RNA–Protein interactions for RNA: ENST00000409248.8

C4orf48-201, Transcript of chromosome 4 open reading frame 48, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C4orf48, Length 433 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf48-201ENST00000409248 CARD14Q9BXL6 1004 aa28.62■■■□□ 2.17
C4orf48-201ENST00000409248 FYB1O15117 783 aa28.61■■■□□ 2.17
C4orf48-201ENST00000409248 SPATA31A1Q5TZJ5 1347 aa28.61■■■□□ 2.17
C4orf48-201ENST00000409248 CCDC7Q96M83 1385 aa28.61■■■□□ 2.17
C4orf48-201ENST00000409248 CGNL1Q0VF96 1302 aa28.6■■■□□ 2.17
C4orf48-201ENST00000409248 THSD7AQ9UPZ6 1657 aa28.6■■■□□ 2.17
C4orf48-201ENST00000409248 CRB1P82279 1406 aa28.6■■■□□ 2.17
C4orf48-201ENST00000409248 GGNBP2Q9H3C7 697 aa28.59■■■□□ 2.17
C4orf48-201ENST00000409248 BRWD3Q6RI45 1802 aa28.59■■■□□ 2.17
C4orf48-201ENST00000409248 ANKRD26Q9UPS8 1709 aa28.58■■■□□ 2.17
C4orf48-201ENST00000409248 A0A0G2JS52 829 aa28.58■■■□□ 2.17
C4orf48-201ENST00000409248 ONECUT3O60422 494 aaPredicted RBP28.58■■■□□ 2.17
C4orf48-201ENST00000409248 MYT1Q01538 1121 aa28.58■■■□□ 2.17
C4orf48-201ENST00000409248 FAM98CQ17RN3 349 aaKnown RBP28.58■■■□□ 2.17
C4orf48-201ENST00000409248 LARP1Q6PKG0 1096 aaKnown RBP28.58■■■□□ 2.17
C4orf48-201ENST00000409248 WASHC2AQ641Q2 1341 aa28.58■■■□□ 2.17
C4orf48-201ENST00000409248 SEPT12Q8IYM1 358 aa28.57■■■□□ 2.16
C4orf48-201ENST00000409248 WDR17Q8IZU2 1322 aa28.55■■■□□ 2.16
C4orf48-201ENST00000409248 PANK3Q9H999 370 aa28.55■■■□□ 2.16
C4orf48-201ENST00000409248 AXIN2Q9Y2T1 843 aa28.55■■■□□ 2.16
C4orf48-201ENST00000409248 BLMP54132 1417 aaPredicted RBP28.54■■■□□ 2.16
C4orf48-201ENST00000409248 USP35Q9P2H5 1018 aa28.54■■■□□ 2.16
C4orf48-201ENST00000409248 ZNF316A6NFI3 1004 aaPredicted RBP28.53■■■□□ 2.16
C4orf48-201ENST00000409248 TCP11L2Q8N4U5 519 aa28.53■■■□□ 2.16
C4orf48-201ENST00000409248 THRAP3Q9Y2W1 955 aaKnown RBP28.53■■■□□ 2.16
C4orf48-201ENST00000409248 RTL1A6NKG5 1358 aa28.52■■■□□ 2.16
C4orf48-201ENST00000409248 CSB-PGBD3P0DP91 1061 aa28.52■■■□□ 2.16
C4orf48-201ENST00000409248 TOM1L2Q6ZVM7 507 aa28.52■■■□□ 2.16
C4orf48-201ENST00000409248 WNK3Q9BYP7 1800 aa28.52■■■□□ 2.16
C4orf48-201ENST00000409248 FAM208AQ9UK61 1670 aaKnown RBP28.51■■■□□ 2.16
C4orf48-201ENST00000409248 BARGINQ6ZT62 677 aa28.51■■■□□ 2.15
C4orf48-201ENST00000409248 NSD2O96028 1365 aa28.5■■■□□ 2.15
C4orf48-201ENST00000409248 MAP3K19Q56UN5 1328 aa28.5■■■□□ 2.15
C4orf48-201ENST00000409248 ERBB3P21860 1342 aa28.49■■■□□ 2.15
C4orf48-201ENST00000409248 PARP4Q9UKK3 1724 aaKnown RBP28.48■■■□□ 2.15
C4orf48-201ENST00000409248 AMPHP49418 695 aa28.47■■■□□ 2.15
C4orf48-201ENST00000409248 KRT27Q7Z3Y8 459 aa28.47■■■□□ 2.15
C4orf48-201ENST00000409248 IP6K1Q92551 441 aa28.47■■■□□ 2.15
C4orf48-201ENST00000409248 UPF1Q92900 1129 aaKnown RBP eCLIP28.45■■■□□ 2.14
C4orf48-201ENST00000409248 KNSTRNQ9Y448 316 aa28.45■■■□□ 2.14
C4orf48-201ENST00000409248 KIF24Q5T7B8 1368 aa28.45■■■□□ 2.14
C4orf48-201ENST00000409248 ANKRD24Q8TF21 1146 aa28.44■■■□□ 2.14
C4orf48-201ENST00000409248 CARD10Q9BWT7 1032 aa28.44■■■□□ 2.14
C4orf48-201ENST00000409248 HOXC9P31274 260 aa28.43■■■□□ 2.14
C4orf48-201ENST00000409248 RRS1Q15050 365 aaKnown RBP28.43■■■□□ 2.14
C4orf48-201ENST00000409248 LRRC37A3O60309 1634 aa28.42■■■□□ 2.14
C4orf48-201ENST00000409248 PEAK1Q9H792 1746 aa28.41■■■□□ 2.14
C4orf48-201ENST00000409248 FLT4P35916 1363 aa28.41■■■□□ 2.14
C4orf48-201ENST00000409248 FBLN1P23142 703 aa28.41■■■□□ 2.14
C4orf48-201ENST00000409248 SMG6Q86US8 1419 aaKnown RBP28.41■■■□□ 2.14
C4orf48-201ENST00000409248 CDCA7Q9BWT1 371 aaPredicted RBP28.4■■■□□ 2.14
C4orf48-201ENST00000409248 NLRP2Q9NX02 1062 aa28.39■■■□□ 2.14
C4orf48-201ENST00000409248 MAP2P11137 1827 aaKnown RBP28.39■■■□□ 2.13
C4orf48-201ENST00000409248 DISP2A7MBM2 1401 aa28.36■■■□□ 2.13
C4orf48-201ENST00000409248 LTV1Q96GA3 475 aaPredicted RBP28.36■■■□□ 2.13
C4orf48-201ENST00000409248 INSRP06213 1382 aa28.36■■■□□ 2.13
C4orf48-201ENST00000409248 PDE3BQ13370 1112 aa28.35■■■□□ 2.13
C4orf48-201ENST00000409248 EP400Q96L91 3159 aa28.34■■■□□ 2.13
C4orf48-201ENST00000409248 CCDC125Q86Z20 511 aa28.33■■■□□ 2.13
C4orf48-201ENST00000409248 EMILIN1Q9Y6C2 1016 aa28.33■■■□□ 2.13
C4orf48-201ENST00000409248 AMER1Q5JTC6 1135 aaPredicted RBP28.32■■■□□ 2.12
C4orf48-201ENST00000409248 MORC1Q86VD1 984 aa28.32■■■□□ 2.12
C4orf48-201ENST00000409248 RGPD2P0DJD1 1756 aa28.32■■■□□ 2.12
C4orf48-201ENST00000409248 TNNT2P45379 298 aaPredicted RBP28.31■■■□□ 2.12
C4orf48-201ENST00000409248 DDX10Q13206 875 aaKnown RBP28.31■■■□□ 2.12
C4orf48-201ENST00000409248 DDB1Q16531 1140 aa28.31■■■□□ 2.12
C4orf48-201ENST00000409248 RGPD1P0DJD0 1748 aa28.31■■■□□ 2.12
C4orf48-201ENST00000409248 TNS2Q63HR2 1409 aa28.3■■■□□ 2.12
C4orf48-201ENST00000409248 PPM1GO15355 546 aaPredicted RBP28.3■■■□□ 2.12
C4orf48-201ENST00000409248 HSP90AB2PQ58FF8 381 aa28.29■■■□□ 2.12
C4orf48-201ENST00000409248 PER1O15534 1290 aaPredicted RBP28.28■■■□□ 2.12
C4orf48-201ENST00000409248 IL2RBP14784 551 aa28.28■■■□□ 2.12
C4orf48-201ENST00000409248 FAM196AQ6ZSG2 479 aa28.28■■■□□ 2.12
C4orf48-201ENST00000409248 OVOS2A0A0G2JMS6 1433 aa28.27■■■□□ 2.12
C4orf48-201ENST00000409248 NPC1L1Q9UHC9 1359 aa28.27■■■□□ 2.12
C4orf48-201ENST00000409248 POLKQ9UBT6 870 aa28.27■■■□□ 2.12
C4orf48-201ENST00000409248 SF3B2Q13435 895 aaKnown RBP28.26■■■□□ 2.11
C4orf48-201ENST00000409248 FAM182BQ5T319 152 aa28.26■■■□□ 2.11
C4orf48-201ENST00000409248 TNS1Q9HBL0 1735 aaKnown RBP28.23■■■□□ 2.11
C4orf48-201ENST00000409248 EXOC5O00471 708 aa28.22■■■□□ 2.11
C4orf48-201ENST00000409248 CC2D1BQ5T0F9 858 aaKnown RBP28.2■■■□□ 2.1
C4orf48-201ENST00000409248 NBPF6Q5VWK0 638 aa28.2■■■□□ 2.1
C4orf48-201ENST00000409248 NBPF4Q96M43 638 aa28.2■■■□□ 2.1
C4orf48-201ENST00000409248 MEGF6O75095 1541 aa28.18■■■□□ 2.1
C4orf48-201ENST00000409248 BCL9O00512 1426 aa28.18■■■□□ 2.1
C4orf48-201ENST00000409248 NCAPD2Q15021 1401 aa28.17■■■□□ 2.1
C4orf48-201ENST00000409248 SBF2Q86WG5 1849 aa28.16■■■□□ 2.1
C4orf48-201ENST00000409248 USHBP1Q8N6Y0 703 aa28.15■■■□□ 2.1
C4orf48-201ENST00000409248 MARCH10Q8NA82 808 aaPredicted RBP28.15■■■□□ 2.1
C4orf48-201ENST00000409248 RAPGEF4Q8WZA2 1011 aa28.15■■■□□ 2.1
C4orf48-201ENST00000409248 BAG6P46379 1132 aa28.14■■■□□ 2.1
C4orf48-201ENST00000409248 TRIM37O94972 964 aa28.13■■■□□ 2.09
C4orf48-201ENST00000409248 EIF4A2Q14240 407 aaKnown RBP28.13■■■□□ 2.09
C4orf48-201ENST00000409248 SHANK3Q9BYB0 1731 aa28.12■■■□□ 2.09
C4orf48-201ENST00000409248 TATP17735 454 aaPredicted RBP28.11■■■□□ 2.09
C4orf48-201ENST00000409248 CNGB1Q14028 1251 aaPredicted RBP28.09■■■□□ 2.09
C4orf48-201ENST00000409248 EYA1Q99502 592 aa28.09■■■□□ 2.09
C4orf48-201ENST00000409248 NHSQ6T4R5 1651 aa28.09■■■□□ 2.09
C4orf48-201ENST00000409248 PKD1L3Q7Z443 1732 aa28.09■■■□□ 2.09
C4orf48-201ENST00000409248 DEFB132Q7Z7B7 95 aa28.08■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms