RNA–Protein interactions for RNA: ENST00000416889.6

SPG21-202, Transcript of SPG21, maspardin, humanhuman

TSL 2 BASIC

Gene SPG21, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG21-202ENST00000416889 ABCC6O95255 1503 aa30.29■■■□□ 2.44
SPG21-202ENST00000416889 NUTM2BA6NNL0 878 aaPredicted RBP30.28■■■□□ 2.44
SPG21-202ENST00000416889 NUTM2EB1AL46 878 aaPredicted RBP30.28■■■□□ 2.44
SPG21-202ENST00000416889 DIAPH1O60610 1272 aaKnown RBP30.28■■■□□ 2.44
SPG21-202ENST00000416889 NUTM2AQ8IVF1 878 aaPredicted RBP30.28■■■□□ 2.44
SPG21-202ENST00000416889 SPATA31A6Q5VVP1 1343 aa30.27■■■□□ 2.44
SPG21-202ENST00000416889 CHRNA2Q15822 529 aa30.27■■■□□ 2.44
SPG21-202ENST00000416889 PNISRQ8TF01 805 aaKnown RBP30.27■■■□□ 2.44
SPG21-202ENST00000416889 BLMP54132 1417 aaPredicted RBP30.26■■■□□ 2.43
SPG21-202ENST00000416889 NUDCQ9Y266 331 aa30.26■■■□□ 2.43
SPG21-202ENST00000416889 COL18A1P39060 1754 aa30.25■■■□□ 2.43
SPG21-202ENST00000416889 WDR43Q15061 677 aaKnown RBP eCLIP30.25■■■□□ 2.43
SPG21-202ENST00000416889 EIF4A2Q14240 407 aaKnown RBP30.23■■■□□ 2.43
SPG21-202ENST00000416889 ADAMTS2O95450 1211 aa30.22■■■□□ 2.43
SPG21-202ENST00000416889 FAM9BQ8IZU0 186 aa30.22■■■□□ 2.43
SPG21-202ENST00000416889 IL13P35225 146 aa30.22■■■□□ 2.43
SPG21-202ENST00000416889 COL14A1Q05707 1796 aaKnown RBP30.21■■■□□ 2.43
SPG21-202ENST00000416889 RGPD5Q99666 1765 aa30.21■■■□□ 2.43
SPG21-202ENST00000416889 LTV1Q96GA3 475 aaPredicted RBP30.21■■■□□ 2.43
SPG21-202ENST00000416889 AXIN2Q9Y2T1 843 aa30.21■■■□□ 2.43
SPG21-202ENST00000416889 U2SURPO15042 1029 aaKnown RBP30.2■■■□□ 2.42
SPG21-202ENST00000416889 LMO7Q8WWI1 1683 aa30.2■■■□□ 2.42
SPG21-202ENST00000416889 FAM83GA6ND36 823 aa30.19■■■□□ 2.42
SPG21-202ENST00000416889 ANKRD24Q8TF21 1146 aa30.17■■■□□ 2.42
SPG21-202ENST00000416889 CAMTA1Q9Y6Y1 1673 aa30.16■■■□□ 2.42
SPG21-202ENST00000416889 U2AF1L5P0DN76 240 aaPredicted RBP30.16■■■□□ 2.42
SPG21-202ENST00000416889 U2AF1Q01081 240 aaKnown RBP eCLIP30.16■■■□□ 2.42
SPG21-202ENST00000416889 LRP6O75581 1613 aa30.15■■■□□ 2.42
SPG21-202ENST00000416889 ADAMTS8Q9UP79 889 aa30.15■■■□□ 2.42
SPG21-202ENST00000416889 ERBB3P21860 1342 aa30.15■■■□□ 2.42
SPG21-202ENST00000416889 PLCH1Q4KWH8 1693 aa30.12■■■□□ 2.41
SPG21-202ENST00000416889 RGPD1P0DJD0 1748 aa30.12■■■□□ 2.41
SPG21-202ENST00000416889 CSB-PGBD3P0DP91 1061 aa30.12■■■□□ 2.41
SPG21-202ENST00000416889 BTG4Q9NY30 223 aa30.12■■■□□ 2.41
SPG21-202ENST00000416889 COL5A2P05997 1499 aaPredicted RBP30.11■■■□□ 2.41
SPG21-202ENST00000416889 FAM208AQ9UK61 1670 aaKnown RBP30.1■■■□□ 2.41
SPG21-202ENST00000416889 EYA1Q99502 592 aa30.1■■■□□ 2.41
SPG21-202ENST00000416889 MEX3CQ5U5Q3 659 aaKnown RBP30.09■■■□□ 2.41
SPG21-202ENST00000416889 IGSF1Q8N6C5 1336 aa30.09■■■□□ 2.41
SPG21-202ENST00000416889 EVA1CP58658 441 aa30.08■■■□□ 2.41
SPG21-202ENST00000416889 C8orf37Q96NL8 207 aa30.07■■■□□ 2.4
SPG21-202ENST00000416889 STRN4Q9NRL3 753 aa30.07■■■□□ 2.4
SPG21-202ENST00000416889 RGPD2P0DJD1 1756 aa30.07■■■□□ 2.4
SPG21-202ENST00000416889 HMOX1P09601 288 aa30.06■■■□□ 2.4
SPG21-202ENST00000416889 WDR17Q8IZU2 1322 aa30.06■■■□□ 2.4
SPG21-202ENST00000416889 NWD2Q9ULI1 1742 aa30.06■■■□□ 2.4
SPG21-202ENST00000416889 NBPF6Q5VWK0 638 aa30.05■■■□□ 2.4
SPG21-202ENST00000416889 SULT6B1Q6IMI4 303 aa30.05■■■□□ 2.4
SPG21-202ENST00000416889 NGLY1Q96IV0 654 aa30.05■■■□□ 2.4
SPG21-202ENST00000416889 NBPF4Q96M43 638 aa30.05■■■□□ 2.4
SPG21-202ENST00000416889 NLRP2Q9NX02 1062 aa30.05■■■□□ 2.4
SPG21-202ENST00000416889 SLIT2O94813 1529 aa30.04■■■□□ 2.4
SPG21-202ENST00000416889 FCHSD2O94868 740 aa30.04■■■□□ 2.4
SPG21-202ENST00000416889 PNNQ9H307 717 aaKnown RBP30.04■■■□□ 2.4
SPG21-202ENST00000416889 NRAPQ86VF7 1730 aa30.03■■■□□ 2.4
SPG21-202ENST00000416889 AEBP1Q8IUX7 1158 aa30.02■■■□□ 2.4
SPG21-202ENST00000416889 USHBP1Q8N6Y0 703 aa30.02■■■□□ 2.4
SPG21-202ENST00000416889 RSPH6AQ9H0K4 717 aa30.02■■■□□ 2.4
SPG21-202ENST00000416889 TOM1L2Q6ZVM7 507 aa30.01■■■□□ 2.4
SPG21-202ENST00000416889 CCDC146Q8IYE0 955 aa30.01■■■□□ 2.4
SPG21-202ENST00000416889 KDRP35968 1356 aa30.01■■■□□ 2.39
SPG21-202ENST00000416889 LARP1Q6PKG0 1096 aaKnown RBP30■■■□□ 2.39
SPG21-202ENST00000416889 PRKAR2BP31323 418 aa29.99■■■□□ 2.39
SPG21-202ENST00000416889 NCAPD2Q15021 1401 aa29.99■■■□□ 2.39
SPG21-202ENST00000416889 CRB1P82279 1406 aa29.98■■■□□ 2.39
SPG21-202ENST00000416889 RUNDC1Q96C34 613 aa29.98■■■□□ 2.39
SPG21-202ENST00000416889 NEFMP07197 916 aa29.97■■■□□ 2.39
SPG21-202ENST00000416889 FNBP4Q8N3X1 1017 aaPredicted RBP29.97■■■□□ 2.39
SPG21-202ENST00000416889 MAPK8IP3Q9UPT6 1336 aa29.96■■■□□ 2.39
SPG21-202ENST00000416889 UNC5CLQ8IV45 518 aa29.96■■■□□ 2.39
SPG21-202ENST00000416889 PLEKHF1Q96S99 279 aa29.96■■■□□ 2.39
SPG21-202ENST00000416889 CARD10Q9BWT7 1032 aa29.96■■■□□ 2.39
SPG21-202ENST00000416889 YTHDC1Q96MU7 727 aaKnown RBP29.95■■■□□ 2.38
SPG21-202ENST00000416889 BCL9LQ86UU0 1499 aa29.93■■■□□ 2.38
SPG21-202ENST00000416889 USP21Q9UK80 565 aa29.92■■■□□ 2.38
SPG21-202ENST00000416889 TNKS1BP1Q9C0C2 1729 aaKnown RBP29.92■■■□□ 2.38
SPG21-202ENST00000416889 AFF2P51816 1311 aa29.92■■■□□ 2.38
SPG21-202ENST00000416889 HNRNPUQ00839 825 aaKnown RBP eCLIP29.91■■■□□ 2.38
SPG21-202ENST00000416889 RAPGEF4Q8WZA2 1011 aa29.9■■■□□ 2.38
SPG21-202ENST00000416889 APAF1O14727 1248 aa29.89■■■□□ 2.38
SPG21-202ENST00000416889 USP35Q9P2H5 1018 aa29.89■■■□□ 2.38
SPG21-202ENST00000416889 PHACTR3Q96KR7 559 aa29.88■■■□□ 2.37
SPG21-202ENST00000416889 CCDC9Q9Y3X0 531 aaKnown RBP29.88■■■□□ 2.37
SPG21-202ENST00000416889 TCP11L2Q8N4U5 519 aa29.87■■■□□ 2.37
SPG21-202ENST00000416889 TATP17735 454 aaPredicted RBP29.86■■■□□ 2.37
SPG21-202ENST00000416889 VPS72Q15906 364 aa29.86■■■□□ 2.37
SPG21-202ENST00000416889 SENP3-EIF4A1A0A087X0R7 540 aa29.86■■■□□ 2.37
SPG21-202ENST00000416889 SPATA31A1Q5TZJ5 1347 aa29.85■■■□□ 2.37
SPG21-202ENST00000416889 SPATA31A5Q5VU36 1347 aa29.85■■■□□ 2.37
SPG21-202ENST00000416889 SPATA31A7Q8IWB4 1347 aa29.85■■■□□ 2.37
SPG21-202ENST00000416889 MEGF6O75095 1541 aa29.84■■■□□ 2.37
SPG21-202ENST00000416889 PARP4Q9UKK3 1724 aaKnown RBP29.84■■■□□ 2.37
SPG21-202ENST00000416889 PLEKHG2Q9H7P9 1386 aa29.82■■■□□ 2.36
SPG21-202ENST00000416889 IL2RBP14784 551 aa29.82■■■□□ 2.36
SPG21-202ENST00000416889 TMPOP42166 694 aaKnown RBP29.81■■■□□ 2.36
SPG21-202ENST00000416889 NFE2L2Q16236 605 aa29.81■■■□□ 2.36
SPG21-202ENST00000416889 PLEKHO1Q53GL0 409 aaPredicted RBP29.81■■■□□ 2.36
SPG21-202ENST00000416889 THRAP3Q9Y2W1 955 aaKnown RBP29.81■■■□□ 2.36
SPG21-202ENST00000416889 RRP7AQ9Y3A4 280 aaKnown RBP29.81■■■□□ 2.36
SPG21-202ENST00000416889 GAS2L2Q8NHY3 880 aa29.81■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms