RNA–Protein interactions for RNA: ENST00000407404.5

NR1H3-204, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 5 BASIC

Gene NR1H3, Length 1,330 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-204ENST00000407404 COL5A2P05997 1499 aaPredicted RBP23.03■■□□□ 1.28
NR1H3-204ENST00000407404 LTN1O94822 1766 aa23.03■■□□□ 1.28
NR1H3-204ENST00000407404 CCDC7Q96M83 1385 aa23.02■■□□□ 1.28
NR1H3-204ENST00000407404 ZEB1P37275 1124 aaPredicted RBP23.02■■□□□ 1.28
NR1H3-204ENST00000407404 AXIN2Q9Y2T1 843 aa23.02■■□□□ 1.28
NR1H3-204ENST00000407404 ABCC6O95255 1503 aa23.02■■□□□ 1.28
NR1H3-204ENST00000407404 LARP1Q6PKG0 1096 aaKnown RBP23.01■■□□□ 1.27
NR1H3-204ENST00000407404 SPATA31A1Q5TZJ5 1347 aa23■■□□□ 1.27
NR1H3-204ENST00000407404 WASHC2AQ641Q2 1341 aa23■■□□□ 1.27
NR1H3-204ENST00000407404 RGPD5Q99666 1765 aa23■■□□□ 1.27
NR1H3-204ENST00000407404 ONECUT3O60422 494 aaPredicted RBP22.99■■□□□ 1.27
NR1H3-204ENST00000407404 FBLN1P23142 703 aa22.97■■□□□ 1.27
NR1H3-204ENST00000407404 FAM98CQ17RN3 349 aaKnown RBP22.97■■□□□ 1.27
NR1H3-204ENST00000407404 SEPT12Q8IYM1 358 aa22.97■■□□□ 1.27
NR1H3-204ENST00000407404 USP35Q9P2H5 1018 aa22.97■■□□□ 1.27
NR1H3-204ENST00000407404 CRB1P82279 1406 aa22.96■■□□□ 1.27
NR1H3-204ENST00000407404 KNSTRNQ9Y448 316 aa22.96■■□□□ 1.27
NR1H3-204ENST00000407404 MAP3K19Q56UN5 1328 aa22.95■■□□□ 1.27
NR1H3-204ENST00000407404 WDR17Q8IZU2 1322 aa22.95■■□□□ 1.27
NR1H3-204ENST00000407404 A0A0G2JS52 829 aa22.95■■□□□ 1.26
NR1H3-204ENST00000407404 CSB-PGBD3P0DP91 1061 aa22.95■■□□□ 1.26
NR1H3-204ENST00000407404 MYT1Q01538 1121 aa22.95■■□□□ 1.26
NR1H3-204ENST00000407404 TOM1L2Q6ZVM7 507 aa22.95■■□□□ 1.26
NR1H3-204ENST00000407404 IP6K1Q92551 441 aa22.95■■□□□ 1.26
NR1H3-204ENST00000407404 AMPHP49418 695 aa22.94■■□□□ 1.26
NR1H3-204ENST00000407404 ANKRD26Q9UPS8 1709 aa22.94■■□□□ 1.26
NR1H3-204ENST00000407404 RRS1Q15050 365 aaKnown RBP22.93■■□□□ 1.26
NR1H3-204ENST00000407404 TCP11L2Q8N4U5 519 aa22.93■■□□□ 1.26
NR1H3-204ENST00000407404 THRAP3Q9Y2W1 955 aaKnown RBP22.93■■□□□ 1.26
NR1H3-204ENST00000407404 BLMP54132 1417 aaPredicted RBP22.93■■□□□ 1.26
NR1H3-204ENST00000407404 NSD2O96028 1365 aa22.92■■□□□ 1.26
NR1H3-204ENST00000407404 BARGINQ6ZT62 677 aa22.92■■□□□ 1.26
NR1H3-204ENST00000407404 HOXC9P31274 260 aa22.91■■□□□ 1.26
NR1H3-204ENST00000407404 RTL1A6NKG5 1358 aa22.9■■□□□ 1.26
NR1H3-204ENST00000407404 THSD7AQ9UPZ6 1657 aa22.9■■□□□ 1.26
NR1H3-204ENST00000407404 BRWD3Q6RI45 1802 aa22.9■■□□□ 1.26
NR1H3-204ENST00000407404 ANKRD24Q8TF21 1146 aa22.9■■□□□ 1.26
NR1H3-204ENST00000407404 ERBB3P21860 1342 aa22.9■■□□□ 1.26
NR1H3-204ENST00000407404 PER1O15534 1290 aaPredicted RBP22.88■■□□□ 1.25
NR1H3-204ENST00000407404 CARD10Q9BWT7 1032 aa22.88■■□□□ 1.25
NR1H3-204ENST00000407404 KRT27Q7Z3Y8 459 aa22.87■■□□□ 1.25
NR1H3-204ENST00000407404 KIF24Q5T7B8 1368 aa22.87■■□□□ 1.25
NR1H3-204ENST00000407404 AMER1Q5JTC6 1135 aaPredicted RBP22.86■■□□□ 1.25
NR1H3-204ENST00000407404 MORC1Q86VD1 984 aa22.86■■□□□ 1.25
NR1H3-204ENST00000407404 LTV1Q96GA3 475 aaPredicted RBP22.86■■□□□ 1.25
NR1H3-204ENST00000407404 NLRP2Q9NX02 1062 aa22.86■■□□□ 1.25
NR1H3-204ENST00000407404 TNNT2P45379 298 aaPredicted RBP22.85■■□□□ 1.25
NR1H3-204ENST00000407404 EMILIN1Q9Y6C2 1016 aa22.85■■□□□ 1.25
NR1H3-204ENST00000407404 FLT4P35916 1363 aa22.85■■□□□ 1.25
NR1H3-204ENST00000407404 PEAK1Q9H792 1746 aa22.85■■□□□ 1.25
NR1H3-204ENST00000407404 MAP2P11137 1827 aaKnown RBP22.84■■□□□ 1.25
NR1H3-204ENST00000407404 FAM208AQ9UK61 1670 aaKnown RBP22.83■■□□□ 1.25
NR1H3-204ENST00000407404 PPM1GO15355 546 aaPredicted RBP22.82■■□□□ 1.24
NR1H3-204ENST00000407404 UPF1Q92900 1129 aaKnown RBP eCLIP22.82■■□□□ 1.24
NR1H3-204ENST00000407404 CDCA7Q9BWT1 371 aaPredicted RBP22.82■■□□□ 1.24
NR1H3-204ENST00000407404 INSRP06213 1382 aa22.82■■□□□ 1.24
NR1H3-204ENST00000407404 WNK3Q9BYP7 1800 aa22.82■■□□□ 1.24
NR1H3-204ENST00000407404 PARP4Q9UKK3 1724 aaKnown RBP22.82■■□□□ 1.24
NR1H3-204ENST00000407404 HSP90AB2PQ58FF8 381 aa22.82■■□□□ 1.24
NR1H3-204ENST00000407404 POLKQ9UBT6 870 aa22.82■■□□□ 1.24
NR1H3-204ENST00000407404 SMG6Q86US8 1419 aaKnown RBP22.81■■□□□ 1.24
NR1H3-204ENST00000407404 PDE3BQ13370 1112 aa22.8■■□□□ 1.24
NR1H3-204ENST00000407404 CC2D1BQ5T0F9 858 aaKnown RBP22.8■■□□□ 1.24
NR1H3-204ENST00000407404 NPC1L1Q9UHC9 1359 aa22.78■■□□□ 1.24
NR1H3-204ENST00000407404 DDB1Q16531 1140 aa22.78■■□□□ 1.24
NR1H3-204ENST00000407404 DISP2A7MBM2 1401 aa22.77■■□□□ 1.24
NR1H3-204ENST00000407404 LRRC37A3O60309 1634 aa22.76■■□□□ 1.23
NR1H3-204ENST00000407404 RGPD2P0DJD1 1756 aa22.76■■□□□ 1.23
NR1H3-204ENST00000407404 FAM182BQ5T319 152 aa22.76■■□□□ 1.23
NR1H3-204ENST00000407404 IL2RBP14784 551 aa22.75■■□□□ 1.23
NR1H3-204ENST00000407404 CNGB1Q14028 1251 aaPredicted RBP22.74■■□□□ 1.23
NR1H3-204ENST00000407404 NBPF6Q5VWK0 638 aa22.74■■□□□ 1.23
NR1H3-204ENST00000407404 NBPF4Q96M43 638 aa22.74■■□□□ 1.23
NR1H3-204ENST00000407404 EXOC5O00471 708 aa22.73■■□□□ 1.23
NR1H3-204ENST00000407404 CCDC125Q86Z20 511 aa22.73■■□□□ 1.23
NR1H3-204ENST00000407404 FAM196AQ6ZSG2 479 aa22.72■■□□□ 1.23
NR1H3-204ENST00000407404 USHBP1Q8N6Y0 703 aa22.7■■□□□ 1.22
NR1H3-204ENST00000407404 TNS2Q63HR2 1409 aa22.69■■□□□ 1.22
NR1H3-204ENST00000407404 EIF4A2Q14240 407 aaKnown RBP22.68■■□□□ 1.22
NR1H3-204ENST00000407404 SF3B2Q13435 895 aaKnown RBP22.67■■□□□ 1.22
NR1H3-204ENST00000407404 MARCH10Q8NA82 808 aaPredicted RBP22.67■■□□□ 1.22
NR1H3-204ENST00000407404 OVOS2A0A0G2JMS6 1433 aa22.67■■□□□ 1.22
NR1H3-204ENST00000407404 MTHFSP49914 203 aa22.66■■□□□ 1.22
NR1H3-204ENST00000407404 DDX10Q13206 875 aaKnown RBP22.66■■□□□ 1.22
NR1H3-204ENST00000407404 RAPGEF4Q8WZA2 1011 aa22.65■■□□□ 1.22
NR1H3-204ENST00000407404 EYA1Q99502 592 aa22.65■■□□□ 1.22
NR1H3-204ENST00000407404 MEGF6O75095 1541 aa22.64■■□□□ 1.21
NR1H3-204ENST00000407404 RGPD1P0DJD0 1748 aa22.64■■□□□ 1.21
NR1H3-204ENST00000407404 TATP17735 454 aaPredicted RBP22.63■■□□□ 1.21
NR1H3-204ENST00000407404 NCAPD2Q15021 1401 aa22.63■■□□□ 1.21
NR1H3-204ENST00000407404 TRIM37O94972 964 aa22.62■■□□□ 1.21
NR1H3-204ENST00000407404 ZCRB1Q8TBF4 217 aaKnown RBP22.61■■□□□ 1.21
NR1H3-204ENST00000407404 BCL9O00512 1426 aa22.6■■□□□ 1.21
NR1H3-204ENST00000407404 DDX54Q8TDD1 881 aaKnown RBP22.59■■□□□ 1.21
NR1H3-204ENST00000407404 IGSF1Q8N6C5 1336 aa22.59■■□□□ 1.21
NR1H3-204ENST00000407404 IL13P35225 146 aa22.58■■□□□ 1.21
NR1H3-204ENST00000407404 BAG6P46379 1132 aa22.58■■□□□ 1.21
NR1H3-204ENST00000407404 TNS1Q9HBL0 1735 aaKnown RBP22.58■■□□□ 1.21
NR1H3-204ENST00000407404 SBF2Q86WG5 1849 aa22.57■■□□□ 1.2
NR1H3-204ENST00000407404 PPP2R1AP30153 589 aa22.57■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms