RNA–Protein interactions for RNA: ENST00000404616.2

AC007249.1-201, humanhuman

TSL 5 BASIC

Gene AC007249.1, Length 494 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC007249.1-201ENST00000404616 TCP11L2Q8N4U5 519 aa16.16■□□□□ 0.18
AC007249.1-201ENST00000404616 UPF1Q92900 1129 aaKnown RBP eCLIP16.16■□□□□ 0.18
AC007249.1-201ENST00000404616 CARD14Q9BXL6 1004 aa16.16■□□□□ 0.18
AC007249.1-201ENST00000404616 BRWD3Q6RI45 1802 aa16.16■□□□□ 0.18
AC007249.1-201ENST00000404616 LTN1O94822 1766 aa16.15■□□□□ 0.18
AC007249.1-201ENST00000404616 CRB1P82279 1406 aa16.15■□□□□ 0.18
AC007249.1-201ENST00000404616 CCDC125Q86Z20 511 aa16.15■□□□□ 0.18
AC007249.1-201ENST00000404616 POLR3GLQ9BT43 218 aa16.15■□□□□ 0.18
AC007249.1-201ENST00000404616 AXIN2Q9Y2T1 843 aa16.15■□□□□ 0.18
AC007249.1-201ENST00000404616 RGPD5Q99666 1765 aa16.15■□□□□ 0.18
AC007249.1-201ENST00000404616 WDR17Q8IZU2 1322 aa16.15■□□□□ 0.18
AC007249.1-201ENST00000404616 KIF20BQ96Q89 1820 aa16.15■□□□□ 0.18
AC007249.1-201ENST00000404616 KRT27Q7Z3Y8 459 aa16.14■□□□□ 0.17
AC007249.1-201ENST00000404616 CGNL1Q0VF96 1302 aa16.14■□□□□ 0.17
AC007249.1-201ENST00000404616 A0A0G2JS52 829 aa16.13■□□□□ 0.17
AC007249.1-201ENST00000404616 MYT1Q01538 1121 aa16.13■□□□□ 0.17
AC007249.1-201ENST00000404616 TOM1L2Q6ZVM7 507 aa16.13■□□□□ 0.17
AC007249.1-201ENST00000404616 NSD3Q9BZ95 1437 aa16.12■□□□□ 0.17
AC007249.1-201ENST00000404616 THSD7AQ9UPZ6 1657 aa16.12■□□□□ 0.17
AC007249.1-201ENST00000404616 CDCA7Q9BWT1 371 aaPredicted RBP16.12■□□□□ 0.17
AC007249.1-201ENST00000404616 GGNBP2Q9H3C7 697 aa16.12■□□□□ 0.17
AC007249.1-201ENST00000404616 BLMP54132 1417 aaPredicted RBP16.11■□□□□ 0.17
AC007249.1-201ENST00000404616 C11orf95C9JLR9 678 aaPredicted RBP16.11■□□□□ 0.17
AC007249.1-201ENST00000404616 CSB-PGBD3P0DP91 1061 aa16.11■□□□□ 0.17
AC007249.1-201ENST00000404616 IP6K1Q92551 441 aa16.11■□□□□ 0.17
AC007249.1-201ENST00000404616 CARD10Q9BWT7 1032 aa16.11■□□□□ 0.17
AC007249.1-201ENST00000404616 USP35Q9P2H5 1018 aa16.11■□□□□ 0.17
AC007249.1-201ENST00000404616 PANK3Q9H999 370 aa16.1■□□□□ 0.17
AC007249.1-201ENST00000404616 KIF24Q5T7B8 1368 aa16.09■□□□□ 0.17
AC007249.1-201ENST00000404616 CCDC7Q96M83 1385 aa16.09■□□□□ 0.17
AC007249.1-201ENST00000404616 AMPHP49418 695 aa16.08■□□□□ 0.16
AC007249.1-201ENST00000404616 ERBB3P21860 1342 aa16.08■□□□□ 0.16
AC007249.1-201ENST00000404616 KIF7Q2M1P5 1343 aa16.08■□□□□ 0.16
AC007249.1-201ENST00000404616 MAP3K19Q56UN5 1328 aa16.08■□□□□ 0.16
AC007249.1-201ENST00000404616 RTL1A6NKG5 1358 aa16.08■□□□□ 0.16
AC007249.1-201ENST00000404616 ANKRD24Q8TF21 1146 aa16.07■□□□□ 0.16
AC007249.1-201ENST00000404616 NSD2O96028 1365 aa16.07■□□□□ 0.16
AC007249.1-201ENST00000404616 PARP4Q9UKK3 1724 aaKnown RBP16.06■□□□□ 0.16
AC007249.1-201ENST00000404616 FAM208AQ9UK61 1670 aaKnown RBP16.06■□□□□ 0.16
AC007249.1-201ENST00000404616 HOXC9P31274 260 aa16.06■□□□□ 0.16
AC007249.1-201ENST00000404616 PDE3BQ13370 1112 aa16.06■□□□□ 0.16
AC007249.1-201ENST00000404616 EP400Q96L91 3159 aa16.06■□□□□ 0.16
AC007249.1-201ENST00000404616 FAM196AQ6ZSG2 479 aa16.05■□□□□ 0.16
AC007249.1-201ENST00000404616 KNSTRNQ9Y448 316 aa16.05■□□□□ 0.16
AC007249.1-201ENST00000404616 ANKRD26Q9UPS8 1709 aa16.05■□□□□ 0.16
AC007249.1-201ENST00000404616 MAP2P11137 1827 aaKnown RBP16.04■□□□□ 0.16
AC007249.1-201ENST00000404616 NLRP2Q9NX02 1062 aa16.04■□□□□ 0.16
AC007249.1-201ENST00000404616 WNK3Q9BYP7 1800 aa16.03■□□□□ 0.16
AC007249.1-201ENST00000404616 SF3B2Q13435 895 aaKnown RBP16.03■□□□□ 0.16
AC007249.1-201ENST00000404616 RRS1Q15050 365 aaKnown RBP16.03■□□□□ 0.16
AC007249.1-201ENST00000404616 DDB1Q16531 1140 aa16.03■□□□□ 0.16
AC007249.1-201ENST00000404616 FLT4P35916 1363 aa16.02■□□□□ 0.16
AC007249.1-201ENST00000404616 FBLN1P23142 703 aa16.02■□□□□ 0.16
AC007249.1-201ENST00000404616 INSRP06213 1382 aa16.01■□□□□ 0.15
AC007249.1-201ENST00000404616 EXOC5O00471 708 aa16.01■□□□□ 0.15
AC007249.1-201ENST00000404616 DISP2A7MBM2 1401 aa16.01■□□□□ 0.15
AC007249.1-201ENST00000404616 SMG6Q86US8 1419 aaKnown RBP16.01■□□□□ 0.15
AC007249.1-201ENST00000404616 IL2RBP14784 551 aa16■□□□□ 0.15
AC007249.1-201ENST00000404616 WASHC2AQ641Q2 1341 aa15.99■□□□□ 0.15
AC007249.1-201ENST00000404616 LTV1Q96GA3 475 aaPredicted RBP15.99■□□□□ 0.15
AC007249.1-201ENST00000404616 LRRC37A3O60309 1634 aa15.98■□□□□ 0.15
AC007249.1-201ENST00000404616 PER1O15534 1290 aaPredicted RBP15.98■□□□□ 0.15
AC007249.1-201ENST00000404616 RGPD1P0DJD0 1748 aa15.98■□□□□ 0.15
AC007249.1-201ENST00000404616 HSP90AB2PQ58FF8 381 aa15.98■□□□□ 0.15
AC007249.1-201ENST00000404616 BCL9O00512 1426 aa15.97■□□□□ 0.15
AC007249.1-201ENST00000404616 AMER1Q5JTC6 1135 aaPredicted RBP15.97■□□□□ 0.15
AC007249.1-201ENST00000404616 FAM182BQ5T319 152 aa15.97■□□□□ 0.15
AC007249.1-201ENST00000404616 MORC1Q86VD1 984 aa15.97■□□□□ 0.15
AC007249.1-201ENST00000404616 POLKQ9UBT6 870 aa15.97■□□□□ 0.15
AC007249.1-201ENST00000404616 EMILIN1Q9Y6C2 1016 aa15.97■□□□□ 0.15
AC007249.1-201ENST00000404616 PEAK1Q9H792 1746 aa15.97■□□□□ 0.15
AC007249.1-201ENST00000404616 OVOS2A0A0G2JMS6 1433 aa15.96■□□□□ 0.15
AC007249.1-201ENST00000404616 ZEB1P37275 1124 aaPredicted RBP15.96■□□□□ 0.15
AC007249.1-201ENST00000404616 BAG6P46379 1132 aa15.96■□□□□ 0.15
AC007249.1-201ENST00000404616 NPC1L1Q9UHC9 1359 aa15.96■□□□□ 0.15
AC007249.1-201ENST00000404616 RGPD2P0DJD1 1756 aa15.95■□□□□ 0.14
AC007249.1-201ENST00000404616 TNS2Q63HR2 1409 aa15.95■□□□□ 0.14
AC007249.1-201ENST00000404616 PPM1GO15355 546 aaPredicted RBP15.95■□□□□ 0.14
AC007249.1-201ENST00000404616 SBF2Q86WG5 1849 aa15.94■□□□□ 0.14
AC007249.1-201ENST00000404616 KAT6BQ8WYB5 2073 aa15.93■□□□□ 0.14
AC007249.1-201ENST00000404616 TRIM37O94972 964 aa15.93■□□□□ 0.14
AC007249.1-201ENST00000404616 TNNT2P45379 298 aaPredicted RBP15.93■□□□□ 0.14
AC007249.1-201ENST00000404616 NBPF6Q5VWK0 638 aa15.93■□□□□ 0.14
AC007249.1-201ENST00000404616 MARCH10Q8NA82 808 aaPredicted RBP15.93■□□□□ 0.14
AC007249.1-201ENST00000404616 NBPF4Q96M43 638 aa15.93■□□□□ 0.14
AC007249.1-201ENST00000404616 RAPGEF4Q8WZA2 1011 aa15.92■□□□□ 0.14
AC007249.1-201ENST00000404616 TNS1Q9HBL0 1735 aaKnown RBP15.91■□□□□ 0.14
AC007249.1-201ENST00000404616 PARD3Q8TEW0 1356 aa15.9■□□□□ 0.14
AC007249.1-201ENST00000404616 DEFB132Q7Z7B7 95 aa15.9■□□□□ 0.14
AC007249.1-201ENST00000404616 BCL11BQ9C0K0 894 aaPredicted RBP15.9■□□□□ 0.14
AC007249.1-201ENST00000404616 APBA3O96018 575 aa15.89■□□□□ 0.13
AC007249.1-201ENST00000404616 TATP17735 454 aaPredicted RBP15.89■□□□□ 0.13
AC007249.1-201ENST00000404616 ZCRB1Q8TBF4 217 aaKnown RBP15.89■□□□□ 0.13
AC007249.1-201ENST00000404616 NCAPD2Q15021 1401 aa15.88■□□□□ 0.13
AC007249.1-201ENST00000404616 PLEKHG2Q9H7P9 1386 aa15.87■□□□□ 0.13
AC007249.1-201ENST00000404616 EIF4A2Q14240 407 aaKnown RBP15.87■□□□□ 0.13
AC007249.1-201ENST00000404616 CC2D1BQ5T0F9 858 aaKnown RBP15.87■□□□□ 0.13
AC007249.1-201ENST00000404616 EYA1Q99502 592 aa15.87■□□□□ 0.13
AC007249.1-201ENST00000404616 PLSCR1O15162 318 aa15.86■□□□□ 0.13
AC007249.1-201ENST00000404616 EN1Q05925 392 aaPredicted RBP15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms