RNA–Protein interactions for RNA: ENST00000403433.5

CHTOP-205, Transcript of chromatin target of PRMT1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHTOP, Length 1,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-205ENST00000403433 SSH1Q8WYL5 1049 aa22.91■■□□□ 1.26
CHTOP-205ENST00000403433 PHACTR3Q96KR7 559 aa22.91■■□□□ 1.26
CHTOP-205ENST00000403433 PAK3O75914 559 aaPredicted RBP22.9■■□□□ 1.26
CHTOP-205ENST00000403433 TRHP20396 242 aaPredicted RBP22.9■■□□□ 1.26
CHTOP-205ENST00000403433 DLG5Q8TDM6 1919 aa22.9■■□□□ 1.26
CHTOP-205ENST00000403433 RIMS1Q86UR5 1692 aaKnown RBP22.89■■□□□ 1.26
CHTOP-205ENST00000403433 VIRMAQ69YN4 1812 aaKnown RBP22.89■■□□□ 1.25
CHTOP-205ENST00000403433 KIF16BQ96L93 1317 aa22.88■■□□□ 1.25
CHTOP-205ENST00000403433 CEP170BQ9Y4F5 1589 aaPredicted RBP22.88■■□□□ 1.25
CHTOP-205ENST00000403433 LMOD3Q0VAK6 560 aa22.88■■□□□ 1.25
CHTOP-205ENST00000403433 LAS1LQ9Y4W2 734 aaKnown RBP22.87■■□□□ 1.25
CHTOP-205ENST00000403433 PCDHB15Q9Y5E8 787 aa22.87■■□□□ 1.25
CHTOP-205ENST00000403433 TRIM27P14373 513 aa22.86■■□□□ 1.25
CHTOP-205ENST00000403433 C8orf34Q49A92 452 aa22.86■■□□□ 1.25
CHTOP-205ENST00000403433 ATF7IPQ6VMQ6 1270 aa22.86■■□□□ 1.25
CHTOP-205ENST00000403433 ALDH1L2Q3SY69 923 aa22.86■■□□□ 1.25
CHTOP-205ENST00000403433 RGPD8O14715 1765 aaPredicted RBP22.85■■□□□ 1.25
CHTOP-205ENST00000403433 ZNF428Q96B54 188 aa22.85■■□□□ 1.25
CHTOP-205ENST00000403433 RWDD1Q9H446 243 aaPredicted RBP22.85■■□□□ 1.25
CHTOP-205ENST00000403433 SSH2Q76I76 1423 aa22.85■■□□□ 1.25
CHTOP-205ENST00000403433 IPO8O15397 1037 aaKnown RBP22.84■■□□□ 1.25
CHTOP-205ENST00000403433 IFT57Q9NWB7 429 aa22.84■■□□□ 1.25
CHTOP-205ENST00000403433 NOB1Q9ULX3 412 aaKnown RBP22.84■■□□□ 1.25
CHTOP-205ENST00000403433 TTC21AQ8NDW8 1320 aa22.84■■□□□ 1.25
CHTOP-205ENST00000403433 PEAK1Q9H792 1746 aa22.84■■□□□ 1.25
CHTOP-205ENST00000403433 GNAI1P63096 354 aa22.84■■□□□ 1.25
CHTOP-205ENST00000403433 USP31Q70CQ4 1352 aa22.83■■□□□ 1.25
CHTOP-205ENST00000403433 DDRGK1Q96HY6 314 aa22.83■■□□□ 1.25
CHTOP-205ENST00000403433 THUMPD2Q9BTF0 503 aaKnown RBP22.82■■□□□ 1.24
CHTOP-205ENST00000403433 DDX19BQ9UMR2 479 aa22.82■■□□□ 1.24
CHTOP-205ENST00000403433 FMN2Q9NZ56 1722 aa22.82■■□□□ 1.24
CHTOP-205ENST00000403433 EIF4A2Q14240 407 aaKnown RBP22.82■■□□□ 1.24
CHTOP-205ENST00000403433 ITPRIPQ8IWB1 547 aa22.82■■□□□ 1.24
CHTOP-205ENST00000403433 PIK3R4Q99570 1358 aa22.8■■□□□ 1.24
CHTOP-205ENST00000403433 RGPD1P0DJD0 1748 aa22.8■■□□□ 1.24
CHTOP-205ENST00000403433 ANKARQ7Z5J8 1434 aa22.8■■□□□ 1.24
CHTOP-205ENST00000403433 NGDNQ8NEJ9 315 aaKnown RBP22.79■■□□□ 1.24
CHTOP-205ENST00000403433 ZNF853P0CG23 659 aa22.78■■□□□ 1.24
CHTOP-205ENST00000403433 BRPF1P55201 1214 aaPredicted RBP22.78■■□□□ 1.24
CHTOP-205ENST00000403433 SULT6B1Q6IMI4 303 aa22.77■■□□□ 1.24
CHTOP-205ENST00000403433 MBIPQ9NS73 344 aa22.77■■□□□ 1.24
CHTOP-205ENST00000403433 PIK3C2AO00443 1686 aa22.77■■□□□ 1.24
CHTOP-205ENST00000403433 TMEM57Q8N5G2 664 aa22.76■■□□□ 1.23
CHTOP-205ENST00000403433 ZNF142P52746 1687 aaPredicted RBP22.76■■□□□ 1.23
CHTOP-205ENST00000403433 CFAP44Q96MT7 982 aa22.76■■□□□ 1.23
CHTOP-205ENST00000403433 KCNA6P17658 529 aa22.75■■□□□ 1.23
CHTOP-205ENST00000403433 AEBP1Q8IUX7 1158 aa22.75■■□□□ 1.23
CHTOP-205ENST00000403433 PDZRN3Q9UPQ7 1066 aa22.75■■□□□ 1.23
CHTOP-205ENST00000403433 SOX12O15370 315 aa22.74■■□□□ 1.23
CHTOP-205ENST00000403433 VAMP4O75379 141 aa22.74■■□□□ 1.23
CHTOP-205ENST00000403433 HSP90AB2PQ58FF8 381 aa22.74■■□□□ 1.23
CHTOP-205ENST00000403433 SBNO1A3KN83 1393 aa22.73■■□□□ 1.23
CHTOP-205ENST00000403433 FAM83GA6ND36 823 aa22.72■■□□□ 1.23
CHTOP-205ENST00000403433 HDAC1Q13547 482 aaPredicted RBP22.72■■□□□ 1.23
CHTOP-205ENST00000403433 ARHGEF10O15013 1369 aa22.72■■□□□ 1.23
CHTOP-205ENST00000403433 MAP3K19Q56UN5 1328 aa22.72■■□□□ 1.23
CHTOP-205ENST00000403433 FLT4P35916 1363 aa22.72■■□□□ 1.23
CHTOP-205ENST00000403433 TWISTNBQ3B726 338 aaPredicted RBP22.71■■□□□ 1.23
CHTOP-205ENST00000403433 MRPL50Q8N5N7 158 aaKnown RBP22.71■■□□□ 1.23
CHTOP-205ENST00000403433 TSPYL6Q8N831 410 aa22.71■■□□□ 1.23
CHTOP-205ENST00000403433 CHD2O14647 1828 aaKnown RBP22.71■■□□□ 1.23
CHTOP-205ENST00000403433 ARHGAP45Q92619 1136 aa22.7■■□□□ 1.23
CHTOP-205ENST00000403433 ZBTB40Q9NUA8 1239 aa22.7■■□□□ 1.22
CHTOP-205ENST00000403433 USP54Q70EL1 1684 aa22.69■■□□□ 1.22
CHTOP-205ENST00000403433 DCTN1Q14203 1278 aa22.69■■□□□ 1.22
CHTOP-205ENST00000403433 ANKLE2Q86XL3 938 aa22.69■■□□□ 1.22
CHTOP-205ENST00000403433 CHMP4BQ9H444 224 aaKnown RBP22.68■■□□□ 1.22
CHTOP-205ENST00000403433 ELL2O00472 640 aaPredicted RBP22.67■■□□□ 1.22
CHTOP-205ENST00000403433 NBR1Q14596 966 aa22.67■■□□□ 1.22
CHTOP-205ENST00000403433 MARF1Q9Y4F3 1742 aaKnown RBP22.67■■□□□ 1.22
CHTOP-205ENST00000403433 ADAMTSL3P82987 1691 aa22.67■■□□□ 1.22
CHTOP-205ENST00000403433 AMPHP49418 695 aa22.67■■□□□ 1.22
CHTOP-205ENST00000403433 C8orf58Q8NAV2 365 aa22.67■■□□□ 1.22
CHTOP-205ENST00000403433 DAXXQ9UER7 740 aaPredicted RBP22.65■■□□□ 1.22
CHTOP-205ENST00000403433 NLRP6P59044 892 aa22.64■■□□□ 1.21
CHTOP-205ENST00000403433 HAP1P54257 671 aaPredicted RBP22.63■■□□□ 1.21
CHTOP-205ENST00000403433 ABCC4O15439 1325 aa22.63■■□□□ 1.21
CHTOP-205ENST00000403433 KDRP35968 1356 aa22.62■■□□□ 1.21
CHTOP-205ENST00000403433 KIF24Q5T7B8 1368 aa22.62■■□□□ 1.21
CHTOP-205ENST00000403433 MCM10Q7L590 875 aa22.62■■□□□ 1.21
CHTOP-205ENST00000403433 SMC5Q8IY18 1101 aa22.62■■□□□ 1.21
CHTOP-205ENST00000403433 API5Q9BZZ5 524 aaKnown RBP22.62■■□□□ 1.21
CHTOP-205ENST00000403433 CHL1O00533 1208 aa22.61■■□□□ 1.21
CHTOP-205ENST00000403433 IGSF1Q8N6C5 1336 aa22.6■■□□□ 1.21
CHTOP-205ENST00000403433 KIAA0232Q92628 1395 aa22.6■■□□□ 1.21
CHTOP-205ENST00000403433 SETD1BQ9UPS6 1966 aaKnown RBP22.59■■□□□ 1.21
CHTOP-205ENST00000403433 ZBTB7BO15156 539 aaPredicted RBP22.59■■□□□ 1.21
CHTOP-205ENST00000403433 ABTB2Q8N961 1025 aa22.59■■□□□ 1.21
CHTOP-205ENST00000403433 CRB1P82279 1406 aa22.58■■□□□ 1.21
CHTOP-205ENST00000403433 RTL5Q5HYW3 569 aaPredicted RBP22.58■■□□□ 1.21
CHTOP-205ENST00000403433 RTF1Q92541 710 aaKnown RBP22.58■■□□□ 1.21
CHTOP-205ENST00000403433 EYA1Q99502 592 aa22.58■■□□□ 1.21
CHTOP-205ENST00000403433 UPF2Q9HAU5 1272 aaKnown RBP22.58■■□□□ 1.21
CHTOP-205ENST00000403433 USP19O94966 1318 aa22.57■■□□□ 1.2
CHTOP-205ENST00000403433 NUTM2GQ5VZR2 741 aa22.57■■□□□ 1.2
CHTOP-205ENST00000403433 PHF8Q9UPP1 1060 aa22.57■■□□□ 1.2
CHTOP-205ENST00000403433 ADGRL3Q9HAR2 1447 aa22.57■■□□□ 1.2
CHTOP-205ENST00000403433 SEC24BO95487 1268 aa22.57■■□□□ 1.2
CHTOP-205ENST00000403433 MTHFSDQ2M296 383 aaKnown RBP22.57■■□□□ 1.2
CHTOP-205ENST00000403433 GAS2L2Q8NHY3 880 aa22.57■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms