RNA–Protein interactions for RNA: ENST00000409472.5

SCAMP4-202, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2 BASIC

Gene SCAMP4, Length 2,394 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-202ENST00000409472 NALCNQ8IZF0 1738 aa19.5■□□□□ 0.71
SCAMP4-202ENST00000409472 XRN1Q8IZH2 1706 aaKnown RBP19.5■□□□□ 0.71
SCAMP4-202ENST00000409472 TRIM27P14373 513 aa19.5■□□□□ 0.71
SCAMP4-202ENST00000409472 ZNF692Q9BU19 519 aaPredicted RBP19.5■□□□□ 0.71
SCAMP4-202ENST00000409472 AEBP1Q8IUX7 1158 aa19.49■□□□□ 0.71
SCAMP4-202ENST00000409472 PTCH1Q13635 1447 aa19.49■□□□□ 0.71
SCAMP4-202ENST00000409472 PLEKHG3A1L390 1219 aa19.49■□□□□ 0.71
SCAMP4-202ENST00000409472 ZKSCAN2Q63HK3 967 aa19.49■□□□□ 0.71
SCAMP4-202ENST00000409472 PNNQ9H307 717 aaKnown RBP19.48■□□□□ 0.71
SCAMP4-202ENST00000409472 FAM83GA6ND36 823 aa19.48■□□□□ 0.71
SCAMP4-202ENST00000409472 MVPQ14764 893 aaKnown RBP19.48■□□□□ 0.71
SCAMP4-202ENST00000409472 TBX22Q9Y458 520 aa19.48■□□□□ 0.71
SCAMP4-202ENST00000409472 RIMS1Q86UR5 1692 aaKnown RBP19.48■□□□□ 0.71
SCAMP4-202ENST00000409472 RTL5Q5HYW3 569 aaPredicted RBP19.47■□□□□ 0.71
SCAMP4-202ENST00000409472 CEP170BQ9Y4F5 1589 aaPredicted RBP19.47■□□□□ 0.71
SCAMP4-202ENST00000409472 SSH2Q76I76 1423 aa19.47■□□□□ 0.71
SCAMP4-202ENST00000409472 NOB1Q9ULX3 412 aaKnown RBP19.47■□□□□ 0.71
SCAMP4-202ENST00000409472 CT47B1P0C2W7 299 aaPredicted RBP19.46■□□□□ 0.71
SCAMP4-202ENST00000409472 EIF4A2Q14240 407 aaKnown RBP19.46■□□□□ 0.71
SCAMP4-202ENST00000409472 NBR1Q14596 966 aa19.46■□□□□ 0.71
SCAMP4-202ENST00000409472 FTSJ3Q8IY81 847 aaKnown RBP19.46■□□□□ 0.71
SCAMP4-202ENST00000409472 DZIP1LQ8IYY4 767 aaKnown RBP19.46■□□□□ 0.71
SCAMP4-202ENST00000409472 THEMISQ8N1K5 641 aaPredicted RBP19.46■□□□□ 0.71
SCAMP4-202ENST00000409472 DCTN1Q14203 1278 aa19.45■□□□□ 0.7
SCAMP4-202ENST00000409472 KCNA6P17658 529 aa19.44■□□□□ 0.7
SCAMP4-202ENST00000409472 TSPYL6Q8N831 410 aa19.44■□□□□ 0.7
SCAMP4-202ENST00000409472 NEFMP07197 916 aa19.44■□□□□ 0.7
SCAMP4-202ENST00000409472 HSP90AB2PQ58FF8 381 aa19.44■□□□□ 0.7
SCAMP4-202ENST00000409472 FAM161AQ3B820 660 aa19.43■□□□□ 0.7
SCAMP4-202ENST00000409472 PIK3C2AO00443 1686 aa19.43■□□□□ 0.7
SCAMP4-202ENST00000409472 ATF7IPQ6VMQ6 1270 aa19.42■□□□□ 0.7
SCAMP4-202ENST00000409472 RGPD1P0DJD0 1748 aa19.42■□□□□ 0.7
SCAMP4-202ENST00000409472 MBIPQ9NS73 344 aa19.42■□□□□ 0.7
SCAMP4-202ENST00000409472 ZBTB47Q9UFB7 747 aaPredicted RBP19.42■□□□□ 0.7
SCAMP4-202ENST00000409472 VIRMAQ69YN4 1812 aaKnown RBP19.42■□□□□ 0.7
SCAMP4-202ENST00000409472 ELL2O00472 640 aaPredicted RBP19.41■□□□□ 0.7
SCAMP4-202ENST00000409472 SULT6B1Q6IMI4 303 aa19.41■□□□□ 0.7
SCAMP4-202ENST00000409472 ITPRIPQ8IWB1 547 aa19.41■□□□□ 0.7
SCAMP4-202ENST00000409472 TMEM57Q8N5G2 664 aa19.41■□□□□ 0.7
SCAMP4-202ENST00000409472 RBM33Q96EV2 1170 aaKnown RBP19.41■□□□□ 0.7
SCAMP4-202ENST00000409472 USP31Q70CQ4 1352 aa19.4■□□□□ 0.7
SCAMP4-202ENST00000409472 FMN2Q9NZ56 1722 aa19.4■□□□□ 0.7
SCAMP4-202ENST00000409472 ZNF853P0CG23 659 aa19.39■□□□□ 0.69
SCAMP4-202ENST00000409472 MAP3K19Q56UN5 1328 aa19.38■□□□□ 0.69
SCAMP4-202ENST00000409472 NGDNQ8NEJ9 315 aaKnown RBP19.38■□□□□ 0.69
SCAMP4-202ENST00000409472 MARF1Q9Y4F3 1742 aaKnown RBP19.38■□□□□ 0.69
SCAMP4-202ENST00000409472 VAMP4O75379 141 aa19.37■□□□□ 0.69
SCAMP4-202ENST00000409472 PDZRN3Q9UPQ7 1066 aa19.37■□□□□ 0.69
SCAMP4-202ENST00000409472 IFT57Q9NWB7 429 aa19.37■□□□□ 0.69
SCAMP4-202ENST00000409472 C8orf58Q8NAV2 365 aa19.36■□□□□ 0.69
SCAMP4-202ENST00000409472 KIF16BQ96L93 1317 aa19.36■□□□□ 0.69
SCAMP4-202ENST00000409472 NUTM2GQ5VZR2 741 aa19.36■□□□□ 0.69
SCAMP4-202ENST00000409472 GNAI1P63096 354 aa19.35■□□□□ 0.69
SCAMP4-202ENST00000409472 AAMPQ13685 434 aa19.35■□□□□ 0.69
SCAMP4-202ENST00000409472 ALDH1L2Q3SY69 923 aa19.35■□□□□ 0.69
SCAMP4-202ENST00000409472 SEC24BO95487 1268 aa19.34■□□□□ 0.69
SCAMP4-202ENST00000409472 KRT24Q2M2I5 525 aa19.34■□□□□ 0.69
SCAMP4-202ENST00000409472 MCM10Q7L590 875 aa19.34■□□□□ 0.69
SCAMP4-202ENST00000409472 TTC21AQ8NDW8 1320 aa19.34■□□□□ 0.69
SCAMP4-202ENST00000409472 MRPL50Q8N5N7 158 aaKnown RBP19.33■□□□□ 0.69
SCAMP4-202ENST00000409472 IL27Q8NEV9 243 aa19.33■□□□□ 0.69
SCAMP4-202ENST00000409472 CFAP44Q96MT7 982 aa19.33■□□□□ 0.69
SCAMP4-202ENST00000409472 DDX19BQ9UMR2 479 aa19.33■□□□□ 0.69
SCAMP4-202ENST00000409472 RWDD1Q9H446 243 aaPredicted RBP19.33■□□□□ 0.68
SCAMP4-202ENST00000409472 SLC4A3P48751 1232 aa19.32■□□□□ 0.68
SCAMP4-202ENST00000409472 ZNF142P52746 1687 aaPredicted RBP19.32■□□□□ 0.68
SCAMP4-202ENST00000409472 FOXO3O43524 673 aa19.32■□□□□ 0.68
SCAMP4-202ENST00000409472 TWISTNBQ3B726 338 aaPredicted RBP19.32■□□□□ 0.68
SCAMP4-202ENST00000409472 ZBTB40Q9NUA8 1239 aa19.32■□□□□ 0.68
SCAMP4-202ENST00000409472 CHD2O14647 1828 aaKnown RBP19.32■□□□□ 0.68
SCAMP4-202ENST00000409472 CALD1Q05682 793 aaKnown RBP19.31■□□□□ 0.68
SCAMP4-202ENST00000409472 LMOD3Q0VAK6 560 aa19.3■□□□□ 0.68
SCAMP4-202ENST00000409472 USP19O94966 1318 aa19.3■□□□□ 0.68
SCAMP4-202ENST00000409472 ANKARQ7Z5J8 1434 aa19.3■□□□□ 0.68
SCAMP4-202ENST00000409472 SBNO1A3KN83 1393 aa19.29■□□□□ 0.68
SCAMP4-202ENST00000409472 FLT4P35916 1363 aa19.29■□□□□ 0.68
SCAMP4-202ENST00000409472 ADAMTSL3P82987 1691 aa19.29■□□□□ 0.68
SCAMP4-202ENST00000409472 PIK3R4Q99570 1358 aa19.29■□□□□ 0.68
SCAMP4-202ENST00000409472 IPO8O15397 1037 aaKnown RBP19.29■□□□□ 0.68
SCAMP4-202ENST00000409472 NLRP6P59044 892 aa19.29■□□□□ 0.68
SCAMP4-202ENST00000409472 C1orf115Q9H7X2 142 aa19.28■□□□□ 0.68
SCAMP4-202ENST00000409472 BRPF1P55201 1214 aaPredicted RBP19.28■□□□□ 0.68
SCAMP4-202ENST00000409472 ARHGEF10O15013 1369 aa19.27■□□□□ 0.68
SCAMP4-202ENST00000409472 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.27■□□□□ 0.68
SCAMP4-202ENST00000409472 HDAC1Q13547 482 aaPredicted RBP19.27■□□□□ 0.67
SCAMP4-202ENST00000409472 EYA1Q99502 592 aa19.26■□□□□ 0.67
SCAMP4-202ENST00000409472 AMPHP49418 695 aa19.26■□□□□ 0.67
SCAMP4-202ENST00000409472 MTHFSDQ2M296 383 aaKnown RBP19.26■□□□□ 0.67
SCAMP4-202ENST00000409472 ZNF428Q96B54 188 aa19.26■□□□□ 0.67
SCAMP4-202ENST00000409472 ANKLE2Q86XL3 938 aa19.25■□□□□ 0.67
SCAMP4-202ENST00000409472 MIS18AQ9NYP9 233 aa19.25■□□□□ 0.67
SCAMP4-202ENST00000409472 ABCC4O15439 1325 aa19.24■□□□□ 0.67
SCAMP4-202ENST00000409472 CRB1P82279 1406 aa19.24■□□□□ 0.67
SCAMP4-202ENST00000409472 RTN4Q9NQC3 1192 aaKnown RBP19.24■□□□□ 0.67
SCAMP4-202ENST00000409472 KDRP35968 1356 aa19.24■□□□□ 0.67
SCAMP4-202ENST00000409472 NWD1Q149M9 1564 aa19.24■□□□□ 0.67
SCAMP4-202ENST00000409472 IGSF1Q8N6C5 1336 aa19.23■□□□□ 0.67
SCAMP4-202ENST00000409472 USP54Q70EL1 1684 aa19.23■□□□□ 0.67
SCAMP4-202ENST00000409472 ZBTB7BO15156 539 aaPredicted RBP19.23■□□□□ 0.67
SCAMP4-202ENST00000409472 ABTB2Q8N961 1025 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms