RNA–Protein interactions for RNA: ENST00000409739.2

TRAF3IP1-203, Transcript of TRAF3 interacting protein 1, humanhuman

TSL 3

Gene TRAF3IP1, Length 1,070 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-203ENST00000409739 FYB1O15117 783 aa43.15■■■■■ 4.5
TRAF3IP1-203ENST00000409739 EVA1CP58658 441 aa43.14■■■■■ 4.5
TRAF3IP1-203ENST00000409739 SPATA31A1Q5TZJ5 1347 aa43.13■■■■■ 4.49
TRAF3IP1-203ENST00000409739 ANKRD26Q9UPS8 1709 aa43.12■■■■■ 4.49
TRAF3IP1-203ENST00000409739 KIF7Q2M1P5 1343 aa43.12■■■■■ 4.49
TRAF3IP1-203ENST00000409739 LARP1Q6PKG0 1096 aaKnown RBP43.11■■■■■ 4.49
TRAF3IP1-203ENST00000409739 GGNBP2Q9H3C7 697 aa43.11■■■■■ 4.49
TRAF3IP1-203ENST00000409739 AXIN2Q9Y2T1 843 aa43.11■■■■■ 4.49
TRAF3IP1-203ENST00000409739 ONECUT3O60422 494 aaPredicted RBP43.1■■■■■ 4.49
TRAF3IP1-203ENST00000409739 FAM98CQ17RN3 349 aaKnown RBP43.08■■■■■ 4.49
TRAF3IP1-203ENST00000409739 WNK3Q9BYP7 1800 aa43.08■■■■■ 4.49
TRAF3IP1-203ENST00000409739 SEPT12Q8IYM1 358 aa43.07■■■■■ 4.49
TRAF3IP1-203ENST00000409739 CRB1P82279 1406 aa43.05■■■■■ 4.48
TRAF3IP1-203ENST00000409739 EP400Q96L91 3159 aa43.04■■■■■ 4.48
TRAF3IP1-203ENST00000409739 PANK3Q9H999 370 aa43.03■■■■■ 4.48
TRAF3IP1-203ENST00000409739 USP35Q9P2H5 1018 aa43.01■■■■■ 4.48
TRAF3IP1-203ENST00000409739 CGNL1Q0VF96 1302 aa43■■■■■ 4.47
TRAF3IP1-203ENST00000409739 WDR17Q8IZU2 1322 aa43■■■■■ 4.47
TRAF3IP1-203ENST00000409739 A0A0G2JS52 829 aa42.99■■■■■ 4.47
TRAF3IP1-203ENST00000409739 MYT1Q01538 1121 aa42.99■■■■■ 4.47
TRAF3IP1-203ENST00000409739 FBLN1P23142 703 aa42.97■■■■■ 4.47
TRAF3IP1-203ENST00000409739 PARP4Q9UKK3 1724 aaKnown RBP42.97■■■■■ 4.47
TRAF3IP1-203ENST00000409739 FAM208AQ9UK61 1670 aaKnown RBP42.96■■■■■ 4.47
TRAF3IP1-203ENST00000409739 CCDC7Q96M83 1385 aa42.96■■■■■ 4.47
TRAF3IP1-203ENST00000409739 TCP11L2Q8N4U5 519 aa42.96■■■■■ 4.47
TRAF3IP1-203ENST00000409739 MAP3K19Q56UN5 1328 aa42.96■■■■■ 4.47
TRAF3IP1-203ENST00000409739 BARGINQ6ZT62 677 aa42.95■■■■■ 4.47
TRAF3IP1-203ENST00000409739 BLMP54132 1417 aaPredicted RBP42.95■■■■■ 4.47
TRAF3IP1-203ENST00000409739 MAP2P11137 1827 aaKnown RBP42.94■■■■■ 4.46
TRAF3IP1-203ENST00000409739 PEAK1Q9H792 1746 aa42.94■■■■■ 4.46
TRAF3IP1-203ENST00000409739 TOM1L2Q6ZVM7 507 aa42.93■■■■■ 4.46
TRAF3IP1-203ENST00000409739 UPF1Q92900 1129 aaKnown RBP eCLIP42.93■■■■■ 4.46
TRAF3IP1-203ENST00000409739 THRAP3Q9Y2W1 955 aaKnown RBP42.92■■■■■ 4.46
TRAF3IP1-203ENST00000409739 ERBB3P21860 1342 aa42.92■■■■■ 4.46
TRAF3IP1-203ENST00000409739 WASHC2AQ641Q2 1341 aa42.91■■■■■ 4.46
TRAF3IP1-203ENST00000409739 CSB-PGBD3P0DP91 1061 aa42.9■■■■■ 4.46
TRAF3IP1-203ENST00000409739 IP6K1Q92551 441 aa42.9■■■■■ 4.46
TRAF3IP1-203ENST00000409739 RRS1Q15050 365 aaKnown RBP42.89■■■■■ 4.46
TRAF3IP1-203ENST00000409739 RTL1A6NKG5 1358 aa42.89■■■■■ 4.46
TRAF3IP1-203ENST00000409739 RGPD2P0DJD1 1756 aa42.88■■■■■ 4.46
TRAF3IP1-203ENST00000409739 KRT27Q7Z3Y8 459 aa42.88■■■■■ 4.45
TRAF3IP1-203ENST00000409739 LRRC37A3O60309 1634 aa42.87■■■■■ 4.45
TRAF3IP1-203ENST00000409739 HOXC9P31274 260 aa42.85■■■■■ 4.45
TRAF3IP1-203ENST00000409739 NSD2O96028 1365 aa42.84■■■■■ 4.45
TRAF3IP1-203ENST00000409739 AMPHP49418 695 aa42.84■■■■■ 4.45
TRAF3IP1-203ENST00000409739 ANKRD24Q8TF21 1146 aa42.84■■■■■ 4.45
TRAF3IP1-203ENST00000409739 CARD10Q9BWT7 1032 aa42.83■■■■■ 4.45
TRAF3IP1-203ENST00000409739 KNSTRNQ9Y448 316 aa42.78■■■■■ 4.44
TRAF3IP1-203ENST00000409739 DISP2A7MBM2 1401 aa42.78■■■■■ 4.44
TRAF3IP1-203ENST00000409739 KIF24Q5T7B8 1368 aa42.78■■■■■ 4.44
TRAF3IP1-203ENST00000409739 FLT4P35916 1363 aa42.76■■■■■ 4.44
TRAF3IP1-203ENST00000409739 NLRP2Q9NX02 1062 aa42.75■■■■■ 4.43
TRAF3IP1-203ENST00000409739 LTV1Q96GA3 475 aaPredicted RBP42.74■■■■■ 4.43
TRAF3IP1-203ENST00000409739 EMILIN1Q9Y6C2 1016 aa42.73■■■■■ 4.43
TRAF3IP1-203ENST00000409739 AMER1Q5JTC6 1135 aaPredicted RBP42.7■■■■■ 4.43
TRAF3IP1-203ENST00000409739 FAM182BQ5T319 152 aa42.7■■■■■ 4.43
TRAF3IP1-203ENST00000409739 INSRP06213 1382 aa42.69■■■■■ 4.42
TRAF3IP1-203ENST00000409739 PER1O15534 1290 aaPredicted RBP42.69■■■■■ 4.42
TRAF3IP1-203ENST00000409739 RGPD1P0DJD0 1748 aa42.68■■■■■ 4.42
TRAF3IP1-203ENST00000409739 CDCA7Q9BWT1 371 aaPredicted RBP42.68■■■■■ 4.42
TRAF3IP1-203ENST00000409739 TNNT2P45379 298 aaPredicted RBP42.67■■■■■ 4.42
TRAF3IP1-203ENST00000409739 SMG6Q86US8 1419 aaKnown RBP42.66■■■■■ 4.42
TRAF3IP1-203ENST00000409739 PDE3BQ13370 1112 aa42.66■■■■■ 4.42
TRAF3IP1-203ENST00000409739 HSP90AB2PQ58FF8 381 aa42.66■■■■■ 4.42
TRAF3IP1-203ENST00000409739 TNS1Q9HBL0 1735 aaKnown RBP42.64■■■■■ 4.42
TRAF3IP1-203ENST00000409739 POLKQ9UBT6 870 aa42.64■■■■■ 4.42
TRAF3IP1-203ENST00000409739 DDB1Q16531 1140 aa42.63■■■■■ 4.41
TRAF3IP1-203ENST00000409739 MORC1Q86VD1 984 aa42.62■■■■■ 4.41
TRAF3IP1-203ENST00000409739 SBF2Q86WG5 1849 aa42.62■■■■■ 4.41
TRAF3IP1-203ENST00000409739 PPM1GO15355 546 aaPredicted RBP42.61■■■■■ 4.41
TRAF3IP1-203ENST00000409739 CCDC125Q86Z20 511 aa42.61■■■■■ 4.41
TRAF3IP1-203ENST00000409739 TNS2Q63HR2 1409 aa42.61■■■■■ 4.41
TRAF3IP1-203ENST00000409739 ZEB1P37275 1124 aaPredicted RBP42.58■■■■■ 4.41
TRAF3IP1-203ENST00000409739 IL2RBP14784 551 aa42.57■■■■■ 4.41
TRAF3IP1-203ENST00000409739 FAM196AQ6ZSG2 479 aa42.56■■■■■ 4.4
TRAF3IP1-203ENST00000409739 OVOS2A0A0G2JMS6 1433 aa42.54■■■■■ 4.4
TRAF3IP1-203ENST00000409739 NPC1L1Q9UHC9 1359 aa42.54■■■■■ 4.4
TRAF3IP1-203ENST00000409739 NBPF6Q5VWK0 638 aa42.54■■■■■ 4.4
TRAF3IP1-203ENST00000409739 NBPF4Q96M43 638 aa42.54■■■■■ 4.4
TRAF3IP1-203ENST00000409739 SHANK3Q9BYB0 1731 aa42.54■■■■■ 4.4
TRAF3IP1-203ENST00000409739 CC2D1BQ5T0F9 858 aaKnown RBP42.51■■■■■ 4.4
TRAF3IP1-203ENST00000409739 MEGF6O75095 1541 aa42.5■■■■■ 4.39
TRAF3IP1-203ENST00000409739 EXOC5O00471 708 aa42.49■■■■■ 4.39
TRAF3IP1-203ENST00000409739 USHBP1Q8N6Y0 703 aa42.48■■■■■ 4.39
TRAF3IP1-203ENST00000409739 MARCH10Q8NA82 808 aaPredicted RBP42.48■■■■■ 4.39
TRAF3IP1-203ENST00000409739 NCAPD2Q15021 1401 aa42.46■■■■■ 4.39
TRAF3IP1-203ENST00000409739 SF3B2Q13435 895 aaKnown RBP42.46■■■■■ 4.39
TRAF3IP1-203ENST00000409739 BCL9O00512 1426 aa42.43■■■■■ 4.38
TRAF3IP1-203ENST00000409739 TRIM37O94972 964 aa42.42■■■■■ 4.38
TRAF3IP1-203ENST00000409739 EIF4A2Q14240 407 aaKnown RBP42.4■■■■■ 4.38
TRAF3IP1-203ENST00000409739 DEFB132Q7Z7B7 95 aa42.4■■■■■ 4.38
TRAF3IP1-203ENST00000409739 PKD1L3Q7Z443 1732 aa42.38■■■■■ 4.38
TRAF3IP1-203ENST00000409739 KAT6BQ8WYB5 2073 aa42.37■■■■■ 4.37
TRAF3IP1-203ENST00000409739 CNGB1Q14028 1251 aaPredicted RBP42.37■■■■■ 4.37
TRAF3IP1-203ENST00000409739 NHSQ6T4R5 1651 aa42.36■■■■■ 4.37
TRAF3IP1-203ENST00000409739 EYA1Q99502 592 aa42.35■■■■■ 4.37
TRAF3IP1-203ENST00000409739 BAG6P46379 1132 aa42.34■■■■■ 4.37
TRAF3IP1-203ENST00000409739 RAPGEF4Q8WZA2 1011 aa42.34■■■■■ 4.37
TRAF3IP1-203ENST00000409739 TATP17735 454 aaPredicted RBP42.29■■■■■ 4.36
TRAF3IP1-203ENST00000409739 MTHFSP49914 203 aa42.29■■■■■ 4.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms