RNA–Protein interactions for RNA: ENST00000401408.5

CLHC1-201, Transcript of clathrin heavy chain linker domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLHC1, Length 2,248 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1-201ENST00000401408 EVI5LQ96CN4 794 aa5.17□□□□□ -1.58
CLHC1-201ENST00000401408 CDCA7Q9BWT1 371 aaPredicted RBP5.17□□□□□ -1.58
CLHC1-201ENST00000401408 TSPYL2Q9H2G4 693 aaPredicted RBP5.17□□□□□ -1.58
CLHC1-201ENST00000401408 PREX2Q70Z35 1606 aa5.17□□□□□ -1.58
CLHC1-201ENST00000401408 FAM193AP78312 1265 aa5.17□□□□□ -1.58
CLHC1-201ENST00000401408 CCDC181Q5TID7 509 aa5.17□□□□□ -1.58
CLHC1-201ENST00000401408 FTSJ3Q8IY81 847 aaKnown RBP5.17□□□□□ -1.58
CLHC1-201ENST00000401408 SAMD9LQ8IVG5 1584 aa5.17□□□□□ -1.58
CLHC1-201ENST00000401408 CDK12Q9NYV4 1490 aaPredicted RBP5.17□□□□□ -1.58
CLHC1-201ENST00000401408 PPFIA4O75335 1185 aa5.16□□□□□ -1.58
CLHC1-201ENST00000401408 CSB-PGBD3P0DP91 1061 aa5.16□□□□□ -1.58
CLHC1-201ENST00000401408 FOXD4Q12950 439 aaPredicted RBP5.16□□□□□ -1.58
CLHC1-201ENST00000401408 RBM46Q8TBY0 533 aaKnown RBP5.16□□□□□ -1.58
CLHC1-201ENST00000401408 INO80Q9ULG1 1556 aaPredicted RBP5.16□□□□□ -1.58
CLHC1-201ENST00000401408 VGFO15240 615 aaPredicted RBP5.16□□□□□ -1.58
CLHC1-201ENST00000401408 MAP3K13O43283 966 aa5.16□□□□□ -1.58
CLHC1-201ENST00000401408 CREB3O43889 395 aa5.16□□□□□ -1.58
CLHC1-201ENST00000401408 ZNF16P17020 682 aaPredicted RBP5.16□□□□□ -1.58
CLHC1-201ENST00000401408 DPH6Q7L8W6 267 aa5.16□□□□□ -1.58
CLHC1-201ENST00000401408 SMC5Q8IY18 1101 aa5.16□□□□□ -1.58
CLHC1-201ENST00000401408 VTI1AQ96AJ9 217 aa5.16□□□□□ -1.58
CLHC1-201ENST00000401408 METTL14Q9HCE5 456 aaKnown RBP5.16□□□□□ -1.58
CLHC1-201ENST00000401408 MAGEC2Q9UBF1 373 aaPredicted RBP5.16□□□□□ -1.58
CLHC1-201ENST00000401408 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.16□□□□□ -1.58
CLHC1-201ENST00000401408 ARHGAP5Q13017 1502 aa5.16□□□□□ -1.58
CLHC1-201ENST00000401408 LRRIQ1Q96JM4 1722 aa5.15□□□□□ -1.58
CLHC1-201ENST00000401408 NPHP4O75161 1426 aaPredicted RBP5.15□□□□□ -1.58
CLHC1-201ENST00000401408 IRX5P78411 483 aaPredicted RBP5.15□□□□□ -1.58
CLHC1-201ENST00000401408 NAALADL2Q58DX5 795 aa5.15□□□□□ -1.58
CLHC1-201ENST00000401408 RTL5Q5HYW3 569 aaPredicted RBP5.15□□□□□ -1.58
CLHC1-201ENST00000401408 MTA3Q9BTC8 594 aa5.15□□□□□ -1.58
CLHC1-201ENST00000401408 HCSTQ9UBK5 93 aa5.15□□□□□ -1.58
CLHC1-201ENST00000401408 COG6Q9Y2V7 657 aa5.15□□□□□ -1.58
CLHC1-201ENST00000401408 ROBO1Q9Y6N7 1651 aa5.15□□□□□ -1.58
CLHC1-201ENST00000401408 CDC42BPAQ5VT25 1732 aa5.15□□□□□ -1.59
CLHC1-201ENST00000401408 SH3BP5O60239 455 aa5.15□□□□□ -1.59
CLHC1-201ENST00000401408 KRBA2Q6ZNG9 492 aa5.15□□□□□ -1.59
CLHC1-201ENST00000401408 CCER1Q8TC90 406 aaPredicted RBP5.15□□□□□ -1.59
CLHC1-201ENST00000401408 GPATCH3Q96I76 525 aa5.15□□□□□ -1.59
CLHC1-201ENST00000401408 ESF1Q9H501 851 aaKnown RBP5.15□□□□□ -1.59
CLHC1-201ENST00000401408 PHF14O94880 888 aa5.14□□□□□ -1.59
CLHC1-201ENST00000401408 ZFYVE27Q5T4F4 411 aa5.14□□□□□ -1.59
CLHC1-201ENST00000401408 PBXIP1Q96AQ6 731 aa5.14□□□□□ -1.59
CLHC1-201ENST00000401408 CALR3Q96L12 384 aaKnown RBP5.14□□□□□ -1.59
CLHC1-201ENST00000401408 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP5.14□□□□□ -1.59
CLHC1-201ENST00000401408 TROQ12816 1431 aaPredicted RBP5.14□□□□□ -1.59
CLHC1-201ENST00000401408 CEP350Q5VT06 3117 aa5.14□□□□□ -1.59
CLHC1-201ENST00000401408 FAM135AQ9P2D6 1515 aa5.14□□□□□ -1.59
CLHC1-201ENST00000401408 LRP6O75581 1613 aa5.13□□□□□ -1.59
CLHC1-201ENST00000401408 PARNO95453 639 aaKnown RBP5.13□□□□□ -1.59
CLHC1-201ENST00000401408 SBNO2Q9Y2G9 1366 aa5.13□□□□□ -1.59
CLHC1-201ENST00000401408 PZPP20742 1482 aa5.13□□□□□ -1.59
CLHC1-201ENST00000401408 COL16A1Q07092 1604 aaPredicted RBP5.13□□□□□ -1.59
CLHC1-201ENST00000401408 CCDC194A0A1B0GVG4 234 aa5.13□□□□□ -1.59
CLHC1-201ENST00000401408 CCER2I3L3R5 266 aa5.13□□□□□ -1.59
CLHC1-201ENST00000401408 TBC1D12O60347 775 aa5.13□□□□□ -1.59
CLHC1-201ENST00000401408 PAX3P23760 479 aa5.13□□□□□ -1.59
CLHC1-201ENST00000401408 ARID4AP29374 1257 aaPredicted RBP5.13□□□□□ -1.59
CLHC1-201ENST00000401408 RINLQ6ZS11 566 aa5.13□□□□□ -1.59
CLHC1-201ENST00000401408 PARP9Q8IXQ6 854 aa5.13□□□□□ -1.59
CLHC1-201ENST00000401408 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP5.13□□□□□ -1.595e-7■□□□□ 10.4
CLHC1-201ENST00000401408 PNMA2Q9UL42 364 aa5.13□□□□□ -1.59
CLHC1-201ENST00000401408 RPS6KL1Q9Y6S9 549 aa5.13□□□□□ -1.59
CLHC1-201ENST00000401408 NLRP1Q9C000 1473 aa5.13□□□□□ -1.59
CLHC1-201ENST00000401408 ATP7AQ04656 1500 aa5.13□□□□□ -1.59
CLHC1-201ENST00000401408 MAP3K1Q13233 1512 aa5.13□□□□□ -1.59
CLHC1-201ENST00000401408 KDM5DQ9BY66 1539 aa5.13□□□□□ -1.59
CLHC1-201ENST00000401408 VARS2Q5ST30 1063 aaKnown RBP5.12□□□□□ -1.59
CLHC1-201ENST00000401408 ANKLE2Q86XL3 938 aa5.12□□□□□ -1.59
CLHC1-201ENST00000401408 PMM1Q92871 262 aa5.12□□□□□ -1.59
CLHC1-201ENST00000401408 SPOCK3Q9BQ16 436 aa5.12□□□□□ -1.59
CLHC1-201ENST00000401408 BCL2L13Q9BXK5 485 aa5.12□□□□□ -1.59
CLHC1-201ENST00000401408 SETBP1Q9Y6X0 1596 aa5.12□□□□□ -1.59
CLHC1-201ENST00000401408 ADGBQ8N7X0 1667 aa5.12□□□□□ -1.59
CLHC1-201ENST00000401408 hCG_2014768A0A024R1R8 64 aa5.12□□□□□ -1.59
CLHC1-201ENST00000401408 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP5.12□□□□□ -1.59
CLHC1-201ENST00000401408 IGBP1P78318 339 aa5.12□□□□□ -1.59
CLHC1-201ENST00000401408 MYBPC2Q14324 1141 aa5.12□□□□□ -1.59
CLHC1-201ENST00000401408 WDR78Q5VTH9 848 aa5.12□□□□□ -1.59
CLHC1-201ENST00000401408 TSHZ1Q6ZSZ6 1077 aa5.12□□□□□ -1.59
CLHC1-201ENST00000401408 TMA7Q9Y2S6 64 aaKnown RBP5.12□□□□□ -1.59
CLHC1-201ENST00000401408 A2MP01023 1474 aa5.12□□□□□ -1.59
CLHC1-201ENST00000401408 UGGT1Q9NYU2 1555 aa5.12□□□□□ -1.59
CLHC1-201ENST00000401408 SHPRHQ149N8 1683 aa5.11□□□□□ -1.59
CLHC1-201ENST00000401408 TNRQ92752 1358 aa5.11□□□□□ -1.59
CLHC1-201ENST00000401408 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP5.11□□□□□ -1.59
CLHC1-201ENST00000401408 EIF3JO75822 258 aaKnown RBP5.11□□□□□ -1.59
CLHC1-201ENST00000401408 HOXB1P14653 301 aaPredicted RBP5.11□□□□□ -1.59
CLHC1-201ENST00000401408 ANKRD13DQ6ZTN6 518 aa5.11□□□□□ -1.59
CLHC1-201ENST00000401408 ZBTB47Q9UFB7 747 aaPredicted RBP5.11□□□□□ -1.59
CLHC1-201ENST00000401408 SALL2Q9Y467 1007 aaPredicted RBP5.11□□□□□ -1.59
CLHC1-201ENST00000401408 PHLPP1O60346 1717 aa5.11□□□□□ -1.59
CLHC1-201ENST00000401408 APLP1P51693 650 aa5.11□□□□□ -1.59
CLHC1-201ENST00000401408 GSE1Q14687 1217 aa5.11□□□□□ -1.59
CLHC1-201ENST00000401408 LARGE2Q8N3Y3 721 aa5.11□□□□□ -1.59
CLHC1-201ENST00000401408 GIPC2Q8TF65 315 aa5.11□□□□□ -1.59
CLHC1-201ENST00000401408 CHMP4BQ9H444 224 aaKnown RBP5.11□□□□□ -1.59
CLHC1-201ENST00000401408 LRP5O75197 1615 aa5.1□□□□□ -1.59
CLHC1-201ENST00000401408 ARHGAP23Q9P227 1491 aa5.1□□□□□ -1.59
CLHC1-201ENST00000401408 MIA2Q96PC5 1412 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms