RNA–Protein interactions for RNA: ENST00000405402.6

GSE1-203, Transcript of Gse1 coiled-coil protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GSE1, Length 4,366 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSE1-203ENST00000405402 LRRCC1Q9C099 1032 aa16.63■□□□□ 0.25
GSE1-203ENST00000405402 UHRF1BP1Q6BDS2 1440 aa16.63■□□□□ 0.25
GSE1-203ENST00000405402 TBC1D9Q6ZT07 1266 aa16.62■□□□□ 0.25
GSE1-203ENST00000405402 C8orf58Q8NAV2 365 aa16.62■□□□□ 0.25
GSE1-203ENST00000405402 RUFY2Q8WXA3 655 aa16.62■□□□□ 0.25
GSE1-203ENST00000405402 SRGAP3O43295 1099 aa16.62■□□□□ 0.25
GSE1-203ENST00000405402 HSP90AB2PQ58FF8 381 aa16.62■□□□□ 0.25
GSE1-203ENST00000405402 WASLO00401 505 aaPredicted RBP16.62■□□□□ 0.25
GSE1-203ENST00000405402 PHF14O94880 888 aa16.62■□□□□ 0.25
GSE1-203ENST00000405402 ABCA5Q8WWZ7 1642 aa16.62■□□□□ 0.25
GSE1-203ENST00000405402 VSIG10Q8N0Z9 540 aa16.61■□□□□ 0.25
GSE1-203ENST00000405402 SF3A1Q15459 793 aaKnown RBP16.61■□□□□ 0.25
GSE1-203ENST00000405402 TNPO1Q92973 898 aaKnown RBP16.61■□□□□ 0.25
GSE1-203ENST00000405402 KDM4AO75164 1064 aa16.61■□□□□ 0.25
GSE1-203ENST00000405402 COL17A1Q9UMD9 1497 aaPredicted RBP16.6■□□□□ 0.25
GSE1-203ENST00000405402 R3HCC1Q9Y3T6 440 aaKnown RBP16.6■□□□□ 0.25
GSE1-203ENST00000405402 RAPGEF4Q8WZA2 1011 aa16.6■□□□□ 0.25
GSE1-203ENST00000405402 ITSN2Q9NZM3 1697 aa16.6■□□□□ 0.25
GSE1-203ENST00000405402 GOLGA6L6A8MZA4 724 aa16.59■□□□□ 0.25
GSE1-203ENST00000405402 ALDH1L2Q3SY69 923 aa16.59■□□□□ 0.25
GSE1-203ENST00000405402 CWC27Q6UX04 472 aaKnown RBP16.59■□□□□ 0.25
GSE1-203ENST00000405402 IFT57Q9NWB7 429 aa16.59■□□□□ 0.25
GSE1-203ENST00000405402 ANXA1P04083 346 aa16.59■□□□□ 0.25
GSE1-203ENST00000405402 ZNF530Q6P9A1 599 aaPredicted RBP16.59■□□□□ 0.25
GSE1-203ENST00000405402 POLKQ9UBT6 870 aa16.59■□□□□ 0.25
GSE1-203ENST00000405402 MYL6BP14649 208 aa16.59■□□□□ 0.25
GSE1-203ENST00000405402 ATP6V1DQ9Y5K8 247 aa16.59■□□□□ 0.25
GSE1-203ENST00000405402 RPAP2Q8IXW5 612 aaPredicted RBP16.59■□□□□ 0.25
GSE1-203ENST00000405402 BICD2Q8TD16 824 aa16.59■□□□□ 0.25
GSE1-203ENST00000405402 CCT4P50991 539 aaKnown RBP16.58■□□□□ 0.25
GSE1-203ENST00000405402 FSD1Q9BTV5 496 aa16.58■□□□□ 0.25
GSE1-203ENST00000405402 PANK2Q9BZ23 570 aa16.58■□□□□ 0.25
GSE1-203ENST00000405402 SRCIN1Q9C0H9 1055 aa16.58■□□□□ 0.25
GSE1-203ENST00000405402 DDX58O95786 925 aaKnown RBP16.58■□□□□ 0.24
GSE1-203ENST00000405402 SYTL4Q96C24 671 aaPredicted RBP16.58■□□□□ 0.24
GSE1-203ENST00000405402 KDM2BQ8NHM5 1336 aa16.58■□□□□ 0.24
GSE1-203ENST00000405402 MEIS3Q99687 375 aa16.57■□□□□ 0.24
GSE1-203ENST00000405402 DUOX2Q9NRD8 1548 aa16.57■□□□□ 0.24
GSE1-203ENST00000405402 CFAP65Q6ZU64 1925 aaKnown RBP16.57■□□□□ 0.24
GSE1-203ENST00000405402 STK3Q13188 491 aa16.57■□□□□ 0.24
GSE1-203ENST00000405402 NRDCO43847 1150 aa16.57■□□□□ 0.24
GSE1-203ENST00000405402 CSPP1Q1MSJ5 1256 aa16.57■□□□□ 0.24
GSE1-203ENST00000405402 CREBRFQ8IUR6 639 aa16.56■□□□□ 0.24
GSE1-203ENST00000405402 ARHGEF12Q9NZN5 1544 aa16.56■□□□□ 0.24
GSE1-203ENST00000405402 CNTROBQ8N137 903 aa16.56■□□□□ 0.24
GSE1-203ENST00000405402 DNAJC2Q99543 621 aaKnown RBP16.56■□□□□ 0.24
GSE1-203ENST00000405402 ZC3H6P61129 1189 aaKnown RBP16.56■□□□□ 0.24
GSE1-203ENST00000405402 CEBPZQ03701 1054 aaKnown RBP16.56■□□□□ 0.24
GSE1-203ENST00000405402 GDPD2Q9HCC8 539 aa16.56■□□□□ 0.24
GSE1-203ENST00000405402 POLR3AO14802 1390 aaPredicted RBP16.56■□□□□ 0.24
GSE1-203ENST00000405402 HTATSF1O43719 755 aaKnown RBP16.55■□□□□ 0.24
GSE1-203ENST00000405402 ADGRL2O95490 1459 aa16.55■□□□□ 0.24
GSE1-203ENST00000405402 ZNF592Q92610 1267 aa16.55■□□□□ 0.24
GSE1-203ENST00000405402 APPP05067 770 aa16.54■□□□□ 0.24
GSE1-203ENST00000405402 FOXO3O43524 673 aa16.54■□□□□ 0.24
GSE1-203ENST00000405402 RBM10P98175 930 aaKnown RBP16.54■□□□□ 0.24
GSE1-203ENST00000405402 HSP90AB4PQ58FF6 505 aa16.54■□□□□ 0.24
GSE1-203ENST00000405402 LRRFIP2Q9Y608 721 aaKnown RBP16.54■□□□□ 0.24
GSE1-203ENST00000405402 NUP160Q12769 1436 aa16.54■□□□□ 0.24
GSE1-203ENST00000405402 BECN2A8MW95 431 aa16.54■□□□□ 0.24
GSE1-203ENST00000405402 NUCB1Q02818 461 aa16.54■□□□□ 0.24
GSE1-203ENST00000405402 ISY1Q9ULR0 285 aaKnown RBP16.54■□□□□ 0.24
GSE1-203ENST00000405402 DENND4BO75064 1496 aaPredicted RBP16.54■□□□□ 0.24
GSE1-203ENST00000405402 ANKRD36BQ8N2N9 1353 aa16.53■□□□□ 0.24
GSE1-203ENST00000405402 ESPNB1AK53 854 aa16.53■□□□□ 0.24
GSE1-203ENST00000405402 ABCC11Q96J66 1382 aa16.53■□□□□ 0.24
GSE1-203ENST00000405402 SYCE3A1L190 88 aa16.53■□□□□ 0.24
GSE1-203ENST00000405402 BMP2KLQ5H9B9 411 aa16.53■□□□□ 0.24
GSE1-203ENST00000405402 EVA1CP58658 441 aa16.53■□□□□ 0.24
GSE1-203ENST00000405402 ASXL2Q76L83 1435 aa16.53■□□□□ 0.24
GSE1-203ENST00000405402 VAMP4O75379 141 aa16.52■□□□□ 0.24
GSE1-203ENST00000405402 HDAC1Q13547 482 aaPredicted RBP16.52■□□□□ 0.24
GSE1-203ENST00000405402 AMOTL2Q9Y2J4 779 aa16.52■□□□□ 0.24
GSE1-203ENST00000405402 TAF7Q15545 349 aaPredicted RBP16.52■□□□□ 0.24
GSE1-203ENST00000405402 A0A1W2PP64 1363 aa16.52■□□□□ 0.24
GSE1-203ENST00000405402 PIK3C2GO75747 1445 aa16.52■□□□□ 0.23
GSE1-203ENST00000405402 GNAT3A8MTJ3 354 aa16.52■□□□□ 0.23
GSE1-203ENST00000405402 MPRIPQ6WCQ1 1025 aa16.52■□□□□ 0.23
GSE1-203ENST00000405402 FERMT3Q86UX7 667 aa16.52■□□□□ 0.23
GSE1-203ENST00000405402 MAGI2Q86UL8 1455 aa16.52■□□□□ 0.23
GSE1-203ENST00000405402 RNF20Q5VTR2 975 aa16.52■□□□□ 0.23
GSE1-203ENST00000405402 ZBTB40Q9NUA8 1239 aa16.52■□□□□ 0.23
GSE1-203ENST00000405402 ACEP12821 1306 aa16.51■□□□□ 0.23
GSE1-203ENST00000405402 GOLGA6L19H0YKK7 550 aa16.51■□□□□ 0.23
GSE1-203ENST00000405402 MX1P20591 662 aa16.51■□□□□ 0.23
GSE1-203ENST00000405402 SHANK2Q9UPX8 1470 aa16.51■□□□□ 0.23
GSE1-203ENST00000405402 PLEKHO1Q53GL0 409 aaPredicted RBP16.51■□□□□ 0.23
GSE1-203ENST00000405402 FAM177BA6PVY3 158 aa16.5■□□□□ 0.23
GSE1-203ENST00000405402 BTBD11A6QL63 1104 aa16.5■□□□□ 0.23
GSE1-203ENST00000405402 AACSQ86V21 672 aa16.5■□□□□ 0.23
GSE1-203ENST00000405402 CCDC85AQ96PX6 553 aaPredicted RBP16.5■□□□□ 0.23
GSE1-203ENST00000405402 TRIM35Q9UPQ4 493 aa16.5■□□□□ 0.23
GSE1-203ENST00000405402 TARBP1Q13395 1621 aaKnown RBP16.5■□□□□ 0.23
GSE1-203ENST00000405402 ABCC10Q5T3U5 1492 aa16.5■□□□□ 0.23
GSE1-203ENST00000405402 SPC24Q8NBT2 197 aa16.5■□□□□ 0.23
GSE1-203ENST00000405402 WASHC4Q2M389 1173 aa16.49■□□□□ 0.23
GSE1-203ENST00000405402 MBD5Q9P267 1494 aa16.49■□□□□ 0.23
GSE1-203ENST00000405402 SDSP20132 328 aa16.49■□□□□ 0.23
GSE1-203ENST00000405402 FLIIQ13045 1269 aa16.49■□□□□ 0.23
GSE1-203ENST00000405402 MRPL50Q8N5N7 158 aaKnown RBP16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms