RNA–Protein interactions for RNA: ENST00000414419.6

RFFL-204, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-204ENST00000414419 TOM1L2Q6ZVM7 507 aa15.59■□□□□ 0.09
RFFL-204ENST00000414419 THRAP3Q9Y2W1 955 aaKnown RBP15.59■□□□□ 0.09
RFFL-204ENST00000414419 EP400Q96L91 3159 aa15.59■□□□□ 0.09
RFFL-204ENST00000414419 LTN1O94822 1766 aa15.58■□□□□ 0.08
RFFL-204ENST00000414419 CSB-PGBD3P0DP91 1061 aa15.58■□□□□ 0.08
RFFL-204ENST00000414419 BARGINQ6ZT62 677 aa15.58■□□□□ 0.08
RFFL-204ENST00000414419 COG3Q96JB2 828 aa15.58■□□□□ 0.08
RFFL-204ENST00000414419 CRB1P82279 1406 aa15.58■□□□□ 0.08
RFFL-204ENST00000414419 THSD7AQ9UPZ6 1657 aa15.57■□□□□ 0.08
RFFL-204ENST00000414419 POLR3GLQ9BT43 218 aa15.57■□□□□ 0.08
RFFL-204ENST00000414419 AXIN2Q9Y2T1 843 aa15.57■□□□□ 0.08
RFFL-204ENST00000414419 NFAT5O94916 1531 aa15.57■□□□□ 0.08
RFFL-204ENST00000414419 PDE3BQ13370 1112 aa15.56■□□□□ 0.08
RFFL-204ENST00000414419 WDR17Q8IZU2 1322 aa15.56■□□□□ 0.08
RFFL-204ENST00000414419 BLMP54132 1417 aaPredicted RBP15.56■□□□□ 0.08
RFFL-204ENST00000414419 HSPA5P11021 654 aaKnown RBP15.55■□□□□ 0.08
RFFL-204ENST00000414419 ABCC6O95255 1503 aa15.53■□□□□ 0.08
RFFL-204ENST00000414419 OVOS2A0A0J9YW53 1432 aa15.53■□□□□ 0.08
RFFL-204ENST00000414419 OVOS2Q6IE36 1432 aa15.53■□□□□ 0.08
RFFL-204ENST00000414419 FAM182BQ5T319 152 aa15.53■□□□□ 0.08
RFFL-204ENST00000414419 KIF20BQ96Q89 1820 aa15.52■□□□□ 0.08
RFFL-204ENST00000414419 MYOM1P52179 1685 aa15.52■□□□□ 0.08
RFFL-204ENST00000414419 FAM196AQ6ZSG2 479 aa15.52■□□□□ 0.08
RFFL-204ENST00000414419 PARP4Q9UKK3 1724 aaKnown RBP15.51■□□□□ 0.07
RFFL-204ENST00000414419 FYB1O15117 783 aa15.51■□□□□ 0.07
RFFL-204ENST00000414419 CDCA7Q9BWT1 371 aaPredicted RBP15.51■□□□□ 0.07
RFFL-204ENST00000414419 CARD10Q9BWT7 1032 aa15.51■□□□□ 0.07
RFFL-204ENST00000414419 GGNBP2Q9H3C7 697 aa15.51■□□□□ 0.07
RFFL-204ENST00000414419 BAG6P46379 1132 aa15.5■□□□□ 0.07
RFFL-204ENST00000414419 AMPHP49418 695 aa15.5■□□□□ 0.07
RFFL-204ENST00000414419 RGPD1P0DJD0 1748 aa15.5■□□□□ 0.07
RFFL-204ENST00000414419 DDB1Q16531 1140 aa15.49■□□□□ 0.07
RFFL-204ENST00000414419 NLRP2Q9NX02 1062 aa15.49■□□□□ 0.07
RFFL-204ENST00000414419 WNK3Q9BYP7 1800 aa15.49■□□□□ 0.07
RFFL-204ENST00000414419 CCDC7Q96M83 1385 aa15.49■□□□□ 0.07
RFFL-204ENST00000414419 ERBB3P21860 1342 aa15.48■□□□□ 0.07
RFFL-204ENST00000414419 DEFB132Q7Z7B7 95 aa15.48■□□□□ 0.07
RFFL-204ENST00000414419 ANKRD24Q8TF21 1146 aa15.48■□□□□ 0.07
RFFL-204ENST00000414419 IP6K1Q92551 441 aa15.48■□□□□ 0.07
RFFL-204ENST00000414419 NSD3Q9BZ95 1437 aa15.48■□□□□ 0.07
RFFL-204ENST00000414419 C11orf95C9JLR9 678 aaPredicted RBP15.47■□□□□ 0.07
RFFL-204ENST00000414419 LTV1Q96GA3 475 aaPredicted RBP15.47■□□□□ 0.07
RFFL-204ENST00000414419 CARD14Q9BXL6 1004 aa15.47■□□□□ 0.07
RFFL-204ENST00000414419 MAP3K19Q56UN5 1328 aa15.46■□□□□ 0.07
RFFL-204ENST00000414419 TRIM37O94972 964 aa15.46■□□□□ 0.07
RFFL-204ENST00000414419 CGNL1Q0VF96 1302 aa15.45■□□□□ 0.06
RFFL-204ENST00000414419 KAT6BQ8WYB5 2073 aa15.45■□□□□ 0.06
RFFL-204ENST00000414419 EXOC5O00471 708 aa15.45■□□□□ 0.06
RFFL-204ENST00000414419 FBLN1P23142 703 aa15.45■□□□□ 0.06
RFFL-204ENST00000414419 HOXC9P31274 260 aa15.45■□□□□ 0.06
RFFL-204ENST00000414419 FAM208AQ9UK61 1670 aaKnown RBP15.44■□□□□ 0.06
RFFL-204ENST00000414419 LRRC37A3O60309 1634 aa15.44■□□□□ 0.06
RFFL-204ENST00000414419 RRS1Q15050 365 aaKnown RBP15.44■□□□□ 0.06
RFFL-204ENST00000414419 OVOS2A0A0G2JMS6 1433 aa15.43■□□□□ 0.06
RFFL-204ENST00000414419 TNS1Q9HBL0 1735 aaKnown RBP15.43■□□□□ 0.06
RFFL-204ENST00000414419 RTL1A6NKG5 1358 aa15.42■□□□□ 0.06
RFFL-204ENST00000414419 APBA3O96018 575 aa15.42■□□□□ 0.06
RFFL-204ENST00000414419 IL2RBP14784 551 aa15.42■□□□□ 0.06
RFFL-204ENST00000414419 EN1Q05925 392 aaPredicted RBP15.42■□□□□ 0.06
RFFL-204ENST00000414419 PANK3Q9H999 370 aa15.42■□□□□ 0.06
RFFL-204ENST00000414419 MAP2P11137 1827 aaKnown RBP15.42■□□□□ 0.06
RFFL-204ENST00000414419 SBF2Q86WG5 1849 aa15.41■□□□□ 0.06
RFFL-204ENST00000414419 DISP2A7MBM2 1401 aa15.41■□□□□ 0.06
RFFL-204ENST00000414419 SMG6Q86US8 1419 aaKnown RBP15.41■□□□□ 0.06
RFFL-204ENST00000414419 RGPD2P0DJD1 1756 aa15.4■□□□□ 0.06
RFFL-204ENST00000414419 PPM1GO15355 546 aaPredicted RBP15.39■□□□□ 0.05
RFFL-204ENST00000414419 MARCH10Q8NA82 808 aaPredicted RBP15.39■□□□□ 0.05
RFFL-204ENST00000414419 ANKRD26Q9UPS8 1709 aa15.39■□□□□ 0.05
RFFL-204ENST00000414419 FLT4P35916 1363 aa15.38■□□□□ 0.05
RFFL-204ENST00000414419 KIF24Q5T7B8 1368 aa15.38■□□□□ 0.05
RFFL-204ENST00000414419 PEAK1Q9H792 1746 aa15.38■□□□□ 0.05
RFFL-204ENST00000414419 TNS2Q63HR2 1409 aa15.37■□□□□ 0.05
RFFL-204ENST00000414419 EZH2Q15910 746 aaKnown RBP15.37■□□□□ 0.05
RFFL-204ENST00000414419 HSP90AB2PQ58FF8 381 aa15.37■□□□□ 0.05
RFFL-204ENST00000414419 KNSTRNQ9Y448 316 aa15.37■□□□□ 0.05
RFFL-204ENST00000414419 INSRP06213 1382 aa15.36■□□□□ 0.05
RFFL-204ENST00000414419 TNNT2P45379 298 aaPredicted RBP15.36■□□□□ 0.05
RFFL-204ENST00000414419 EMILIN1Q9Y6C2 1016 aa15.36■□□□□ 0.05
RFFL-204ENST00000414419 KIF7Q2M1P5 1343 aa15.36■□□□□ 0.05
RFFL-204ENST00000414419 PARD3Q8TEW0 1356 aa15.36■□□□□ 0.05
RFFL-204ENST00000414419 CAMKK2Q96RR4 588 aa15.35■□□□□ 0.05
RFFL-204ENST00000414419 BCL11BQ9C0K0 894 aaPredicted RBP15.35■□□□□ 0.05
RFFL-204ENST00000414419 NSD2O96028 1365 aa15.35■□□□□ 0.05
RFFL-204ENST00000414419 NBPF6Q5VWK0 638 aa15.34■□□□□ 0.05
RFFL-204ENST00000414419 RAPGEF4Q8WZA2 1011 aa15.34■□□□□ 0.05
RFFL-204ENST00000414419 NBPF4Q96M43 638 aa15.34■□□□□ 0.05
RFFL-204ENST00000414419 BCL9O00512 1426 aa15.34■□□□□ 0.05
RFFL-204ENST00000414419 MORC1Q86VD1 984 aa15.33■□□□□ 0.04
RFFL-204ENST00000414419 USHBP1Q8N6Y0 703 aa15.33■□□□□ 0.04
RFFL-204ENST00000414419 DDX54Q8TDD1 881 aaKnown RBP15.33■□□□□ 0.04
RFFL-204ENST00000414419 POLKQ9UBT6 870 aa15.32■□□□□ 0.04
RFFL-204ENST00000414419 WASHC2AQ641Q2 1341 aa15.32■□□□□ 0.04
RFFL-204ENST00000414419 PLSCR1O15162 318 aa15.31■□□□□ 0.04
RFFL-204ENST00000414419 TATP17735 454 aaPredicted RBP15.31■□□□□ 0.04
RFFL-204ENST00000414419 NBPF14Q5TI25 921 aa15.31■□□□□ 0.04
RFFL-204ENST00000414419 ZCRB1Q8TBF4 217 aaKnown RBP15.31■□□□□ 0.04
RFFL-204ENST00000414419 ACSBG1Q96GR2 724 aa15.31■□□□□ 0.04
RFFL-204ENST00000414419 PSDA5PKW4 1024 aaPredicted RBP15.3■□□□□ 0.04
RFFL-204ENST00000414419 RGPD3A6NKT7 1758 aaPredicted RBP15.29■□□□□ 0.04
RFFL-204ENST00000414419 RGPD4Q7Z3J3 1758 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 122.1 ms