RNA–Protein interactions for RNA: ENST00000412507.1

TRIM56-202, Transcript of tripartite motif containing 56, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TRIM56, Length 1,129 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-202ENST00000412507 EP400Q96L91 3159 aa26.27■■□□□ 1.8
TRIM56-202ENST00000412507 LARP1Q6PKG0 1096 aaKnown RBP26.27■■□□□ 1.8
TRIM56-202ENST00000412507 USP35Q9P2H5 1018 aa26.26■■□□□ 1.79
TRIM56-202ENST00000412507 OVOS2A0A0J9YW53 1432 aa26.25■■□□□ 1.79
TRIM56-202ENST00000412507 OVOS2Q6IE36 1432 aa26.25■■□□□ 1.79
TRIM56-202ENST00000412507 AXIN2Q9Y2T1 843 aa26.24■■□□□ 1.79
TRIM56-202ENST00000412507 WNK3Q9BYP7 1800 aa26.23■■□□□ 1.79
TRIM56-202ENST00000412507 KRT27Q7Z3Y8 459 aa26.22■■□□□ 1.79
TRIM56-202ENST00000412507 POLR3GLQ9BT43 218 aa26.21■■□□□ 1.79
TRIM56-202ENST00000412507 ABCC6O95255 1503 aa26.2■■□□□ 1.79
TRIM56-202ENST00000412507 CRB1P82279 1406 aa26.2■■□□□ 1.78
TRIM56-202ENST00000412507 PARP4Q9UKK3 1724 aaKnown RBP26.19■■□□□ 1.78
TRIM56-202ENST00000412507 TCP11L2Q8N4U5 519 aa26.18■■□□□ 1.78
TRIM56-202ENST00000412507 COG3Q96JB2 828 aa26.18■■□□□ 1.78
TRIM56-202ENST00000412507 BARGINQ6ZT62 677 aa26.17■■□□□ 1.78
TRIM56-202ENST00000412507 WDR17Q8IZU2 1322 aa26.16■■□□□ 1.78
TRIM56-202ENST00000412507 TOM1L2Q6ZVM7 507 aa26.16■■□□□ 1.78
TRIM56-202ENST00000412507 FYB1O15117 783 aa26.15■■□□□ 1.78
TRIM56-202ENST00000412507 CARD14Q9BXL6 1004 aa26.15■■□□□ 1.78
TRIM56-202ENST00000412507 THRAP3Q9Y2W1 955 aaKnown RBP26.15■■□□□ 1.78
TRIM56-202ENST00000412507 NSD3Q9BZ95 1437 aa26.14■■□□□ 1.78
TRIM56-202ENST00000412507 GGNBP2Q9H3C7 697 aa26.14■■□□□ 1.78
TRIM56-202ENST00000412507 FAM182BQ5T319 152 aa26.13■■□□□ 1.77
TRIM56-202ENST00000412507 CSB-PGBD3P0DP91 1061 aa26.12■■□□□ 1.77
TRIM56-202ENST00000412507 RGPD2P0DJD1 1756 aa26.11■■□□□ 1.77
TRIM56-202ENST00000412507 FBLN1P23142 703 aa26.11■■□□□ 1.77
TRIM56-202ENST00000412507 CCDC125Q86Z20 511 aa26.11■■□□□ 1.77
TRIM56-202ENST00000412507 RGPD1P0DJD0 1748 aa26.11■■□□□ 1.77
TRIM56-202ENST00000412507 C11orf95C9JLR9 678 aaPredicted RBP26.1■■□□□ 1.77
TRIM56-202ENST00000412507 ANKRD26Q9UPS8 1709 aa26.1■■□□□ 1.77
TRIM56-202ENST00000412507 LRRC37A3O60309 1634 aa26.1■■□□□ 1.77
TRIM56-202ENST00000412507 MAP2P11137 1827 aaKnown RBP26.09■■□□□ 1.77
TRIM56-202ENST00000412507 BLMP54132 1417 aaPredicted RBP26.09■■□□□ 1.77
TRIM56-202ENST00000412507 FAM208AQ9UK61 1670 aaKnown RBP26.08■■□□□ 1.77
TRIM56-202ENST00000412507 CARD10Q9BWT7 1032 aa26.07■■□□□ 1.76
TRIM56-202ENST00000412507 ERBB3P21860 1342 aa26.07■■□□□ 1.76
TRIM56-202ENST00000412507 TNS1Q9HBL0 1735 aaKnown RBP26.06■■□□□ 1.76
TRIM56-202ENST00000412507 PDE3BQ13370 1112 aa26.06■■□□□ 1.76
TRIM56-202ENST00000412507 MAP3K19Q56UN5 1328 aa26.06■■□□□ 1.76
TRIM56-202ENST00000412507 ANKRD24Q8TF21 1146 aa26.05■■□□□ 1.76
TRIM56-202ENST00000412507 IP6K1Q92551 441 aa26.05■■□□□ 1.76
TRIM56-202ENST00000412507 SBF2Q86WG5 1849 aa26.04■■□□□ 1.76
TRIM56-202ENST00000412507 AMPHP49418 695 aa26.03■■□□□ 1.76
TRIM56-202ENST00000412507 RRS1Q15050 365 aaKnown RBP26.03■■□□□ 1.76
TRIM56-202ENST00000412507 PEAK1Q9H792 1746 aa26.02■■□□□ 1.76
TRIM56-202ENST00000412507 SF3B2Q13435 895 aaKnown RBP26.02■■□□□ 1.76
TRIM56-202ENST00000412507 NLRP2Q9NX02 1062 aa26.02■■□□□ 1.76
TRIM56-202ENST00000412507 CCDC7Q96M83 1385 aa26.02■■□□□ 1.76
TRIM56-202ENST00000412507 HOXC9P31274 260 aa26.01■■□□□ 1.75
TRIM56-202ENST00000412507 CGNL1Q0VF96 1302 aa26.01■■□□□ 1.75
TRIM56-202ENST00000412507 PANK3Q9H999 370 aa26.01■■□□□ 1.75
TRIM56-202ENST00000412507 DISP2A7MBM2 1401 aa26■■□□□ 1.75
TRIM56-202ENST00000412507 DDB1Q16531 1140 aa26■■□□□ 1.75
TRIM56-202ENST00000412507 FAM196AQ6ZSG2 479 aa26■■□□□ 1.75
TRIM56-202ENST00000412507 DEFB132Q7Z7B7 95 aa26■■□□□ 1.75
TRIM56-202ENST00000412507 LTV1Q96GA3 475 aaPredicted RBP26■■□□□ 1.75
TRIM56-202ENST00000412507 KIF7Q2M1P5 1343 aa25.98■■□□□ 1.75
TRIM56-202ENST00000412507 CDCA7Q9BWT1 371 aaPredicted RBP25.98■■□□□ 1.75
TRIM56-202ENST00000412507 KAT6BQ8WYB5 2073 aa25.98■■□□□ 1.75
TRIM56-202ENST00000412507 RTL1A6NKG5 1358 aa25.97■■□□□ 1.75
TRIM56-202ENST00000412507 TRIM37O94972 964 aa25.94■■□□□ 1.74
TRIM56-202ENST00000412507 OVOS2A0A0G2JMS6 1433 aa25.93■■□□□ 1.74
TRIM56-202ENST00000412507 BAG6P46379 1132 aa25.92■■□□□ 1.74
TRIM56-202ENST00000412507 EXOC5O00471 708 aa25.91■■□□□ 1.74
TRIM56-202ENST00000412507 MARCH10Q8NA82 808 aaPredicted RBP25.91■■□□□ 1.74
TRIM56-202ENST00000412507 EMILIN1Q9Y6C2 1016 aa25.91■■□□□ 1.74
TRIM56-202ENST00000412507 FLT4P35916 1363 aa25.91■■□□□ 1.74
TRIM56-202ENST00000412507 IL2RBP14784 551 aa25.9■■□□□ 1.74
TRIM56-202ENST00000412507 TNS2Q63HR2 1409 aa25.89■■□□□ 1.74
TRIM56-202ENST00000412507 HSP90AB2PQ58FF8 381 aa25.89■■□□□ 1.74
TRIM56-202ENST00000412507 KIF24Q5T7B8 1368 aa25.89■■□□□ 1.74
TRIM56-202ENST00000412507 INSRP06213 1382 aa25.88■■□□□ 1.73
TRIM56-202ENST00000412507 EN1Q05925 392 aaPredicted RBP25.88■■□□□ 1.73
TRIM56-202ENST00000412507 SMG6Q86US8 1419 aaKnown RBP25.88■■□□□ 1.73
TRIM56-202ENST00000412507 TNNT2P45379 298 aaPredicted RBP25.87■■□□□ 1.73
TRIM56-202ENST00000412507 SHANK3Q9BYB0 1731 aa25.86■■□□□ 1.73
TRIM56-202ENST00000412507 PPM1GO15355 546 aaPredicted RBP25.86■■□□□ 1.73
TRIM56-202ENST00000412507 KNSTRNQ9Y448 316 aa25.86■■□□□ 1.73
TRIM56-202ENST00000412507 NSD2O96028 1365 aa25.85■■□□□ 1.73
TRIM56-202ENST00000412507 APBA3O96018 575 aa25.85■■□□□ 1.73
TRIM56-202ENST00000412507 NBPF6Q5VWK0 638 aa25.85■■□□□ 1.73
TRIM56-202ENST00000412507 NBPF4Q96M43 638 aa25.85■■□□□ 1.73
TRIM56-202ENST00000412507 POLKQ9UBT6 870 aa25.84■■□□□ 1.73
TRIM56-202ENST00000412507 WASHC2AQ641Q2 1341 aa25.84■■□□□ 1.73
TRIM56-202ENST00000412507 USHBP1Q8N6Y0 703 aa25.83■■□□□ 1.73
TRIM56-202ENST00000412507 RREB1Q92766 1687 aa25.83■■□□□ 1.73
TRIM56-202ENST00000412507 BCL9O00512 1426 aa25.81■■□□□ 1.72
TRIM56-202ENST00000412507 EZH2Q15910 746 aaKnown RBP25.81■■□□□ 1.72
TRIM56-202ENST00000412507 NHSQ6T4R5 1651 aa25.8■■□□□ 1.72
TRIM56-202ENST00000412507 MEGF6O75095 1541 aa25.8■■□□□ 1.72
TRIM56-202ENST00000412507 MORC1Q86VD1 984 aa25.8■■□□□ 1.72
TRIM56-202ENST00000412507 RGPD3A6NKT7 1758 aaPredicted RBP25.79■■□□□ 1.72
TRIM56-202ENST00000412507 RGPD4Q7Z3J3 1758 aa25.79■■□□□ 1.72
TRIM56-202ENST00000412507 CAMKK2Q96RR4 588 aa25.79■■□□□ 1.72
TRIM56-202ENST00000412507 NUP188Q5SRE5 1749 aa25.79■■□□□ 1.72
TRIM56-202ENST00000412507 AMER1Q5JTC6 1135 aaPredicted RBP25.78■■□□□ 1.72
TRIM56-202ENST00000412507 PTF1AQ7RTS3 328 aa25.78■■□□□ 1.72
TRIM56-202ENST00000412507 BTAF1O14981 1849 aa25.77■■□□□ 1.72
TRIM56-202ENST00000412507 PER1O15534 1290 aaPredicted RBP25.76■■□□□ 1.71
TRIM56-202ENST00000412507 BCL11BQ9C0K0 894 aaPredicted RBP25.76■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms