FAM3A-209ENST00000421517 HSP90AB2PQ58FF8 381 aa20.26■□□□□ 0.83
FAM3A-209ENST00000421517 AMER1Q5JTC6 1135 aaPredicted RBP20.26■□□□□ 0.83
FAM3A-209ENST00000421517 NCAPD2Q15021 1401 aa20.26■□□□□ 0.83
FAM3A-209ENST00000421517 EMILIN1Q9Y6C2 1016 aa20.25■□□□□ 0.83
FAM3A-209ENST00000421517 TRIM37O94972 964 aa20.24■□□□□ 0.83
FAM3A-209ENST00000421517 NBPF6Q5VWK0 638 aa20.24■□□□□ 0.83
FAM3A-209ENST00000421517 DEFB132Q7Z7B7 95 aa20.24■□□□□ 0.83
FAM3A-209ENST00000421517 NBPF4Q96M43 638 aa20.24■□□□□ 0.83
FAM3A-209ENST00000421517 BCL11BQ9C0K0 894 aaPredicted RBP20.24■□□□□ 0.83
FAM3A-209ENST00000421517 PLSCR1O15162 318 aa20.23■□□□□ 0.83
FAM3A-209ENST00000421517 LTV1Q96GA3 475 aaPredicted RBP20.23■□□□□ 0.83
FAM3A-209ENST00000421517 MORC1Q86VD1 984 aa20.22■□□□□ 0.83
FAM3A-209ENST00000421517 CAMKK2Q96RR4 588 aa20.22■□□□□ 0.83
FAM3A-209ENST00000421517 RGPD3A6NKT7 1758 aaPredicted RBP20.21■□□□□ 0.83
FAM3A-209ENST00000421517 RGPD4Q7Z3J3 1758 aa20.21■□□□□ 0.83
FAM3A-209ENST00000421517 MAP2P11137 1827 aaKnown RBP20.2■□□□□ 0.82
FAM3A-209ENST00000421517 APBA3O96018 575 aa20.2■□□□□ 0.82
FAM3A-209ENST00000421517 SBF2Q86WG5 1849 aa20.19■□□□□ 0.82
FAM3A-209ENST00000421517 EN1Q05925 392 aaPredicted RBP20.19■□□□□ 0.82
FAM3A-209ENST00000421517 RAPGEF4Q8WZA2 1011 aa20.19■□□□□ 0.82
FAM3A-209ENST00000421517 ZCRB1Q8TBF4 217 aaKnown RBP20.18■□□□□ 0.82
FAM3A-209ENST00000421517 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.17■□□□□ 0.82
FAM3A-209ENST00000421517 MEGF6O75095 1541 aa20.17■□□□□ 0.82
FAM3A-209ENST00000421517 PPM1GO15355 546 aaPredicted RBP20.16■□□□□ 0.82
FAM3A-209ENST00000421517 TATP17735 454 aaPredicted RBP20.16■□□□□ 0.82
FAM3A-209ENST00000421517 RGPD2P0DJD1 1756 aa20.14■□□□□ 0.81
FAM3A-209ENST00000421517 NHSQ6T4R5 1651 aa20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 1311.2 ms