RNA–Protein interactions for RNA: ENST00000409364.3

GTF3C3-202, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GTF3C3, Length 1,736 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-202ENST00000409364 POTEBQ6S5H4 581 aa8.23□□□□□ -1.09
GTF3C3-202ENST00000409364 TRMT2AQ8IZ69 625 aaKnown RBP8.23□□□□□ -1.09
GTF3C3-202ENST00000409364 C3P01024 1663 aa8.23□□□□□ -1.09
GTF3C3-202ENST00000409364 EDC4Q6P2E9 1401 aaKnown RBP8.22□□□□□ -1.09
GTF3C3-202ENST00000409364 RRP1P56182 461 aaKnown RBP8.22□□□□□ -1.09
GTF3C3-202ENST00000409364 SETD1AO15047 1707 aaKnown RBP8.22□□□□□ -1.09
GTF3C3-202ENST00000409364 CPS1P31327 1500 aa8.21□□□□□ -1.09
GTF3C3-202ENST00000409364 DIAPH1O60610 1272 aaKnown RBP8.21□□□□□ -1.09
GTF3C3-202ENST00000409364 CCDC27Q2M243 656 aa8.21□□□□□ -1.09
GTF3C3-202ENST00000409364 WDR63Q8IWG1 891 aa8.21□□□□□ -1.09
GTF3C3-202ENST00000409364 WWC1Q8IX03 1113 aa8.21□□□□□ -1.09
GTF3C3-202ENST00000409364 TCP11L2Q8N4U5 519 aa8.21□□□□□ -1.09
GTF3C3-202ENST00000409364 COG3Q96JB2 828 aa8.21□□□□□ -1.09
GTF3C3-202ENST00000409364 PTPRUQ92729 1446 aa8.21□□□□□ -1.1
GTF3C3-202ENST00000409364 MYT1Q01538 1121 aa8.2□□□□□ -1.1
GTF3C3-202ENST00000409364 POLKQ9UBT6 870 aa8.2□□□□□ -1.1
GTF3C3-202ENST00000409364 PNPLA6Q8IY17 1366 aa8.2□□□□□ -1.1
GTF3C3-202ENST00000409364 PRR36Q9H6K5 1346 aa8.2□□□□□ -1.1
GTF3C3-202ENST00000409364 U2SURPO15042 1029 aaKnown RBP8.2□□□□□ -1.1
GTF3C3-202ENST00000409364 FCHSD2O94868 740 aa8.2□□□□□ -1.1
GTF3C3-202ENST00000409364 PTGER2P43116 358 aa8.2□□□□□ -1.1
GTF3C3-202ENST00000409364 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.2□□□□□ -1.1
GTF3C3-202ENST00000409364 PTCH1Q13635 1447 aa8.19□□□□□ -1.1
GTF3C3-202ENST00000409364 ACEP12821 1306 aa8.19□□□□□ -1.1
GTF3C3-202ENST00000409364 NCKAP5LQ9HCH0 1330 aa8.19□□□□□ -1.1
GTF3C3-202ENST00000409364 AATKQ6ZMQ8 1374 aa8.19□□□□□ -1.1
GTF3C3-202ENST00000409364 NME9Q86XW9 330 aa8.19□□□□□ -1.1
GTF3C3-202ENST00000409364 TTC21BQ7Z4L5 1316 aa8.19□□□□□ -1.1
GTF3C3-202ENST00000409364 KNDC1Q76NI1 1749 aa8.18□□□□□ -1.1
GTF3C3-202ENST00000409364 NEFMP07197 916 aa8.18□□□□□ -1.1
GTF3C3-202ENST00000409364 KCNA6P17658 529 aa8.18□□□□□ -1.1
GTF3C3-202ENST00000409364 NEUROD2Q15784 382 aa8.18□□□□□ -1.1
GTF3C3-202ENST00000409364 DIP2AQ14689 1571 aa8.18□□□□□ -1.1
GTF3C3-202ENST00000409364 PPM1GO15355 546 aaPredicted RBP8.17□□□□□ -1.1
GTF3C3-202ENST00000409364 CCDC136Q96JN2 1154 aa8.17□□□□□ -1.1
GTF3C3-202ENST00000409364 PLEKHF1Q96S99 279 aa8.17□□□□□ -1.1
GTF3C3-202ENST00000409364 MAPK8IP3Q9UPT6 1336 aa8.17□□□□□ -1.1
GTF3C3-202ENST00000409364 NUTM2FA1L443 756 aa8.17□□□□□ -1.1
GTF3C3-202ENST00000409364 MAP3K13O43283 966 aa8.17□□□□□ -1.1
GTF3C3-202ENST00000409364 B4GALNT3Q6L9W6 998 aa8.17□□□□□ -1.1
GTF3C3-202ENST00000409364 NGDNQ8NEJ9 315 aaKnown RBP8.17□□□□□ -1.1
GTF3C3-202ENST00000409364 MYH16Q9H6N6 1097 aa8.17□□□□□ -1.1
GTF3C3-202ENST00000409364 CEP170BQ9Y4F5 1589 aaPredicted RBP8.17□□□□□ -1.1
GTF3C3-202ENST00000409364 TTC21AQ8NDW8 1320 aa8.17□□□□□ -1.1
GTF3C3-202ENST00000409364 CDC42BPGQ6DT37 1551 aa8.16□□□□□ -1.1
GTF3C3-202ENST00000409364 TMPOP42166 694 aaKnown RBP8.16□□□□□ -1.1
GTF3C3-202ENST00000409364 RRP7AQ9Y3A4 280 aaKnown RBP8.16□□□□□ -1.1
GTF3C3-202ENST00000409364 ADGRB2O60241 1585 aa8.16□□□□□ -1.1
GTF3C3-202ENST00000409364 SETD1BQ9UPS6 1966 aaKnown RBP8.15□□□□□ -1.1
GTF3C3-202ENST00000409364 NKTRP30414 1462 aaKnown RBP8.15□□□□□ -1.1
GTF3C3-202ENST00000409364 CT47B1P0C2W7 299 aaPredicted RBP8.15□□□□□ -1.11
GTF3C3-202ENST00000409364 FBLN1P23142 703 aa8.15□□□□□ -1.11
GTF3C3-202ENST00000409364 IL13P35225 146 aa8.15□□□□□ -1.11
GTF3C3-202ENST00000409364 EXOC6Q8TAG9 804 aa8.15□□□□□ -1.11
GTF3C3-202ENST00000409364 PMFBP1Q8TBY8 1022 aa8.15□□□□□ -1.11
GTF3C3-202ENST00000409364 TSHZ2Q9NRE2 1034 aa8.15□□□□□ -1.11
GTF3C3-202ENST00000409364 EMILIN1Q9Y6C2 1016 aa8.15□□□□□ -1.11
GTF3C3-202ENST00000409364 USP6P35125 1406 aa8.14□□□□□ -1.11
GTF3C3-202ENST00000409364 ANKARQ7Z5J8 1434 aa8.14□□□□□ -1.11
GTF3C3-202ENST00000409364 COL3A1P02461 1466 aaPredicted RBP8.14□□□□□ -1.11
GTF3C3-202ENST00000409364 PLIN1O60240 522 aa8.14□□□□□ -1.11
GTF3C3-202ENST00000409364 RIPK4P57078 832 aa8.14□□□□□ -1.11
GTF3C3-202ENST00000409364 IL16Q14005 1332 aa8.14□□□□□ -1.11
GTF3C3-202ENST00000409364 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.13□□□□□ -1.11
GTF3C3-202ENST00000409364 RRS1Q15050 365 aaKnown RBP8.13□□□□□ -1.11
GTF3C3-202ENST00000409364 RSPH6AQ9H0K4 717 aa8.13□□□□□ -1.11
GTF3C3-202ENST00000409364 SSH2Q76I76 1423 aa8.13□□□□□ -1.11
GTF3C3-202ENST00000409364 PRKAR2BP31323 418 aa8.12□□□□□ -1.11
GTF3C3-202ENST00000409364 CALD1Q05682 793 aaKnown RBP8.12□□□□□ -1.11
GTF3C3-202ENST00000409364 PDE3AQ14432 1141 aa8.12□□□□□ -1.11
GTF3C3-202ENST00000409364 SGIP1Q9BQI5 828 aa8.12□□□□□ -1.11
GTF3C3-202ENST00000409364 USP31Q70CQ4 1352 aa8.12□□□□□ -1.11
GTF3C3-202ENST00000409364 NPHP4O75161 1426 aaPredicted RBP8.12□□□□□ -1.11
GTF3C3-202ENST00000409364 SHPRHQ149N8 1683 aa8.12□□□□□ -1.11
GTF3C3-202ENST00000409364 PHF8Q9UPP1 1060 aa8.12□□□□□ -1.11
GTF3C3-202ENST00000409364 IQSEC2Q5JU85 1478 aa8.11□□□□□ -1.11
GTF3C3-202ENST00000409364 RARSP54136 660 aaKnown RBP8.11□□□□□ -1.11
GTF3C3-202ENST00000409364 LMOD3Q0VAK6 560 aa8.11□□□□□ -1.11
GTF3C3-202ENST00000409364 NFE2L2Q16236 605 aa8.11□□□□□ -1.11
GTF3C3-202ENST00000409364 CRBNQ96SW2 442 aa8.11□□□□□ -1.11
GTF3C3-202ENST00000409364 CDK12Q9NYV4 1490 aaPredicted RBP8.11□□□□□ -1.11
GTF3C3-202ENST00000409364 ANKRD26Q9UPS8 1709 aa8.1□□□□□ -1.11
GTF3C3-202ENST00000409364 BCAR3O75815 825 aa8.1□□□□□ -1.11
GTF3C3-202ENST00000409364 HMOX1P09601 288 aa8.1□□□□□ -1.11
GTF3C3-202ENST00000409364 NLRP6P59044 892 aa8.1□□□□□ -1.11
GTF3C3-202ENST00000409364 C14orf37Q86TY3 774 aa8.1□□□□□ -1.11
GTF3C3-202ENST00000409364 PROSER2Q86WR7 435 aaPredicted RBP8.1□□□□□ -1.11
GTF3C3-202ENST00000409364 OVOS2A0A0J9YW53 1432 aa8.09□□□□□ -1.11
GTF3C3-202ENST00000409364 OVOS2Q6IE36 1432 aa8.09□□□□□ -1.11
GTF3C3-202ENST00000409364 AAMPQ13685 434 aa8.09□□□□□ -1.11
GTF3C3-202ENST00000409364 EIF4A2Q14240 407 aaKnown RBP8.09□□□□□ -1.11
GTF3C3-202ENST00000409364 C20orf194Q5TEA3 1177 aa8.09□□□□□ -1.11
GTF3C3-202ENST00000409364 ABTB2Q8N961 1025 aa8.09□□□□□ -1.11
GTF3C3-202ENST00000409364 PHACTR3Q96KR7 559 aa8.09□□□□□ -1.11
GTF3C3-202ENST00000409364 XRN1Q8IZH2 1706 aaKnown RBP8.09□□□□□ -1.11
GTF3C3-202ENST00000409364 ZNF142P52746 1687 aaPredicted RBP8.09□□□□□ -1.11
GTF3C3-202ENST00000409364 MS4A1P11836 297 aa8.09□□□□□ -1.11
GTF3C3-202ENST00000409364 CANXP27824 592 aaKnown RBP8.09□□□□□ -1.11
GTF3C3-202ENST00000409364 AMPHP49418 695 aa8.09□□□□□ -1.11
GTF3C3-202ENST00000409364 IRX5P78411 483 aaPredicted RBP8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms