RNA–Protein interactions for RNA: ENST00000409952.3

LSM5-205, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-205ENST00000409952 GPR37L1O60883 481 aa8.12□□□□□ -1.11
LSM5-205ENST00000409952 FAM174AQ8TBP5 190 aa8.11□□□□□ -1.11
LSM5-205ENST00000409952 MTMR7Q9Y216 660 aa8.11□□□□□ -1.11
LSM5-205ENST00000409952 MFAP1P55081 439 aaKnown RBP8.1□□□□□ -1.11
LSM5-205ENST00000409952 CTC1Q2NKJ3 1217 aa8.1□□□□□ -1.11
LSM5-205ENST00000409952 GZF1Q9H116 711 aaPredicted RBP8.1□□□□□ -1.11
LSM5-205ENST00000409952 SNRKQ9NRH2 765 aa8.1□□□□□ -1.11
LSM5-205ENST00000409952 TLL2Q9Y6L7 1015 aa8.1□□□□□ -1.11
LSM5-205ENST00000409952 MAP4K5Q9Y4K4 846 aa8.09□□□□□ -1.11
LSM5-205ENST00000409952 ALDH1A1P00352 501 aa8.08□□□□□ -1.12
LSM5-205ENST00000409952 GRM5P41594 1212 aa8.08□□□□□ -1.12
LSM5-205ENST00000409952 ERFEQ4G0M1 354 aa8.08□□□□□ -1.12
LSM5-205ENST00000409952 HPS1Q92902 700 aa8.08□□□□□ -1.12
LSM5-205ENST00000409952 ADH1CP00326 375 aa8.07□□□□□ -1.12
LSM5-205ENST00000409952 PTK2Q05397 1052 aa8.07□□□□□ -1.12
LSM5-205ENST00000409952 IRF5Q13568 498 aa8.07□□□□□ -1.12
LSM5-205ENST00000409952 PNMA1Q8ND90 353 aa8.07□□□□□ -1.12
LSM5-205ENST00000409952 KLF16Q9BXK1 252 aaPredicted RBP8.07□□□□□ -1.12
LSM5-205ENST00000409952 COG6Q9Y2V7 657 aa8.07□□□□□ -1.12
LSM5-205ENST00000409952 PPP1R15AO75807 674 aaPredicted RBP8.06□□□□□ -1.12
LSM5-205ENST00000409952 PDE4CQ08493 712 aa8.06□□□□□ -1.12
LSM5-205ENST00000409952 ARHGAP9Q9BRR9 750 aa8.06□□□□□ -1.12
LSM5-205ENST00000409952 AGERQ15109 404 aa8.05□□□□□ -1.12
LSM5-205ENST00000409952 PATL2C9JE40 543 aaKnown RBP8.04□□□□□ -1.12
LSM5-205ENST00000409952 NR5A1Q13285 461 aa8.04□□□□□ -1.12
LSM5-205ENST00000409952 ADAM32Q8TC27 787 aa8.04□□□□□ -1.12
LSM5-205ENST00000409952 ZNF330Q9Y3S2 320 aaPredicted RBP8.04□□□□□ -1.12
LSM5-205ENST00000409952 MAGEB6P1A0A0J9YX57 407 aa8.03□□□□□ -1.12
LSM5-205ENST00000409952 LOC105371045A0A1W2PR82 267 aa8.03□□□□□ -1.12
LSM5-205ENST00000409952 RBM25P49756 843 aaKnown RBP8.03□□□□□ -1.12
LSM5-205ENST00000409952 NNTQ13423 1086 aa8.03□□□□□ -1.12
LSM5-205ENST00000409952 FOXD4L5Q5VV16 416 aaPredicted RBP8.03□□□□□ -1.12
LSM5-205ENST00000409952 FOXD4L4Q8WXT5 416 aaPredicted RBP8.03□□□□□ -1.12
LSM5-205ENST00000409952 NDUFB9Q9Y6M9 179 aa8.03□□□□□ -1.12
LSM5-205ENST00000409952 WASF2Q9Y6W5 498 aa8.03□□□□□ -1.12
LSM5-205ENST00000409952 AXIN1O15169 862 aa8.02□□□□□ -1.13
LSM5-205ENST00000409952 NR3C2P08235 984 aa8.02□□□□□ -1.13
LSM5-205ENST00000409952 CDV3Q9UKY7 258 aaKnown RBP8.02□□□□□ -1.13
LSM5-205ENST00000409952 ZBBXA8MT70 800 aa8.01□□□□□ -1.13
LSM5-205ENST00000409952 CARD14Q9BXL6 1004 aa8.01□□□□□ -1.13
LSM5-205ENST00000409952 IGSF3O75054 1194 aa8□□□□□ -1.13
LSM5-205ENST00000409952 FBXO45P0C2W1 286 aa8□□□□□ -1.13
LSM5-205ENST00000409952 TIMP2P16035 220 aa8□□□□□ -1.13
LSM5-205ENST00000409952 ZBTB33Q86T24 672 aa8□□□□□ -1.13
LSM5-205ENST00000409952 GMPR2Q9P2T1 348 aaKnown RBP8□□□□□ -1.13
LSM5-205ENST00000409952 ACIN1Q9UKV3 1341 aaKnown RBP8□□□□□ -1.13
LSM5-205ENST00000409952 ESPNB1AK53 854 aa7.99□□□□□ -1.13
LSM5-205ENST00000409952 NR1H3Q13133 447 aa7.99□□□□□ -1.13
LSM5-205ENST00000409952 VASH1Q7L8A9 365 aaPredicted RBP7.99□□□□□ -1.13
LSM5-205ENST00000409952 SLC10A4Q96EP9 437 aa7.99□□□□□ -1.13
LSM5-205ENST00000409952 ARID5BQ14865 1188 aa7.98□□□□□ -1.13
LSM5-205ENST00000409952 WWC1Q8IX03 1113 aa7.98□□□□□ -1.13
LSM5-205ENST00000409952 ZNF428Q96B54 188 aa7.98□□□□□ -1.13
LSM5-205ENST00000409952 KCTD15Q96SI1 283 aaPredicted RBP7.98□□□□□ -1.13
LSM5-205ENST00000409952 TBC1D2BQ9UPU7 963 aa7.98□□□□□ -1.13
LSM5-205ENST00000409952 E9PSI1 815 aa7.97□□□□□ -1.13
LSM5-205ENST00000409952 CAPN5O15484 640 aaPredicted RBP7.97□□□□□ -1.13
LSM5-205ENST00000409952 FSHRP23945 695 aa7.97□□□□□ -1.13
LSM5-205ENST00000409952 ATP13A2Q9NQ11 1180 aa7.97□□□□□ -1.13
LSM5-205ENST00000409952 SHROOM4Q9ULL8 1493 aa7.96□□□□□ -1.13
LSM5-205ENST00000409952 WDR4P57081 412 aaKnown RBP7.96□□□□□ -1.14
LSM5-205ENST00000409952 KCNA1Q09470 495 aa7.96□□□□□ -1.14
LSM5-205ENST00000409952 LCE2AQ5TA79 106 aaPredicted RBP7.96□□□□□ -1.14
LSM5-205ENST00000409952 TREML4Q6UXN2 200 aa7.96□□□□□ -1.14
LSM5-205ENST00000409952 MCCD1P59942 119 aaPredicted RBP7.95□□□□□ -1.14
LSM5-205ENST00000409952 NBPF20Q3BBV1 942 aa7.95□□□□□ -1.14
LSM5-205ENST00000409952 INTS6LQ5JSJ4 861 aaKnown RBP7.95□□□□□ -1.14
LSM5-205ENST00000409952 TRIM46Q7Z4K8 759 aa7.95□□□□□ -1.14
LSM5-205ENST00000409952 CCDC116Q8IYX3 515 aa7.95□□□□□ -1.14
LSM5-205ENST00000409952 ITPKCQ96DU7 683 aa7.95□□□□□ -1.14
LSM5-205ENST00000409952 CALR3Q96L12 384 aaKnown RBP7.95□□□□□ -1.14
LSM5-205ENST00000409952 SNRPBP14678 240 aaKnown RBP7.94□□□□□ -1.14
LSM5-205ENST00000409952 PPP1R26Q5T8A7 1209 aaPredicted RBP7.94□□□□□ -1.14
LSM5-205ENST00000409952 DZIP3Q86Y13 1208 aaKnown RBP7.94□□□□□ -1.14
LSM5-205ENST00000409952 SEPT12Q8IYM1 358 aa7.94□□□□□ -1.14
LSM5-205ENST00000409952 EMILIN1Q9Y6C2 1016 aa7.94□□□□□ -1.14
LSM5-205ENST00000409952 LOC100996750A0A140TA64 210 aa7.93□□□□□ -1.14
LSM5-205ENST00000409952 ZIC2O95409 532 aaPredicted RBP7.93□□□□□ -1.14
LSM5-205ENST00000409952 BRD1O95696 1058 aa7.93□□□□□ -1.14
LSM5-205ENST00000409952 KRTAP4-6Q9BYQ5 205 aa7.93□□□□□ -1.14
LSM5-205ENST00000409952 ZFAND3Q9H8U3 227 aa7.93□□□□□ -1.14
LSM5-205ENST00000409952 GDPD2Q9HCC8 539 aa7.93□□□□□ -1.14
LSM5-205ENST00000409952 PRM3Q9NNZ6 103 aa7.93□□□□□ -1.14
LSM5-205ENST00000409952 DHX9Q08211 1270 aaKnown RBP7.92□□□□□ -1.14
LSM5-205ENST00000409952 Q6ZVU0 165 aa7.92□□□□□ -1.14
LSM5-205ENST00000409952 MEIOBQ8N635 442 aa7.92□□□□□ -1.14
LSM5-205ENST00000409952 GLMNQ92990 594 aa7.92□□□□□ -1.14
LSM5-205ENST00000409952 TRIM47Q96LD4 638 aa7.92□□□□□ -1.14
LSM5-205ENST00000409952 STK17AQ9UEE5 414 aa7.92□□□□□ -1.14
LSM5-205ENST00000409952 USTQ9Y2C2 406 aa7.92□□□□□ -1.14
LSM5-205ENST00000409952 LCE2CQ5TA81 110 aa7.91□□□□□ -1.14
LSM5-205ENST00000409952 CCDC125Q86Z20 511 aa7.91□□□□□ -1.14
LSM5-205ENST00000409952 ZNF592Q92610 1267 aa7.91□□□□□ -1.14
LSM5-205ENST00000409952 C11orf95C9JLR9 678 aaPredicted RBP7.9□□□□□ -1.14
LSM5-205ENST00000409952 GIGYF1O75420 1035 aaPredicted RBP7.9□□□□□ -1.14
LSM5-205ENST00000409952 MRPL14Q6P1L8 145 aaKnown RBP7.9□□□□□ -1.14
LSM5-205ENST00000409952 PBXIP1Q96AQ6 731 aa7.9□□□□□ -1.14
LSM5-205ENST00000409952 SENP2Q9HC62 589 aa7.9□□□□□ -1.14
LSM5-205ENST00000409952 AMOTL2Q9Y2J4 779 aa7.9□□□□□ -1.14
LSM5-205ENST00000409952 PCDHB9Q9Y5E1 797 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms