RNA–Protein interactions for RNA: ENST00000409704.6

ITM2C-204, Transcript of integral membrane protein 2C, humanhuman

TSL 5 BASIC

Gene ITM2C, Length 1,106 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITM2C-204ENST00000409704 TERF2IPQ9NYB0 399 aa25.21■■□□□ 1.63
ITM2C-204ENST00000409704 TNS1Q9HBL0 1735 aaKnown RBP25.2■■□□□ 1.63
ITM2C-204ENST00000409704 NME9Q86XW9 330 aa25.19■■□□□ 1.62
ITM2C-204ENST00000409704 LRRC37A3O60309 1634 aa25.19■■□□□ 1.62
ITM2C-204ENST00000409704 SOX12O15370 315 aa25.18■■□□□ 1.62
ITM2C-204ENST00000409704 TMF1P82094 1093 aa25.18■■□□□ 1.62
ITM2C-204ENST00000409704 BARGINQ6ZT62 677 aa25.18■■□□□ 1.62
ITM2C-204ENST00000409704 ARHGEF25Q86VW2 580 aa25.18■■□□□ 1.62
ITM2C-204ENST00000409704 CCER1Q8TC90 406 aaPredicted RBP25.18■■□□□ 1.62
ITM2C-204ENST00000409704 USP35Q9P2H5 1018 aa25.18■■□□□ 1.62
ITM2C-204ENST00000409704 ZRANB1Q9UGI0 708 aa25.18■■□□□ 1.62
ITM2C-204ENST00000409704 ANKRD36BQ8N2N9 1353 aa25.17■■□□□ 1.62
ITM2C-204ENST00000409704 TCP11L2Q8N4U5 519 aa25.15■■□□□ 1.62
ITM2C-204ENST00000409704 THRAP3Q9Y2W1 955 aaKnown RBP25.14■■□□□ 1.62
ITM2C-204ENST00000409704 KIF20BQ96Q89 1820 aa25.14■■□□□ 1.61
ITM2C-204ENST00000409704 AXIN2Q9Y2T1 843 aa25.13■■□□□ 1.61
ITM2C-204ENST00000409704 WDR17Q8IZU2 1322 aa25.12■■□□□ 1.61
ITM2C-204ENST00000409704 FAM182BQ5T319 152 aa25.11■■□□□ 1.61
ITM2C-204ENST00000409704 SF3B2Q13435 895 aaKnown RBP25.1■■□□□ 1.61
ITM2C-204ENST00000409704 PEAK1Q9H792 1746 aa25.09■■□□□ 1.61
ITM2C-204ENST00000409704 CDCA8Q53HL2 280 aa25.08■■□□□ 1.61
ITM2C-204ENST00000409704 TOM1L2Q6ZVM7 507 aa25.08■■□□□ 1.61
ITM2C-204ENST00000409704 DEFB132Q7Z7B7 95 aa25.08■■□□□ 1.61
ITM2C-204ENST00000409704 FAM208AQ9UK61 1670 aaKnown RBP25.07■■□□□ 1.6
ITM2C-204ENST00000409704 DISP2A7MBM2 1401 aa25.06■■□□□ 1.6
ITM2C-204ENST00000409704 PDE3BQ13370 1112 aa25.03■■□□□ 1.6
ITM2C-204ENST00000409704 ERBB3P21860 1342 aa25.03■■□□□ 1.6
ITM2C-204ENST00000409704 CSB-PGBD3P0DP91 1061 aa25.02■■□□□ 1.6
ITM2C-204ENST00000409704 BAG6P46379 1132 aa25.02■■□□□ 1.6
ITM2C-204ENST00000409704 FAM196AQ6ZSG2 479 aa25.02■■□□□ 1.6
ITM2C-204ENST00000409704 CCDC7Q96M83 1385 aa25.02■■□□□ 1.6
ITM2C-204ENST00000409704 OVOS2A0A0G2JMS6 1433 aa25.02■■□□□ 1.6
ITM2C-204ENST00000409704 SBF2Q86WG5 1849 aa25.01■■□□□ 1.59
ITM2C-204ENST00000409704 COG3Q96JB2 828 aa25.01■■□□□ 1.59
ITM2C-204ENST00000409704 CARD10Q9BWT7 1032 aa25.01■■□□□ 1.59
ITM2C-204ENST00000409704 RREB1Q92766 1687 aa25■■□□□ 1.59
ITM2C-204ENST00000409704 TNS2Q63HR2 1409 aa24.98■■□□□ 1.59
ITM2C-204ENST00000409704 NSD3Q9BZ95 1437 aa24.98■■□□□ 1.59
ITM2C-204ENST00000409704 EIF4G2P78344 907 aaKnown RBP eCLIP24.96■■□□□ 1.59
ITM2C-204ENST00000409704 DDB1Q16531 1140 aa24.96■■□□□ 1.59
ITM2C-204ENST00000409704 CDCA7Q9BWT1 371 aaPredicted RBP24.96■■□□□ 1.59
ITM2C-204ENST00000409704 RGPD3A6NKT7 1758 aaPredicted RBP24.95■■□□□ 1.59
ITM2C-204ENST00000409704 RGPD4Q7Z3J3 1758 aa24.95■■□□□ 1.59
ITM2C-204ENST00000409704 RTL1A6NKG5 1358 aa24.95■■□□□ 1.59
ITM2C-204ENST00000409704 TRIM37O94972 964 aa24.95■■□□□ 1.58
ITM2C-204ENST00000409704 ANKRD24Q8TF21 1146 aa24.95■■□□□ 1.58
ITM2C-204ENST00000409704 NUP188Q5SRE5 1749 aa24.95■■□□□ 1.58
ITM2C-204ENST00000409704 MAP3K19Q56UN5 1328 aa24.94■■□□□ 1.58
ITM2C-204ENST00000409704 FYB1O15117 783 aa24.94■■□□□ 1.58
ITM2C-204ENST00000409704 HSPA5P11021 654 aaKnown RBP24.94■■□□□ 1.58
ITM2C-204ENST00000409704 GGNBP2Q9H3C7 697 aa24.94■■□□□ 1.58
ITM2C-204ENST00000409704 ANKRD26Q9UPS8 1709 aa24.94■■□□□ 1.58
ITM2C-204ENST00000409704 RGPD2P0DJD1 1756 aa24.93■■□□□ 1.58
ITM2C-204ENST00000409704 EN1Q05925 392 aaPredicted RBP24.93■■□□□ 1.58
ITM2C-204ENST00000409704 IP6K1Q92551 441 aa24.93■■□□□ 1.58
ITM2C-204ENST00000409704 C11orf95C9JLR9 678 aaPredicted RBP24.91■■□□□ 1.58
ITM2C-204ENST00000409704 CARD14Q9BXL6 1004 aa24.91■■□□□ 1.58
ITM2C-204ENST00000409704 BCL9O00512 1426 aa24.91■■□□□ 1.58
ITM2C-204ENST00000409704 NLRP2Q9NX02 1062 aa24.9■■□□□ 1.58
ITM2C-204ENST00000409704 PARD3Q8TEW0 1356 aa24.9■■□□□ 1.58
ITM2C-204ENST00000409704 HOXC9P31274 260 aa24.89■■□□□ 1.58
ITM2C-204ENST00000409704 NHSQ6T4R5 1651 aa24.88■■□□□ 1.57
ITM2C-204ENST00000409704 FBLN1P23142 703 aa24.88■■□□□ 1.57
ITM2C-204ENST00000409704 APBA3O96018 575 aa24.87■■□□□ 1.57
ITM2C-204ENST00000409704 EZH2Q15910 746 aaKnown RBP24.87■■□□□ 1.57
ITM2C-204ENST00000409704 MARCH10Q8NA82 808 aaPredicted RBP24.87■■□□□ 1.57
ITM2C-204ENST00000409704 AMPHP49418 695 aa24.86■■□□□ 1.57
ITM2C-204ENST00000409704 CAMKK2Q96RR4 588 aa24.86■■□□□ 1.57
ITM2C-204ENST00000409704 POLR3GLQ9BT43 218 aa24.86■■□□□ 1.57
ITM2C-204ENST00000409704 RRS1Q15050 365 aaKnown RBP24.85■■□□□ 1.57
ITM2C-204ENST00000409704 SHANK3Q9BYB0 1731 aa24.85■■□□□ 1.57
ITM2C-204ENST00000409704 LRP5O75197 1615 aa24.84■■□□□ 1.57
ITM2C-204ENST00000409704 IL2RBP14784 551 aa24.84■■□□□ 1.57
ITM2C-204ENST00000409704 LTV1Q96GA3 475 aaPredicted RBP24.84■■□□□ 1.57
ITM2C-204ENST00000409704 EXOC5O00471 708 aa24.83■■□□□ 1.57
ITM2C-204ENST00000409704 FLT4P35916 1363 aa24.82■■□□□ 1.56
ITM2C-204ENST00000409704 KIF24Q5T7B8 1368 aa24.82■■□□□ 1.56
ITM2C-204ENST00000409704 SMG6Q86US8 1419 aaKnown RBP24.82■■□□□ 1.56
ITM2C-204ENST00000409704 SRCAPQ6ZRS2 3230 aa24.81■■□□□ 1.56
ITM2C-204ENST00000409704 CGNL1Q0VF96 1302 aa24.81■■□□□ 1.56
ITM2C-204ENST00000409704 MEGF6O75095 1541 aa24.8■■□□□ 1.56
ITM2C-204ENST00000409704 INSRP06213 1382 aa24.8■■□□□ 1.56
ITM2C-204ENST00000409704 MAP2P11137 1827 aaKnown RBP24.79■■□□□ 1.56
ITM2C-204ENST00000409704 PSDA5PKW4 1024 aaPredicted RBP24.77■■□□□ 1.56
ITM2C-204ENST00000409704 BCL11BQ9C0K0 894 aaPredicted RBP24.77■■□□□ 1.56
ITM2C-204ENST00000409704 DOT1LQ8TEK3 1739 aa24.77■■□□□ 1.56
ITM2C-204ENST00000409704 PTF1AQ7RTS3 328 aa24.76■■□□□ 1.55
ITM2C-204ENST00000409704 BTAF1O14981 1849 aa24.76■■□□□ 1.55
ITM2C-204ENST00000409704 EMILIN1Q9Y6C2 1016 aa24.74■■□□□ 1.55
ITM2C-204ENST00000409704 NSD2O96028 1365 aa24.72■■□□□ 1.55
ITM2C-204ENST00000409704 PLSCR1O15162 318 aa24.72■■□□□ 1.55
ITM2C-204ENST00000409704 R3HDM1Q15032 1099 aaKnown RBP24.72■■□□□ 1.55
ITM2C-204ENST00000409704 HSP90AB2PQ58FF8 381 aa24.72■■□□□ 1.55
ITM2C-204ENST00000409704 NCAPD2Q15021 1401 aa24.71■■□□□ 1.55
ITM2C-204ENST00000409704 NBPF6Q5VWK0 638 aa24.71■■□□□ 1.55
ITM2C-204ENST00000409704 NBPF4Q96M43 638 aa24.71■■□□□ 1.55
ITM2C-204ENST00000409704 PANK3Q9H999 370 aa24.71■■□□□ 1.55
ITM2C-204ENST00000409704 PKD1L3Q7Z443 1732 aa24.71■■□□□ 1.55
ITM2C-204ENST00000409704 KIF7Q2M1P5 1343 aa24.69■■□□□ 1.54
ITM2C-204ENST00000409704 USHBP1Q8N6Y0 703 aa24.69■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms