RNA–Protein interactions for RNA: ENST00000417403.5

ABCA13-202, Transcript of ATP binding cassette subfamily A member 13, humanhuman

TSL 2

Gene ABCA13, Length 3,528 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA13-202ENST00000417403 TNNT2P45379 298 aaPredicted RBP9.03□□□□□ -0.96
ABCA13-202ENST00000417403 SENP3-EIF4A1A0A087X0R7 540 aa9.02□□□□□ -0.97
ABCA13-202ENST00000417403 PROSER2Q86WR7 435 aaPredicted RBP9.02□□□□□ -0.97
ABCA13-202ENST00000417403 KDRP35968 1356 aa9.02□□□□□ -0.97
ABCA13-202ENST00000417403 RRS1Q15050 365 aaKnown RBP9.01□□□□□ -0.97
ABCA13-202ENST00000417403 MAP3K19Q56UN5 1328 aa9.01□□□□□ -0.97
ABCA13-202ENST00000417403 DDX17Q92841 729 aaKnown RBP9.01□□□□□ -0.97
ABCA13-202ENST00000417403 RSPH6AQ9H0K4 717 aa9.01□□□□□ -0.97
ABCA13-202ENST00000417403 WNK3Q9BYP7 1800 aa9.01□□□□□ -0.97
ABCA13-202ENST00000417403 SBNO1A3KN83 1393 aa9.01□□□□□ -0.97
ABCA13-202ENST00000417403 BRINP3Q76B58 766 aa9□□□□□ -0.97
ABCA13-202ENST00000417403 FBXO3Q9UK99 471 aa9□□□□□ -0.97
ABCA13-202ENST00000417403 PKD1L3Q7Z443 1732 aa9□□□□□ -0.97
ABCA13-202ENST00000417403 KIF24Q5T7B8 1368 aa9□□□□□ -0.97
ABCA13-202ENST00000417403 CDCA7LQ96GN5 454 aa9□□□□□ -0.97
ABCA13-202ENST00000417403 TNS3Q68CZ2 1445 aa8.99□□□□□ -0.97
ABCA13-202ENST00000417403 SOS2Q07890 1332 aaPredicted RBP8.99□□□□□ -0.97
ABCA13-202ENST00000417403 NRAPQ86VF7 1730 aa8.99□□□□□ -0.97
ABCA13-202ENST00000417403 ESCO1Q5FWF5 840 aa8.98□□□□□ -0.97
ABCA13-202ENST00000417403 CCDC146Q8IYE0 955 aa8.98□□□□□ -0.97
ABCA13-202ENST00000417403 RTL1A6NKG5 1358 aa8.98□□□□□ -0.97
ABCA13-202ENST00000417403 EIF4A2Q14240 407 aaKnown RBP8.98□□□□□ -0.97
ABCA13-202ENST00000417403 TSHZ2Q9NRE2 1034 aa8.98□□□□□ -0.97
ABCA13-202ENST00000417403 TRIM35Q9UPQ4 493 aa8.98□□□□□ -0.97
ABCA13-202ENST00000417403 CENPBP07199 599 aaPredicted RBP8.98□□□□□ -0.97
ABCA13-202ENST00000417403 COG3Q96JB2 828 aa8.98□□□□□ -0.97
ABCA13-202ENST00000417403 MSH6P52701 1360 aa8.98□□□□□ -0.97
ABCA13-202ENST00000417403 FOXO3O43524 673 aa8.97□□□□□ -0.97
ABCA13-202ENST00000417403 HSP90AB2PQ58FF8 381 aa8.97□□□□□ -0.97
ABCA13-202ENST00000417403 DUSP27Q5VZP5 1158 aa8.97□□□□□ -0.97
ABCA13-202ENST00000417403 GLI3P10071 1580 aa8.97□□□□□ -0.97
ABCA13-202ENST00000417403 CCDC27Q2M243 656 aa8.97□□□□□ -0.97
ABCA13-202ENST00000417403 PHACTR3Q96KR7 559 aa8.97□□□□□ -0.97
ABCA13-202ENST00000417403 KDM3BQ7LBC6 1761 aa8.97□□□□□ -0.97
ABCA13-202ENST00000417403 FLT4P35916 1363 aa8.97□□□□□ -0.97
ABCA13-202ENST00000417403 NGDNQ8NEJ9 315 aaKnown RBP8.96□□□□□ -0.97
ABCA13-202ENST00000417403 SPATA31A3Q5VYP0 1347 aa8.96□□□□□ -0.97
ABCA13-202ENST00000417403 IGSF1Q8N6C5 1336 aa8.96□□□□□ -0.97
ABCA13-202ENST00000417403 PLCH1Q4KWH8 1693 aa8.96□□□□□ -0.97
ABCA13-202ENST00000417403 APAF1O14727 1248 aa8.96□□□□□ -0.98
ABCA13-202ENST00000417403 PHLPP1O60346 1717 aa8.96□□□□□ -0.98
ABCA13-202ENST00000417403 ARHGEF10O15013 1369 aa8.96□□□□□ -0.98
ABCA13-202ENST00000417403 HOXC9P31274 260 aa8.96□□□□□ -0.98
ABCA13-202ENST00000417403 XPCQ01831 940 aaPredicted RBP8.96□□□□□ -0.98
ABCA13-202ENST00000417403 CADPS2Q86UW7 1296 aa8.95□□□□□ -0.98
ABCA13-202ENST00000417403 WWC1Q8IX03 1113 aa8.95□□□□□ -0.98
ABCA13-202ENST00000417403 AXIN2Q9Y2T1 843 aa8.95□□□□□ -0.98
ABCA13-202ENST00000417403 PARP4Q9UKK3 1724 aaKnown RBP8.95□□□□□ -0.98
ABCA13-202ENST00000417403 SLFN5Q08AF3 891 aa8.94□□□□□ -0.98
ABCA13-202ENST00000417403 PAXIP1Q6ZW49 1069 aaPredicted RBP8.94□□□□□ -0.98
ABCA13-202ENST00000417403 ARHGEF25Q86VW2 580 aa8.94□□□□□ -0.98
ABCA13-202ENST00000417403 AEBP1Q8IUX7 1158 aa8.94□□□□□ -0.98
ABCA13-202ENST00000417403 RUNDC1Q96C34 613 aa8.94□□□□□ -0.98
ABCA13-202ENST00000417403 NUDCQ9Y266 331 aa8.94□□□□□ -0.98
ABCA13-202ENST00000417403 SCN11AQ9UI33 1791 aa8.94□□□□□ -0.98
ABCA13-202ENST00000417403 CPDO75976 1380 aa8.94□□□□□ -0.98
ABCA13-202ENST00000417403 DIAPH1O60610 1272 aaKnown RBP8.94□□□□□ -0.98
ABCA13-202ENST00000417403 NUTM2GQ5VZR2 741 aa8.94□□□□□ -0.98
ABCA13-202ENST00000417403 KRT28Q7Z3Y7 464 aa8.94□□□□□ -0.98
ABCA13-202ENST00000417403 TCP11L2Q8N4U5 519 aa8.94□□□□□ -0.98
ABCA13-202ENST00000417403 SLAIN2Q9P270 581 aa8.94□□□□□ -0.98
ABCA13-202ENST00000417403 ABTB2Q8N961 1025 aa8.93□□□□□ -0.98
ABCA13-202ENST00000417403 FCHSD2O94868 740 aa8.93□□□□□ -0.98
ABCA13-202ENST00000417403 NLRP6P59044 892 aa8.93□□□□□ -0.98
ABCA13-202ENST00000417403 TOGARAM1Q9Y4F4 1720 aa8.93□□□□□ -0.98
ABCA13-202ENST00000417403 PAPPAQ13219 1627 aa8.92□□□□□ -0.98
ABCA13-202ENST00000417403 GCP02774 474 aa8.92□□□□□ -0.98
ABCA13-202ENST00000417403 TMPOP42166 694 aaKnown RBP8.92□□□□□ -0.98
ABCA13-202ENST00000417403 WDR43Q15061 677 aaKnown RBP eCLIP8.92□□□□□ -0.98
ABCA13-202ENST00000417403 CRB1P82279 1406 aa8.92□□□□□ -0.98
ABCA13-202ENST00000417403 EYA1Q99502 592 aa8.92□□□□□ -0.98
ABCA13-202ENST00000417403 ATF3P18847 181 aa8.91□□□□□ -0.98
ABCA13-202ENST00000417403 PDE3BQ13370 1112 aa8.91□□□□□ -0.98
ABCA13-202ENST00000417403 IP6K1Q92551 441 aa8.91□□□□□ -0.98
ABCA13-202ENST00000417403 CFAP44Q96MT7 982 aa8.91□□□□□ -0.98
ABCA13-202ENST00000417403 COL14A1Q05707 1796 aaKnown RBP8.91□□□□□ -0.98
ABCA13-202ENST00000417403 N4BP2Q86UW6 1770 aaPredicted RBP8.91□□□□□ -0.98
ABCA13-202ENST00000417403 NPHP3Q7Z494 1330 aa8.91□□□□□ -0.98
ABCA13-202ENST00000417403 PSME1Q06323 249 aa8.91□□□□□ -0.98
ABCA13-202ENST00000417403 ZNF853P0CG23 659 aa8.9□□□□□ -0.98
ABCA13-202ENST00000417403 RRP7AQ9Y3A4 280 aaKnown RBP8.9□□□□□ -0.98
ABCA13-202ENST00000417403 COL5A2P05997 1499 aaPredicted RBP8.9□□□□□ -0.98
ABCA13-202ENST00000417403 U2AF1L5P0DN76 240 aaPredicted RBP8.9□□□□□ -0.99
ABCA13-202ENST00000417403 PRKAR2BP31323 418 aa8.9□□□□□ -0.99
ABCA13-202ENST00000417403 U2AF1Q01081 240 aaKnown RBP eCLIP8.9□□□□□ -0.99
ABCA13-202ENST00000417403 UBR2Q8IWV8 1755 aa8.9□□□□□ -0.99
ABCA13-202ENST00000417403 HMOX1P09601 288 aa8.89□□□□□ -0.99
ABCA13-202ENST00000417403 CFAP53Q96M91 514 aa8.89□□□□□ -0.99
ABCA13-202ENST00000417403 EP400Q96L91 3159 aa8.89□□□□□ -0.99
ABCA13-202ENST00000417403 NWD2Q9ULI1 1742 aa8.89□□□□□ -0.99
ABCA13-202ENST00000417403 MEGF6O75095 1541 aa8.89□□□□□ -0.99
ABCA13-202ENST00000417403 NBPF6Q5VWK0 638 aa8.89□□□□□ -0.99
ABCA13-202ENST00000417403 NBPF4Q96M43 638 aa8.89□□□□□ -0.99
ABCA13-202ENST00000417403 SALL2Q9Y467 1007 aaPredicted RBP8.89□□□□□ -0.99
ABCA13-202ENST00000417403 SUPT16HQ9Y5B9 1047 aaKnown RBP8.89□□□□□ -0.99
ABCA13-202ENST00000417403 NGEFQ8N5V2 710 aa8.88□□□□□ -0.99
ABCA13-202ENST00000417403 MRC1P22897 1456 aa8.88□□□□□ -0.99
ABCA13-202ENST00000417403 C5P01031 1676 aa8.88□□□□□ -0.99
ABCA13-202ENST00000417403 WDR63Q8IWG1 891 aa8.88□□□□□ -0.99
ABCA13-202ENST00000417403 ERBB3P21860 1342 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms