RNA–Protein interactions for RNA: ENST00000409953.5

UBE2F-204, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 3 BASIC

Gene UBE2F, Length 924 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-204ENST00000409953 ALS2Q96Q42 1657 aa11.05□□□□□ -0.64
UBE2F-204ENST00000409953 TRPM3Q9HCF6 1732 aaPredicted RBP11.04□□□□□ -0.64
UBE2F-204ENST00000409953 RGPD8O14715 1765 aaPredicted RBP11.04□□□□□ -0.64
UBE2F-204ENST00000409953 EVA1CP58658 441 aa11.04□□□□□ -0.64
UBE2F-204ENST00000409953 MLLT1Q03111 559 aaPredicted RBP11.04□□□□□ -0.64
UBE2F-204ENST00000409953 PMFBP1Q8TBY8 1022 aa11.04□□□□□ -0.64
UBE2F-204ENST00000409953 PAPPAQ13219 1627 aa11.03□□□□□ -0.64
UBE2F-204ENST00000409953 LARP1Q6PKG0 1096 aaKnown RBP11.03□□□□□ -0.64
UBE2F-204ENST00000409953 RBM46Q8TBY0 533 aaKnown RBP11.03□□□□□ -0.64
UBE2F-204ENST00000409953 COL24A1Q17RW2 1714 aa11.03□□□□□ -0.64
UBE2F-204ENST00000409953 PLEKHH1Q9ULM0 1364 aa11.03□□□□□ -0.64
UBE2F-204ENST00000409953 KIAA1210Q9ULL0 1709 aa11.02□□□□□ -0.65
UBE2F-204ENST00000409953 ZNF827Q17R98 1081 aa11.02□□□□□ -0.65
UBE2F-204ENST00000409953 SLC16A10Q8TF71 515 aa11.02□□□□□ -0.65
UBE2F-204ENST00000409953 THRAP3Q9Y2W1 955 aaKnown RBP11.02□□□□□ -0.65
UBE2F-204ENST00000409953 CLTCL1P53675 1640 aa11.02□□□□□ -0.65
UBE2F-204ENST00000409953 USP19O94966 1318 aa11.01□□□□□ -0.65
UBE2F-204ENST00000409953 LRRC37A3O60309 1634 aa11.01□□□□□ -0.65
UBE2F-204ENST00000409953 NMRK2Q9NPI5 230 aa11□□□□□ -0.65
UBE2F-204ENST00000409953 STK26Q9P289 416 aa11□□□□□ -0.65
UBE2F-204ENST00000409953 IFT172Q9UG01 1749 aa11□□□□□ -0.65
UBE2F-204ENST00000409953 VGFO15240 615 aaPredicted RBP10.99□□□□□ -0.65
UBE2F-204ENST00000409953 FSTL1Q12841 308 aa10.99□□□□□ -0.65
UBE2F-204ENST00000409953 ZC3H6P61129 1189 aaKnown RBP10.98□□□□□ -0.65
UBE2F-204ENST00000409953 DDB1Q16531 1140 aa10.98□□□□□ -0.65
UBE2F-204ENST00000409953 C16orf71Q8IYS4 520 aaPredicted RBP10.98□□□□□ -0.65
UBE2F-204ENST00000409953 FKBP8Q14318 412 aa10.97□□□□□ -0.65
UBE2F-204ENST00000409953 GPRASP1Q5JY77 1395 aa10.97□□□□□ -0.65
UBE2F-204ENST00000409953 BCL9O00512 1426 aa10.97□□□□□ -0.65
UBE2F-204ENST00000409953 PHRF1Q9P1Y6 1649 aaKnown RBP10.97□□□□□ -0.65
UBE2F-204ENST00000409953 ABHD8Q96I13 439 aa10.96□□□□□ -0.65
UBE2F-204ENST00000409953 PNPLA7Q6ZV29 1317 aa10.95□□□□□ -0.66
UBE2F-204ENST00000409953 MARCH10Q8NA82 808 aaPredicted RBP10.95□□□□□ -0.66
UBE2F-204ENST00000409953 ACIN1Q9UKV3 1341 aaKnown RBP10.94□□□□□ -0.66
UBE2F-204ENST00000409953 PAK3O75914 559 aaPredicted RBP10.94□□□□□ -0.66
UBE2F-204ENST00000409953 KANK4Q5T7N3 995 aaPredicted RBP10.94□□□□□ -0.66
UBE2F-204ENST00000409953 PRDM10Q9NQV6 1147 aa10.94□□□□□ -0.66
UBE2F-204ENST00000409953 QSER1Q2KHR3 1735 aa10.94□□□□□ -0.66
UBE2F-204ENST00000409953 KNDC1Q76NI1 1749 aa10.94□□□□□ -0.66
UBE2F-204ENST00000409953 LMO7Q8WWI1 1683 aa10.93□□□□□ -0.66
UBE2F-204ENST00000409953 FOXN1O15353 648 aa10.93□□□□□ -0.66
UBE2F-204ENST00000409953 RGS19P49795 217 aa10.93□□□□□ -0.66
UBE2F-204ENST00000409953 AKT1S1Q96B36 256 aa10.93□□□□□ -0.66
UBE2F-204ENST00000409953 AKAP12Q02952 1782 aa10.93□□□□□ -0.66
UBE2F-204ENST00000409953 ABCC11Q96J66 1382 aa10.92□□□□□ -0.66
UBE2F-204ENST00000409953 CD2APQ9Y5K6 639 aa10.92□□□□□ -0.66
UBE2F-204ENST00000409953 CRB1P82279 1406 aa10.92□□□□□ -0.66
UBE2F-204ENST00000409953 ANKARQ7Z5J8 1434 aa10.92□□□□□ -0.66
UBE2F-204ENST00000409953 NUP155O75694 1391 aa10.91□□□□□ -0.66
UBE2F-204ENST00000409953 LRRC4BQ9NT99 713 aa10.91□□□□□ -0.66
UBE2F-204ENST00000409953 DAXXQ9UER7 740 aaPredicted RBP10.91□□□□□ -0.66
UBE2F-204ENST00000409953 COL5A2P05997 1499 aaPredicted RBP10.91□□□□□ -0.66
UBE2F-204ENST00000409953 KIF1BO60333 1816 aa10.91□□□□□ -0.66
UBE2F-204ENST00000409953 CICQ96RK0 1608 aaPredicted RBP10.9□□□□□ -0.66
UBE2F-204ENST00000409953 PDE4DIPQ5VU43 2346 aa10.9□□□□□ -0.67
UBE2F-204ENST00000409953 IGSF1Q8N6C5 1336 aa10.89□□□□□ -0.67
UBE2F-204ENST00000409953 NHSQ6T4R5 1651 aa10.89□□□□□ -0.67
UBE2F-204ENST00000409953 TUBGCP6Q96RT7 1819 aa10.89□□□□□ -0.67
UBE2F-204ENST00000409953 CCDC85CA6NKD9 419 aa10.89□□□□□ -0.67
UBE2F-204ENST00000409953 TFCP2L1Q9NZI6 479 aa10.89□□□□□ -0.67
UBE2F-204ENST00000409953 BRD4O60885 1362 aaPredicted RBP10.89□□□□□ -0.67
UBE2F-204ENST00000409953 ANKRD30BQ9BXX2 1392 aa10.89□□□□□ -0.67
UBE2F-204ENST00000409953 MSL1Q68DK7 614 aa10.88□□□□□ -0.67
UBE2F-204ENST00000409953 SMC1BQ8NDV3 1235 aa10.88□□□□□ -0.67
UBE2F-204ENST00000409953 SPDYE4A6NLX3 237 aa10.87□□□□□ -0.67
UBE2F-204ENST00000409953 NUTM2GQ5VZR2 741 aa10.87□□□□□ -0.67
UBE2F-204ENST00000409953 TMEM132EQ6IEE7 984 aa10.87□□□□□ -0.67
UBE2F-204ENST00000409953 PPLO60437 1756 aa10.87□□□□□ -0.67
UBE2F-204ENST00000409953 CPDO75976 1380 aa10.87□□□□□ -0.67
UBE2F-204ENST00000409953 RPGRIP1LQ68CZ1 1315 aa10.86□□□□□ -0.67
UBE2F-204ENST00000409953 WNK3Q9BYP7 1800 aa10.86□□□□□ -0.67
UBE2F-204ENST00000409953 CTCFP49711 727 aaPredicted RBP10.86□□□□□ -0.67
UBE2F-204ENST00000409953 ACSBG1Q96GR2 724 aa10.86□□□□□ -0.67
UBE2F-204ENST00000409953 HIRIP3Q9BW71 556 aaPredicted RBP10.86□□□□□ -0.67
UBE2F-204ENST00000409953 C10orf71Q711Q0 1435 aa10.85□□□□□ -0.67
UBE2F-204ENST00000409953 YTHDC2Q9H6S0 1430 aaKnown RBP10.85□□□□□ -0.67
UBE2F-204ENST00000409953 SAFB2Q14151 953 aaKnown RBP eCLIP10.84□□□□□ -0.67
UBE2F-204ENST00000409953 NGDNQ8NEJ9 315 aaKnown RBP10.84□□□□□ -0.67
UBE2F-204ENST00000409953 AIDAQ96BJ3 306 aa10.84□□□□□ -0.67
UBE2F-204ENST00000409953 BTAF1O14981 1849 aa10.84□□□□□ -0.67
UBE2F-204ENST00000409953 VPS8Q8N3P4 1428 aa10.84□□□□□ -0.67
UBE2F-204ENST00000409953 TOM1L2Q6ZVM7 507 aa10.83□□□□□ -0.68
UBE2F-204ENST00000409953 CDCA7Q9BWT1 371 aaPredicted RBP10.83□□□□□ -0.68
UBE2F-204ENST00000409953 KCPQ6ZWJ8 1503 aa10.83□□□□□ -0.68
UBE2F-204ENST00000409953 USP6P35125 1406 aa10.83□□□□□ -0.68
UBE2F-204ENST00000409953 ADGRF5Q8IZF2 1346 aa10.83□□□□□ -0.68
UBE2F-204ENST00000409953 LBX1P52954 281 aa10.82□□□□□ -0.68
UBE2F-204ENST00000409953 SLC27A3Q5K4L6 730 aa10.82□□□□□ -0.68
UBE2F-204ENST00000409953 MKRN1Q9UHC7 482 aaKnown RBP10.82□□□□□ -0.68
UBE2F-204ENST00000409953 TRPM1Q7Z4N2 1603 aa10.82□□□□□ -0.68
UBE2F-204ENST00000409953 KDM2BQ8NHM5 1336 aa10.82□□□□□ -0.68
UBE2F-204ENST00000409953 PRR36Q9H6K5 1346 aa10.82□□□□□ -0.68
UBE2F-204ENST00000409953 PXDNLA1KZ92 1463 aa10.81□□□□□ -0.68
UBE2F-204ENST00000409953 PLEKHG2Q9H7P9 1386 aa10.81□□□□□ -0.68
UBE2F-204ENST00000409953 SIRT1Q96EB6 747 aa10.81□□□□□ -0.68
UBE2F-204ENST00000409953 RRAGCQ9HB90 399 aa10.81□□□□□ -0.68
UBE2F-204ENST00000409953 TNRC18O15417 2968 aaPredicted RBP10.8□□□□□ -0.68
UBE2F-204ENST00000409953 COL23A1Q86Y22 540 aaPredicted RBP10.8□□□□□ -0.68
UBE2F-204ENST00000409953 CFAP44Q96MT7 982 aa10.8□□□□□ -0.68
UBE2F-204ENST00000409953 TNRC6CQ9HCJ0 1690 aaKnown RBP10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms